ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457146 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◣ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

PDXK
ALDH18A1
WDTC1
SLC39A10
DDX17
STRBP
EIF4G2
SLC25A25
NAIF1
EPC2
HNRNPA2B1
CBX3
WASF2
SEPTIN7
GABARAP
PHF23
DVL2
ELP5
CTDNEP1
NUDT3
GSK3B
KCNK4
GPR137
BAD
RSF1
AAMDC
ARID3B
RPGRIP1L
FTO
FAM72D
FAM72C
MSMO1
USP49
RPS6KC1
LY6L
SRSF1
DDX42
CCDC47
UAP1L1
MAN1B1
FCGR1A
SERPINI1
PDCD10
RHOBTB2
MDM2
DAGLA
PGLYRP4
SMARCD2
SERPIND1
GPR182
PDZK1IP1
SEPTIN5
GP1BB
FANCA
ATG16L2
DUX4
XPO7
DOK2
TEX28
SULT2A1
OPN1MW3
OPN1MW2
OPN1MW
FAM72A
ART1
WBP2
PTPRF
PMS1
ORMDL1
AVEN
MEMO1
INMT
MINDY4
ASIC3
MOB1B
RHCE
MTRNR2L1
AURKAIP1
WWOX
RELN
INO80C
HNRNPF
SNAP29
PI4KA
MAN2A2
WNK1
PPP6R1
NFU1
CAPRIN2
DRC7
FXYD3
UBE2H
INTS10
TMEM59
TCEANC2
PRAME
NXF3
PHF19
ZNF117
ERV3-1-ZNF117
ERV3-1
FAM72B
PPP1R15A
PLEKHA4
SPTAN1
SLC6A9
LAMB1
TRIM67
TSHZ2
MACC1
DICER1
TMEM72
BACH2
DENR
C1orf116
RNF168
SMCO1
ARL4D
E2F6
ADARB1
RTN4
YJU2
IL36A
DHRS3
RAB33A
PRKAB1
AIFM1
ADGRL1
CDK12
MED1
ERMN
FRG2C
OR2C1
CSTF2
MGAT5
EPB41
AVPR2
PXN
RNF10
KANSL3
FER1L5
PTPRH
RHD
ZNF33B
RFX1
RBM8A
CFAP36
ZNF852
PSMD5
TBL1X
CMIP
KIAA1586
MARCHF2
RNF144A
TJP3
TRUB2
COQ4
SLC45A3
CLUL1
RHOC
OAZ2
PI16
HDAC6
SLC4A1
ZNF77
GRIN1
BTNL9
TRIM37
CEP43
CLTRN
ARMC8
CTBS
NFE2
TTC26
ZNF347
NCAPD2
MRPL51
RNF223
LIMS1
PCIF1
ZNF451
SYT7
KMT2E
NEXN
XRCC5
VIM
BCL3
ZBTB7B
LENEP
KDSR
SSH1
DCLRE1B
AP4B1
TRIM63
TMEM248
ABCB10
NR4A1
ZNF718
ZNF595
MAP3K1
HDHD3
OR10V1
UBE2F
ST3GAL4
WDR74
STX5
TNPO3
SPINK4
SCN9A
THEMIS2
KLHL22
NXT2
GYPE
MFSD12
CENPF
KRT10
PAXBP1
SRCIN1
IL1R1
EMILIN2
GLIPR1L1
CAPS2
TMEM120A
VWA7
BIRC2
CASS4
KDM3A
GTF3C2
HSF5
ZNF497
A1BG
STK11
SEPTIN9
PHRF1
ITLN2
OAZ1
VILL
JSRP1
LAPTM4B
TBL2
PLSCR1
TANGO2
ARVCF
SNAI3
PRDM11
ARID1A
ATAD2
ALAS2
RAB32
SYF2
BTNL10
LZTR1
ANKRD33
CASC3
CXXC5
CCDC88B
GBA
EML2
PTEN
KLLN
KLF2
ZFAT
ZNF408
ARHGAP1
LEPROT
LEPR
TCP11L2
TNFAIP8
PTCD3
POLR1A
ADAMTSL4
NUPR2
CHCHD2
TMEM275
KNCN
TSPAN32
C11orf21
PPM1F
ZNF609
FKBP8
SLC43A3
CPOX
GYPB
COLGALT2
DNMT3B
COMMD7
P2RX6
SCN1B
HPN
RASA4
NUP214
RCHY1
NR4A3
TMEM18
MFAP3L
GDPD5
CD300LF
RPS11
RPL13A
GUCA1B
H4C4
H3C4
H2BC6
TXNDC2
TYMP
ODF3B
KLHDC7B
LOC102724770
DGCR6
OR10AC1
NUDT1
MRM2
MAD1L1
LMLN2
TPM4
