ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5930121 | Acute myeloid leukemia
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◣ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX20532176: hESC H1

◢ SRX20532177: hESC H1

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MAMDC2
HEXA
WASHC2C
WASHC2A
AP5Z1
LAMP1
PRR5L
COMMD9
DUX4
ZNF718
ZNF595
DMPK
DMWD
GET4
HIP1
ASAP1
NCF1
SPDYE13
CYTH3
FIGNL2
RAD9A
PPP1CA
STX1A
RNASEH2C
KAT5
MMP9
UBE2Q1
CHRNB2
SPDYE17
SPDYE9
SPDYE8
SPDYE15
SPDYE11
EXT1
ATP6V0D1
AGRP
DGKZ
ARHGEF12
EZH1
RAMP2
PDXK
LMO2
CYB561
SYT15
RPS9
KLF2
PRAM1
NLRP12
PMF1-BGLAP
PMF1
ITGB2
RNF149
MTHFR
CLCN6
SPNS1
ZNF358
MCOLN1
TPM4
ARHGAP31
HELZ2
BPI
CD82
GPR132
BAX
PHACTR3
SUN1
CLCN7
LUZP1
METTL9
SLC37A3
RAPGEF1
AOAH
TMEM104
NAT9
EGFLAM
NFX1
USP3
CD300A
TEAD3
KIAA0513
HNRNPF
STAB1
CCL4L2
LMBR1
NCR3
LTB
LST1
RPS6KA1
MXRA7
METTL23
IKZF3
ARID3B
MYEOV
MTRNR2L1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
ERBB2
GABARAP
MRPL11
PNMT
PHF23
DVL2
MIEN1
GRB7
ALDH18A1
HNRNPA2B1
CBX3
LOC102724770
DGCR6
SLC39A10
ELP5
CTDNEP1
WDTC1
SLC45A4
EPC2
DDX17
EIF4G2
STRBP
NUDT3
BHLHE40
FRG2C
TES
TMEM199
SEBOX
POLDIP2
SLC25A25
NAIF1
SEPTIN7
ART1
KIF5C
TCAP
WASF2
MRPL45
ERAL1
TSPAN31
ID1
KCNK4
HAGH
FAHD1
GPR137
BAD
MUC3A
SSH3
MARCHF9
ERCC1
SPATA25
NEURL2
CTSA
IRS2
CDK4
SFSWAP
POLR2J3
SERPIND1
PGAP3
GSK3B
ZSWIM1
TET3
UVRAG
NAGPA
DHRS3
CD300LF
RSF1
AAMDC
SPATC1L
LAT
MSMO1
CRBN
LTBP2
ARL4D
RBBP8NL
GRHL2
UBE3B
KCTD10
DAGLA
RGPD2
RGPD1
RPGRIP1L
FTO
TRMO
RBM48
PEX1
MTRNR2L9
MED11
PSMD3
ASB2
MTBP
MRPL13
SUPT7L
SLC4A1AP
MDM2
PTPRF
PDE4DIP
SEPTIN9
RALGDS
BCL3
TXNRD1
CCDC200
RPS6KC1
FAM72D
FAM72C
SUMF1
RPUSD4
FAM118B
SKIL
WBP2
IL1R1
NECTIN4
ZBTB7B
LENEP
RAE1
MTRNR2L3
SLC35B1
ATF3
EFNA3
STAT6
SYNGAP1
PHF1
CUTA
SPIDR
LY6L
STARD3
PPP1R1B
HES1
TNS3
SCHIP1
C8orf33
TOMM22
SMARCD2
USP49
C1orf174
THAP7
ZZZ3
DDX42
CCDC47
SRSF1
TBL1X
ISY1-RAB43
ISY1
RIOK2
MEOX1
ILF3
ABCC10
TRIB1
TRIM48
POLR3F
DZANK1
RAPGEF3
FRG2
SOCS2
RBBP5
RXRA
SERPINI1
PDCD10
ELF3
TOX2
HOOK2
ANGPTL4
CDKN1A
STX16
GBA
UBE2H
TSR3
GNPTG
GPRC5A
LZTR1
SPTAN1
ATP6V1G1
VPS50
HEPACAM2
UAP1L1
MAN1B1
MACC1
POLR2J
UNC13D
TRIOBP
RARB
UNKL
SQSTM1
CD55
POLR2J2
NOL4L
APOBEC3B
GADD45A
ATG16L2
VPS33A
ESRP2
FOXJ1
RHOBTB2
LIMA1
INO80C
YJU2
ZNF335
TRIM29
TMC7
FLOT2
DHRS13
