ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976675 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◣ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

IKZF3
MYEOV
ERBB2
MRPL11
MIEN1
GRB7
PNMT
TCAP
MTRNR2L8
ARID3B
TES
MAMDC2
ID1
SLC45A4
SSH3
TMEM199
SEBOX
POLDIP2
MTRNR2L2
MSH3
DHFR
IRS2
SFSWAP
ERAL1
ASB2
KIF5C
MTRNR2L1
STARD3
PPP1R1B
TOX2
CD300LF
IL1R1
RBBP8NL
C8orf33
UBE3B
KCTD10
CRBN
LTBP2
KALRN
SPIDR
TET3
NECTIN4
TOMM22
RAPGEF3
TNS3
BHLHE40
NAGPA
ABCC10
TXNRD1
VIRMA
STAT6
TSR3
GNPTG
APOBEC3B
RBM48
PEX1
GRHL2
SALL4
GSR
GLTP
C1orf174
DUX4
LYPD6B
TRIB1
RIOK2
SLC35B1
PSMD3
ELFN2
IER3
FLOT1
MMP13
SQSTM1
PSMB7
IDH3B
FOXJ1
KRT1
POLR3F
DZANK1
ZBTB7C
C8orf74
MOCS3
DPM1
MRPL45
RGPD2
RGPD1
LAMP1
TMEM178B
CYP2A13
MED11
PHAX
ALDH7A1
GRAMD2B
SUPT6H
SDF2
OSER1
ZNF789
ATP5MF-PTCD1
ATP5MF
SENP1
PFKM
FLOT2
DHRS13
YAP1
EIF5A2
SPNS1
LAT
NOL4L
ITGB5
ANXA10
EIF2D
ANGPTL4
CD55
SPATA25
NEURL2
CTSA
ZSWIM1
SOCS2
IRF2BPL
ELF3
OSBPL2
MTRNR2L9
POLR2J3
RARB
PISD
GPRC5A
SPINK1
DNAJC11
THAP7
ESRP2
MUC3A
UNC13D
BCKDK
KAT8
GATB
TRIM29
RXRA
SAP30BP
RECQL5
FNTA
FOXO6
TMEM207
TRMT1
NACC1
RTF2
LIMA1
CXCL17
RDX
TMC7
REN
PECAM1
PLAGL1
HNF4A
SEMA3B
LSMEM2
PSMD1
MTBP
MRPL13
METTL25
CCDC59
TRIOBP
TFPT
PRPF31
FAM98B
TRAF4
UPP1
HES1
EPYC
SUMF1
CDKAL1
CYP24A1
SERPIND1
DHRS3
MRTO4
EMC1
VAC14
LZTR1
CYP27C1
MUC4
ZNF335
SUPV3L1
ZZZ3
KLF6
RARG
ZMYND8
SIGLEC15
SKIL
POLR2J
CLPTM1
APOC2
CENPBD1
HAGH
FAHD1
SLPI
SPIRE2
CARD16
LANCL2
CD109
RMND5B
MLX
HSD17B1
COASY
ZBTB45
SLC27A5
SLC25A45
FRMD8
AAAS
SYT12
IL1F10
ZNF585B
ZNF383
ATG14
PLD1
SLC35F6
MARVELD1
ISY1-RAB43
ISY1
SLIRP
ALKBH1
CSF3
EPS8
UBE2I
RPTOR
ABT1
HEXA
FAIM
CIPC
TJP2
LTO1
DMAC2
ERICH4
SRI
NKD2
SMG7
KLF9
PGAP3
SUPT7L
SLC4A1AP
DLST
SCHIP1
DOK3
DDX41
UBAP1
KIF25
REEP4
HR
TRA2B
TRIM48
CDKN1A
UXS1
NGDN
ACP3
RBBP5
SART3
ISCU
SEPTIN9
GADD45A
BUB1B
GET3
ERAP1
TMEM205
RAB3D
CCDC159
C5orf63
NAPB
NUP214
SYBU
BCL3
ART1
TRMO
MEOX1
UNKL
C16orf91
CHRM3
LAMA3
MRPS10
ZFYVE26
RAD51B
TXN2
PMEPA1
SPAG16
RHOD
UVRAG
ATF3
SLC25A53
FAM199X
BIRC2
PPCDC
RIPOR3
GFM1
WSB2
RETNLB
SPTLC2
CYP4X1
TGFA
GOLM2
KRT31
SMYD1
AXL
ATP13A3
SULT2B1
ERCC1
TMCO6
NDUFA2
IK
RPS5
SAMD10
PRPF6
TMEM41A
STARD4
UBE2H
KRR1
CLCN5
SLC25A51
SLX4IP
MKKS
GABARAP
ELP5
CTDNEP1
LOC100509620
TRMT12