CEBPE
TSC1
GFI1B
TM7SF3
MED21
PYCR2
BTG2
WDR89
ANKRD61
CRKL
ZFPM2
H4C8
ABO
NARF
TREM1
TEN1
ACOX1
ZNF165
OR1F12
MIER1
DNAI4
NDUFS7
DNAJB2
GNB2
SLC26A8
MAPK14
TNFAIP3
NPR1
ILF2
EIF2AK1
UBAC1
CSF1
VSIG10L
ETFB
PSIP1
DIP2A
DNAJB12
FBXW11
TMOD1
MBD2
PRDX1
SLFN14
FUT10
ZNF30
CCDC200
PPP1R14D
RNF217
GOLGA8B
C6orf47
BAG6
APOM
PRDM8
ALOX12
USP11
PPIL2
TUBA1C
AP1G1
KCNN4
HMOX1
ARID2
H1-0
GCAT
NRCAM
GOLGA7B
SIRT1
PLSCR2
EEF1AKMT3
METTL1
CYP27B1
KRT8
SLC7A8
PDE4DIP
FOXN1
KLHL20
HAGH
FAHD1
C3orf86
CLK3
TUBGCP5
BCL6
KRBA1
GTF2H4
VARS2
ASCC1
ANAPC16
COL18A1
SDE2
CHSY1
FAM83A
PIK3R3
PDE4C
CXCL6
ZDHHC6
VTI1A
SF3A3
RINL
FHL3
SLC35E2A
C6orf89
NOS3
UFD1
CDC45
SAMD4A
HDAC11
RTBDN
MAST1
ZNF669
CCNI
RBPJ
ST6GAL1
NOP16
HIGD2A
BCL7B
PRPF38A
ORC1
PXT1
KCTD20
YIF1B
KCNK6
EIF4A2
GDE1
CCP110
SUPV3L1
FKBPL
ATF6B
TMEM191C
HTR4
UCP3
MFSD2B
SPIDR
THAP7
WASHC2C
EHD1
FZD1
HECTD3
POLR2J3
SNRPE
BRWD1
MSANTD1
CCRL2
TENT5C
ORAI2
UBE3B
KCTD10
NECTIN4
CORO1C
KIF3B
KLHDC9
ATP2C1
NPHS1
KIRREL2
BSG
BNIP3L
ERCC6L2
ZC3HAV1L
RNF224
SLC34A3
TUBB4B
TPP1
TAF10
TRIM3
TIMM10B
SVBP
ERMAP
RRP8
ILK
CRYBG1
ANKFY1
RASA4B
CNKSR3
CD164
CLPTM1
APOC2
NBEAL2
CCDC12
IRF2BP2
SEC22C
USP21
PPOX
SS18L2
GOLM2
LYL1
ADAMTS14
BRPF1
ASIC4
SOCS2
NDUFS3
KBTBD4
FAM180B
DYNC2I1
ESYT2
NSD2
MYCL
TRIT1
ZNF510
FAM110A
FABP6
CACTIN
RBM39
TNFRSF1A
RAB33B
MAGEA11
CSE1L
COL1A1
IL1RL1
ID2
TOM1L2
DRC3
ASF1B
TRAPPC9
HSPA1L
HSPA1A
TUBE1
FAM229B
LSM2
BAIAP2
TMEM107
IL13
C5AR1
ISOC2
ZNF628
PIH1D2
NKAPD1
ALG14
RIPOR3
THAP9
SEC31A
ZNF74
GP6
CCM2
QRICH1
PITHD1
ARSD
UBE2L3
TAF12
WWP1
PRKCI
PAF1
MED29
REXO4
ADAMTS13
UBC
HEMGN
RBBP5
VPS52
RPS18
B3GALT4
GPR42
HEPH
TXN2
UBE2B
CDKL3
SPATA24
PROB1
SLC2A1
DDIT4
TFR2
SLC25A11
RNF167
PFN1
GP1BA
ENO3
JMJD1C
SRA1
SLC35A4
APBB3
RTN3
ATL3
TTC12
ACSL5
CCDC97
CDC42EP1
RPA2
VPS13B
GUK1
GJC2
RSAD2
CSTF2T
MARK3
PSPN
ALKBH7
TMEM69
GPBP1L1
WEE1
GSDME
FOXJ1
SH2B1
H4C14
H3C15
H3C14
H2AC19
H2AC18
RPP25
ITGB3BP
EFCAB7
KLHL18
KIF9
RPUSD2
CCDC32
TMEM94
ATP6V0A2
NOL8
CENPP
INKA2
DDX20
RCC1
ADAR
OBSL1
INHA
RNFT1
GABPB2
C10orf71
LY6G5C
BOD1L2
DUS3L
NRTN
MRPL11
SQSTM1
LPCAT3
UTP18
MBTD1
MAP1LC3B2
SLC25A17
RGS20
STBD1
PCNT
C21orf58
CSPP1
COPS5
KRTAP10-7
KRTAP10-6
DDC
ZMIZ1
PAK1IP1
C6orf52
DHTKD1
DGCR8
MARCHF7
WDR83OS
WDR83
MAN2B1