PIP4P1
OSGEP
APEX1
SLC35A5
ATG3
IRF2BP2
TRMT2A
RANBP1
METTL25
CCDC59
IDH3B
ATAD2
PSMB7
SUPT6H
SDF2
AVEN
OPN1MW3
OPN1MW2
OPN1MW
LAMA3
PGLYRP4
CARD16
ZBTB7C
FANCA
EN2
CLPTM1
APOC2
AURKAIP1
SUPV3L1
SKIDA1
CYP27C1
GOLM2
SMYD1
TFPT
PRPF31
SPINK1
SNRPE
EAPP
SMN2
SMN1
DMAC2
PPCDC
NOTCH2NLC
GET3
ANXA2
LYPD6B
MOCS3
DPM1
GSR
RDH5
ITGA7
BLOC1S1
PISD
SPIRE2
RIPOR3
ERICH4
PHRF1
REN
TRA2B
WDR74
STX5
IRF2BPL
VIRMA
CYP2A13
LGALS8
RGS3
RPS26
C5orf51
CDKAL1
PDGFB
MRTO4
EMC1
PLAGL1
CSF3
SALL4
ELFN2
NOXO1
WASHC5
NSMCE2
FCGR1A
PCIF1
SLC25A11
RNF167
PFN1
TBRG4
BCKDK
PURB
FXYD3
MYCL
ZNF408
ARHGAP1
ARID3A
TRAF4
UPP1
DAZAP1
XPO7
DOK2
SLC25A53
FAM199X
NUP214
PDAP1
BUD31
SRI
NME1
YAP1
CLN3
APOBR
TSFM
HPS5
GTF2H1
TBC1D30
TOP3A
SMCR8
PAXBP1
SENP1
PFKM
SLC25A45
FRMD8
GFM1
PDZK1IP1
ZNF789
ATP5MF-PTCD1
ATP5MF
TBL2
GLTP
TPP1
TAF10
MRPS7
MIF4GD
GGA3
RDX
CDK12
CEP162
ZDHHC6
VTI1A
RMND5B
TMEM205
RAB3D
CCDC159
FAM72A
TEX28
ITGB5
CASC3
KMT2E
ATP6V0C
AMDHD2
KLF9
C16orf91
SAP30BP
RECQL5
BRF1
TRMT1
NACC1
SLIRP
OSER1
ALKBH1
IER3
FLOT1
MMP13
MFSD1
UXS1
PPP6R1
DOK7
PTK2
ZSCAN22
U2SURP
ENTPD4
RARG
TMCO6
NDUFA2
IK
C8orf74
ZNF165
OR1F12
ASIC3
TXN2
ZNF585B
ZNF383
INMT
CORO7-PAM16
CORO7
WSB2
AXL
PRICKLE1
SPAG16
ZSCAN25
GPR182
CELA3B
SUSD4
TAS1R1
NOL9
PRKAG2
KAT8
SLC4A2
CDK5
MIER1
DNAI4
SRP9
BIRC2
GATB
KALRN
ZBTB45
WWOX
SLC27A5
FNTA
ANXA10
DOK3
DDX41
MB
FZR1
TJP2
TMEM40
EIF2D
SMG7
MYLK2
GNS
RHEBL1
OSBPL2
CCDC88B
KRT1
MED1
NOTCH2
PMS1
ORMDL1
TJAP1
SUPT4H1
KRR1
MINDY4
CCNT1
SSUH2
ZMYND8
KIF25
ST7
JMJD7-PLA2G4B
JMJD7
ERAP1
RTF2
NDUFA4
PSMA1
VAC14
GP1BA
MRPS15
KLF6
EEF1AKMT3
KCNMA1
EPHB3
SHLD2
GLUD1
TRIP4
PCLAF
HUS1
UBE2B
CDKL3
SLC16A5
HERC3
JUNB
DENND2B
KRT31
PNP
FAM83A
PHAX
ALDH7A1
KLF10
GRAMD2B
FRMPD1
DNAJC11
RAD51AP1
ECH1
C12orf4
RNF223
NAPB
SEPTIN5
INTS10
GP1BB
SPRED2
E2F6
MLLT10
PXN
DOHH
DERL3
DICER1
ZNF576
TRIM16L
IRGQ
PTPRR
TM2D2
ADAM9
BUB1B
PLEC
PSME3
BECN1
PTBP1
ZNF668
ZNF646
NOTCH2NLB
SSBP1
DIP2A
LRRC47
FGGY
RPS5
FSCN1
ARHGAP32
STAU2
A1BG
GSC2
RGS20
MEMO1
UBE3C
BCL2L13
HR
CSRNP1
SLC35F6
NUP107
ARID5B
CCDC97
MOB1B
TMEM63A
RBPJ
OAZ1
COL23A1
PTPN6
C12orf57
SPHK2
TNNC2
MEF2C
HMOX1
UBE2I
ANKS6
RRP15
PLA2G4B
NGB
SUMO3
RHCE
NGDN
KANSL3
FER1L5
ATG9B
ABCB8
SLCO4A1
ADGRB3
NOTCH2NLA
UBAP1
TNC
HNRNPH2
GLA
ITGB3BP
EFCAB7
TGFB2
BANP
SEMA3B
LSMEM2
GRAMD1C