ACOX3
RAD51AP1
C12orf4
ZNF365
HOOK2
ZNF408
ARHGAP1
JUNB
FEM1A
STX6
SUPT5H
RPS16
ERI1
SGMS2
SMN2
SMN1
RRP15
LSG1
CCND3
TAF8
UPK3B
EDARADD
KIAA0895L
EXOC3L1
E2F4
LOC102723996
ICOSLG
ELMO3
KLF10
RNPEPL1
DUSP28
ANKMY1
NDST1
BCAS1
GPC1
TRIQK
PMEL
MEST
LRRC23
NCAPH2
LMF2
RAB40C
RPS26
PDAP1
BUD31
ZCCHC4
ITGA2
DGAT2
RAE1
MTRNR2L3
HSPB1
KMT5B
PLEKHH2
MTA3
KCNG3
RCOR3
GTSF1L
ATAD2
TOP3A
SMCR8
STX1A
BANP
SCRN2
OSBPL7
LRRC46
ZSCAN25
CSRNP1
ZNF696
RAB11FIP2
ZBTB7B
LENEP
VPS50
HEPACAM2
U2SURP
CACTIN
DBNDD2
EFHD2
SERP1
EIF2A
ANXA2
LGALS8
ZNF576
IRGQ
CSF3R
RNF213
ALOX5AP
UBALD2
MRPS7
MIF4GD
GGA3
SUPT4H1
TACC1
NAB2
TUBG2
PLEKHG3
PRSS22
FXYD3
TSN
MAIP1
MRPL1
NFKBIZ
MRPS15
SPRED2
TPRN
TMEM203
NDOR1
RPLP0
GCN1
MTUS1
NAT1
RDH5
ITGA7
BLOC1S1
UBE2L3
SRP9
FAM83A
ZNF608
FAM133B
MBD6
DDIT3
FAM25G
FAM25C
SLC16A5
SEMA5B
STMN3
RTEL1
NT5C
TRABD
SMIM6
RGS3
WASHC5
NSMCE2
ZDHHC6
VTI1A
TAS1R1
NOL9
EPHB3
PHB2
UQCC1
POLR2J2
PTK2
ZSCAN22
MBNL1
NCBP2AS2
NCBP2
AMN1
NVL
MCCC1
IKBKB
CAV3
TSFM
LRRC47
MAPKAPK5
IGF2BP3
STX16
EPB41L1
PLA2G2A
CAPN14
HABP2
RASSF6
PLEC
BIRC3
TIMM23
TUFT1
ZG16B
ATF6
KCTD5
IRF2BP2
NUDT5
CDC123
METRN
HAGHL
CCDC78
ANTKMT
LDHD
NDUFA9
AKAP3
SELPLG
KLK6
C5orf51
H2BW2
SSNA1
ANAPC2
RRNAD1
ISG20L2
LCN2
CCNT1
EIF3F
STON2
FOS
NCOA3
TIGD5
EEF1D
HUS1
GRAMD1C
ABLIM1
KYNU
HSPBP1
BRSK1
ZBTB38
TIMM23B
PARG
WDR70
NUP155
KMT2E
TMEM248
SMG8
INTS1
REXO1
ZFHX3
SPDYE2B
SPDYE2
UPK3BL1
VCAM1
KYAT1
RAB3IP
LRRC8A
MAGOH
KCNJ14
GRWD1
ZP3
MYNN
ACTRT3
CTNNA1
PAXBP1
RPS14
NPM2
GSDMD
LIPK
DNAJC30
BUD23
SETD1A
ORAI3
PPARD
LRCH4
FBXO24
DPH7
KRT80
TTC32
TIMM50
KMT2A
ARL14EPL
LRRC29
METTL27
TMEM270
PTPRB
GABRR1
PKP2
SPARCL1
PGP
BRICD5
IP6K3
CASKIN1
LRP6
TCF7
CCDC88B
ZNF514
ZNF2
SEC13
DDX46
DNAJB12
MINK1
AGPAT2
TPST2
SPINT2
PLEKHA7
PPP1R14A
HNMT
POLD4
ALKBH3
AQP6
AQP5
ANO6
ECH1
BAHCC1
RPEL1
TGFBR2
NR2F1
BMP3
RAB44
TRMT2A
RANBP1
DOK7
KDM2A
DNAH5
CDH18
CPSF1
CCDC124
SLC39A4
GJB5
GJB4
TBRG4
PDCD6IP
ECHDC1
PUS10
PEX13
GTF3C5
MRPL53
MOGS
FBXO32
LY6D
ING4
DPP3
BRPF1
PMPCB
PTK2B
EFCAB14
CCDC97
TEFM
EFR3A
THRA
CCSER1
SPTLC1
YJU2
PRKAG2
SLCO4A1
MAP3K7
ZGPAT
ARFRP1
BCAR1
DUSP2
ASTL
NAPRT
MROH6
FANCD2
CPA1
ZNF497
A1BG
PHTF2
POMZP3
PEPD
TMEM60
GRK7
D2HGDH
LSM14B
CASC3
PDE6D
COPS7B
NUS1
SLC31A1
FKBP15
BCL2L13
UBQLN1
CNP
RPS9