FAM53C
CDC25C
TBC1D25
ZNF564
NBPF10
CCDC22
RAB42
CA1
ZNF273
USP3
PPP1R14C
CENPC
STAP1
C11orf96
POLA1
CTPS1
H2AX
HMBS
HEXIM2
RPS9
MEST
ATF7-NPFF
ATF7
EGFL7
TPGS1
STAM2
NPL
LGALS4
DCTN2
LCA5
HAPLN2
VAT1
RND2
MST1
PTPN12
EZH1
PDE7A
RRN3
C1orf159
RAP1GAP
BTBD10
IQCH
AAGAB
ATF3
PPP1R15B
GOLGA3
MED15
TCTEX1D4
PLK3
BTBD19
IREB2
RIMBP3C
RIMBP3B
IFITM3
RPS26
ZMYND8
SLC33A1
EIF1AD
CST6
BANF1
PRR5
COQ10B
RCSD1
PRC1
TBX18
STAT6
TRIM69
ACSM1
TCFL5
PSMD10
ATG4A
SPATC1L
TCTEX1D1
STX1A
KCNH2
PARK7
CDC5L
NLGN3
C5orf15
TIPRL
TXNDC11
ISY1-RAB43
ISY1
FAM210B
PLAAT2
HOXB9
MTBP
MRPL13
KCNJ11
SUPT7L
SLC4A1AP
TRMT2A
RANBP1
AGPAT1
TMPO
SIL1
ATXN7L2
CYB561D1
MRPL54
APBA3
C9orf16
ECH1
NYAP1
NEU1
RHAG
C2orf50
BAHCC1
H4C3
H1-6
PPARD
NME1
GDAP1
TXNIP
BAZ1B
ATP8B2
AQP10
MRPL35
IMMT
PRRC2A
AIF1
BHLHE40
SMG7
ACSF3
PISD
USP6NL
MRRF
PSME3
BECN1
CALM2
VMAC
NDUFA11
ABCF1
TOP3B
HERC1
ERVH48-1
TNXB
RGS14
LMAN2
ATAD3A
TPR
ODR4
PPP1R12B
POLD4
MYBPHL
DIPK1A
RPL11
SIGLEC12
PPP1R12A
APOBEC1
CYP3A43
GTF2B
SLC25A42
METTL25
CCDC59
CCNG2
CFAP20
CRB1
DAGLB
EXOSC9
ELF3
GTF2IRD2
GTF2IRD2B
TRMT10A
MTTP
PARP16
ZNF467
SAT1
ETFRF1
CFAP94
EPS15
GAS8
DBNDD1
TRIB1
DUSP1
TRAPPC4
RPS25
DPEP3
DPEP2
PRR29
ICAM2
UROS
BCCIP
C2orf88
QSOX2
TMCO6
NDUFA2
IK
HEXB
HCN2
CD14
S100Z
LRRIQ3
FPGT-TNNI3K
FPGT
CD2
PCYT1A
SPDYE14
SPDYE10P
CASTOR2
ZC3HC1
MRPL40
HIRA
DSTYK
ZNF556
MAMDC2
FRG2
DOK3
DDX41
FDXACB1
C11orf1
ALG9
MRPS16
DNAJC9
TMEM87B
PDCD6IP
KSR1
SMIM41
ATG101
ZCCHC14
PTP4A2
PRR35
PIGQ
NHLRC4
GP9
BSDC1
SH3BGR
LCA5L
HUS1B
RRP15
MRPL27
EME1
KLF3
RAMP2
RUNX1T1
YARS2
EAPP
JOSD2
ASPDH
RAPGEF5
YARS1
S100PBP
E2F1
TMCC2
UTP3
TUBB
MDC1
RBMX
C1orf226
GAGE2B
PPP4R3B
SPATA46
TMC8
TMC6
IQUB
TOR4A
RHOT1
CCR7
MTHFR
CLCN6
MYL12A
MRPL48
H2AZ2
DHDH
SLC7A2
EVA1B
GNA12
NCOA4
HOMEZ
NUP210L
AP1M1
ATF4
ZBTB45
SLC27A5
SSBP1
CEP85L
ZNF474
NR1H3
ACP2
TSSK2
DGCR2
ZNF576
IRGQ
COMT
SSBP2
PAFAH2
WDR46
RGL2
PFDN6
TMEM9
TXNRD2
PDAP1
BUD31
ST7
MAD2L1BP
GTPBP2
H4C12
H4C11
H2BC14
H2AC14
CLP1
TRIM6-TRIM34
TRIM6
TMEM183A
CTR9
IL19
YPEL4
PRPSAP1
SCMH1
TLE2
IL10
TAS1R1
NOL9
NBPF1
ZNF813
ETFA
ZNF335
MAPKAPK3
CISH
TNFRSF1B
TRIB3
VENTX
TEX46
KDM1A
RCOR3
USP9X
TUBB1
HDC
HYLS1
GSE1
TEAD2
DKKL1
LARS2
PPM1D
ARF3
IFT172
GCKR
FNDC4
THEM4
MAMSTR
LRRC23
SELPLG
FAM240C
SELENOH
ISG20