ZNF497
UBAP2L
C1orf43
C19orf33
TIPARP
CALML5
THOP1
SGTA
PASD1
USP30
PPWD1
ETV4
CENPK
SEMA5B
TBC1D2
WDR62
THAP8
SULT2A1
HOXC13
THEMIS2
UBQLN1
BIRC3
SSH1
CMIP
ADAMTS14
B4GALT2
METTL1
CYP27B1
ACVR1B
PDCD6IP
SH3GL1
LRFN4
CHAF1A
SLC33A1
THRAP3
GPATCH3
LANCL2
ARID2
BAIAP2
CLSTN1
VASH2
RELN
ATG14
ALLC
SYBU
EIF5A2
RPTOR
KYAT1
SCRN2
DHX35
PMEPA1
NUGGC
ELP3
RETNLB
EPS8
MAGEB10
HM13
ZNF514
ZNF2
OR9A4
H2BW2
GAMT
TMEM262
COMMD3-BMI1
COMMD3
BMI1
TCF24
RFX1
NKD2
BSG
NDUFS7
REEP4
MYL12A
SF3A3
NEK6
BMS1
XRCC5
ADARB1
RNPEPL1
GPN2
DUSP28
ANKMY1
SEC13
PSMD1
CXCL17
SLK
LRRC29
CACTIN
PPP1R11
PLD1
DENR
TACC1
PHTF2
LASP1
TEX46
LPCAT3
VWA7
SMARCA4
STMN3
RTEL1
PYURF
PIGY
MRPS11
MRPL46
MAP3K7
FOXO6
TMEM116
ERP29
ADGRL1
ALG6
TMEM248
TGIF1
TANGO2
IGLL5
ARVCF
TMCC3
PARD6B
VPS11
SLC6A9
SNX21
NDST1
EPB41L1
CPA1
SUMO2
C5orf63
NUDCD3
KRT86
ECHDC1
NOP16
HIGD2A
AAAS
SCAMP5
NFE2
LSG1
OAZ3
TIMM23
HEYL
NIBAN2
DPH2
ATP6V0B
BCAS1
PLEKHG3
DUSP6
TSN
SRCIN1
RINL
KDM7A
RPL23A
RAB34
PROCA1
PMEL
ADAM23
UBE2L3
CRTC1
DDX23
MBNL1
DBNDD2
HOXA3
ATN1
MRFAP1L1
BLOC1S4
PDE3B
OTUD7A
GRAMD1A
TTC17
FAIM
EFHD2
FEM1A
TNPO3
VGLL4
SMG8
RHOD
CNP
ZNF865
ZNF524
KDM3A
FIZ1
GTF2H4
ARHGEF7
NCBP2AS2
NCBP2
RPLP0
RGS14
RASEF
LMAN2
GSN
GCN1
STRA6
OSBPL7
LRRC46
STYXL1
HNF4A
RABGAP1L
SH2B1
GOLGA7B
PRSS22
NOL8
CENPP
TRUB2
COQ4
RMND1
ARMT1
ZCCHC4
PPP1R15A
POLD4
PTPRN2
EIF3F
PRKRIP1
PSMD5
DGAT2
ZFAT
FAM72B
TMEM242
ARMCX5-GPRASP2
SEC22B
ATP13A3
KMT5C
EIF1AD
DPP3
CST6
BTBD6
BANF1
LDHD
AFF4
C1orf116
FASN
ENO3
FBXO46
RPL18
FAM83E
LNX1
KSR1
DDX46
STX6
PPL
HSPB1
ZNF507
NDUFAB1
PTPRH
KRT80
CYP24A1
ITPK1
DNAJC30
BUD23
PRMT3
ZNF608
PYCR2
ZNF285
PTCH1
QRICH1
STON2
CD109
PLEKHH2
FLYWCH1
SERP1
RBM28
KDM1A
EIF2A
LOC388282
SYNCRIP
COL1A1
TCERG1
LTO1
BAHCC1
NPEPPS
ATP6V1C1
TMEM91
LFNG
TIMM22
NAPA
TSC1
GFI1B
ZHX2
HDAC6
ITGA2
UQCRHL
RARA
CAPRIN2
ITM2C
ATP6V1H
PUS10
PEX13
C6orf47
BAG6
APOM
HOXA4
NEXN
METTL2A
FADD
SART3
RRAGC
ISCU
TMEM18
SBK1
UPK3B
SETD1A
ORAI3
AP5S1
TPRN
TMEM203
NDOR1
EIF2S1
ATP6V1D
LURAP1L
PDE6D
LARP1
COPS7B
NFKBIA
SCYL3
PRAME
PPP1R37
AP2A2
ZGPAT
PPP5D1
NSD1
CALM3
ARFRP1
PLXNB2
PHF19
KMT5B
ABLIM1
PIM3
WDR24
KDM4C
TTC32
RBM39
TMEM59
TCEANC2
TFAP2C
MAIP1
AGTPBP1
TMEM178B
MAN2C1
INTS1
SYNGR3
GFER
KDM2A
CHRM3
CXXC5
TFDP1
ZNF830
CCT6B
DNPEP
NBPF1
CHMP7
BCAR1
MDH2
DUSP2
ASTL
MTUS1