ATP6V1E1
TSEN34
SNRPC
HAX1
LIN52
ALDH6A1
CDC42EP4
NAALADL2
PIM3
ABCC3
WNT7B
PSME3
BECN1
TTC17
RASEF
KPTN
TRRAP
TMEM130
CLCN7
NOTCH2NLC
TBL2
NOTCH2NLB
NOTCH2NLA
GOLGA7B
LFNG
VPS52
RPS18
B3GALT4
NOTCH3
PRR3
GNL1
FAM184A
RALGDS
PTPRR
C19orf33
ARID2
NIBAN2
PIK3R3
ZNF17
CBLC
LGR6
TSPAN1
P3R3URF-PIK3R3
P3R3URF
RHOV
PCOLCE2
GTF2H4
VARS2
MEAK7
MYBL2
MRPL27
EME1
NDRG1
SPRR2F
SLC25A11
RNF167
PFN1
CDK12
MED1
ENO3
LURAP1L
MAN2C1
PSG1
COA8
BAG5
RNASEH2C
KAT5
PTPRF
EAPP
SPHK2
TIPARP
RPL18
FAM83E
TTC31
CCDC142
SH3GL3
SOD2
MIDN
WTAP
USP30
MCM7
AP4M1
RPL7L1
TBC1D23
OAZ3
MALL
CDC23
SERPINE1
CIDEA
RNF10
MTIF2
WDR97
MAF1
CYC1
TMA16
COQ5
TRAF7
KRT13
LNX1
GOSR2
TAGLN2
TDG
C12orf73
ADGRG7
ZFP42
SH2D4A
DYRK1A
OPN1MW3
OPN1MW2
OPN1MW
TBC1D2
VWA7
TMEM18
PSMG2
CEP76
MAP3K7CL
WDR72
LY6E
CCT8
BBS10
AURKAIP1
TRIP4
PCLAF
PPWD1
CENPK
KRT86
UQCRHL
METTL2A
TNFRSF10B
GFM2
TXNL4B
DHX38
GINS1
RABL2A
TACR2
JMJD7-PLA2G4B
JMJD7
PLA2G4B
NOL8
CENPP
SREK1IP1
CWC27
STAM2
SYT1
OR2W3
VCAN
SNRNP200
SEMA6A
SNAI2
PSMC6
ERO1A
ENTPD7
TRIM16L
LRFN4
GRAMD1A
FAM162A
CCDC58
TMED4
DDX56
PSMD12
ATP6V1G1
GNG4
METTL2B
XAB2
STXBP2
PCP2
GTF2IRD2
TRIM55
ZMAT2
HARS2
HARS1
TMEM123
PSMB2
RARA
THUMPD2
JRK
ERP27
POU5F1
CASP5
ZSCAN21
PSCA
RFC4
GPR39
SLC39A2
METTL17
DDX23
LARP1
MED20
BYSL
ANXA1
MRPS35
FBXL18
ZNF165
OR1F12
CELA3B
CRTC1
WDR86
SPDYE14
SPDYE10P
CASTOR2
SMAD5
RHEBL1
DENND2B
RNF223
FSCN1
SLC33A1
PLXNB2
AKIP1
HSPA9
KMT2D
BCAT2
ATP6V0C
AMDHD2
VPS11
BRIX1
APCDD1
SENP2
RPL37
CARD6
STOML2
SCARF2
PIGO
VARS1
DDB2
NME1
NFKBIA
CCAR2
C8orf58
TLE3
PIM1
CARD18
MB21D2
TOMM40
FBP1
RAG2
IFTAP
MACC1
SNRPE
MRPS11
MRPL46
COX16
COMMD2
CORO1C
CRKL
LRMDA
FCF1
AREL1
SLC12A4
CD36
TRIM65
MRPL38
PLPP2
CYB5R2
TACO1
CLDN4
GOLGA3
RP1L1
PRR15
MB
HERC3
OR9A4
NAPA
RAD52
LEKR1
LGALS7B
TRIM56
PRSS8
CALML5
CXCL5
PIK3C2B
TMEM120A
SNIP1
DNALI1
PSG5
TOMM70
LNP1
SKIDA1
MLLT10
EIF2S1
ATP6V1D
ALDOA
MAP2K3
ODF1
ETV4
SLC2A4RG
LIME1
SPOCK2
NTSR1
ANAPC5
ANP32A
CTDSP2
TJAP1
SCAF11
GLCCI1
SOX9
SSBP1
NUDCD3
PPP1R37
USP31
FMN1
MUL1
CLDN24
CLDN22
SERPINB2
TH
INS-IGF2
INS
RGS20
ATP6V1H
TFAP2C
HEMK1
C3orf18
SUSD1
LEO1
STEAP3
ZKSCAN2
UBE2Q1
CHRNB2
PDE4DIP
NUP107
GTF2H3
EIF2B1
IPO11
DIMT1
CYP3A7-CYP3A51P
CYP3A7
FOXK1
RPL23A
RAB34
PROCA1
NDUFAB1
KLHL32
TM9SF4
RPTN
CEP63