ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457145 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◣ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

ALDH18A1
PDXK
SLC39A10
WDTC1
DDX17
EPC2
HNRNPA2B1
CBX3
EIF4G2
GABARAP
PHF23
DVL2
ELP5
CTDNEP1
STRBP
SEPTIN7
SLC25A25
NAIF1
WASF2
NUDT3
KCNK4
GPR137
BAD
DAGLA
RSF1
AAMDC
GSK3B
MSMO1
RPS6KC1
ART1
RPGRIP1L
FTO
FAM72D
FAM72C
DUX4
LY6L
DDX42
CCDC47
USP49
FANCA
ARID3B
SMARCD2
SERPINI1
PDCD10
XPO7
DOK2
ATG16L2
SRSF1
UAP1L1
MAN1B1
FAM72A
PGLYRP4
FRG2C
ARL4D
RHOBTB2
MDM2
PMS1
ORMDL1
MTRNR2L1
PDZK1IP1
MOB1B
AURKAIP1
MAMDC2
DICER1
RHCE
PTPRF
SERPIND1
WWOX
HDAC6
INMT
MINDY4
ASIC3
LOC102724770
DGCR6
OPN1MW3
OPN1MW2
OPN1MW
MAP3K1
FAM72B
TEX28
ADGRL1
FCGR1A
HNRNPF
MEMO1
GPR182
BTNL9
NEXN
MARCHF2
CCDC200
KLHL22
BACH2
UBE2H
DENR
SLC6A9
AVEN
PRAME
ZNF33B
EPB41
INTS10
RFX1
CENPC
STAP1
RELN
INO80C
NXF3
SLC4A1
PPP6R1
SSH1
PCNT
C21orf58
SEPTIN5
GP1BB
TMEM275
KNCN
PYCR2
SULT2A1
ZNF30
PTPRH
TANGO2
ARVCF
WBP2
KANSL3
FER1L5
GYPB
C1orf116
NOS3
ABCB10
PHRF1
TSHZ2
XRCC5
CSTF2
E2F6
VIM
CAPRIN2
ABO
DRC7
NFE2
MACC1
RBM39
PPP1R15A
SLC45A3
CFAP36
SLC7A8
SEPTIN9
SNAP29
PI4KA
MAN2A2
NFU1
SPTAN1
ZNF77
RAB33A
ZFAT
TMEM87B
CASS4
ZNF497
A1BG
PRKAB1
TSPAN32
C11orf21
WNK1
AVPR2
ZNF451
DHRS3
VWA7
ZNF852
CDK12
MED1
KMT2E
RHD
P2RX6
TCP11L2
WDR74
STX5
PHF19
POLR2J3
DCLRE1B
AP4B1
SYT7
RCHY1
NUP214
PSMD5
BIRC2
H4C4
H3C4
H2BC6
ALAS2
TRUB2
COQ4
ARID1A
TJP3
ZNF347
CSPP1
COPS5
USP17L22
USP17L21
USP17L20
USP17L12
PXN
RTN4
DNMT3B
COMMD7
DNAJB2
CLUL1
YJU2
TMEM59
TCEANC2
MUC3A
UBE2L3
RIMBP3C
RIMBP3B
ZNF609
TRIM37
SYF2
CCDC22
LEPROT
LEPR
TRMT10A
MTTP
HDHD3
FRG2
FXYD3
CXXC5
AIFM1
ZNF117
ERV3-1-ZNF117
ERV3-1
TUBA1C
SIRT1
KIAA1586
FKBP8
RIPOR3
RNF168
SMCO1
RPS11
RPL13A
EZH1
RAMP2
SUPT7L
SLC4A1AP
RNF223
CMIP
ACSM1
BCL3
RNASEH2C
KAT5
WDR89
NCAPD2
MRPL51
CEP43
PRDX1
KRT10
BCL7B
HSF5
GP9
RNF217
SLC43A3
GAGE2B
NXT2
SLC2A1
NR4A3
HECTD3
ZBTB7B
LENEP
ERMN
CSF1
PAXBP1
TMEM248
CASC3
FUT10
ERCC6L2
BRD7
HAGH
FAHD1
LAMB1
PPIL2
TM7SF3
MED21
CYP3A43
NOP16
HIGD2A
ADAMTSL4
CRB1
ZMYND8
DIP2A
RBM8A
RBBP5
ANKFY1
ZNF165
OR1F12
VILL
UFD1
CDC45
SVBP
ERMAP
KDSR
TMEM72
TMEM94
FOXJ1
EML2
CRKL
NBPF10
TTC26
PRPF38A
ORC1
NLGN3
RASA4
CTBS
GUCA1B
NME1
ADARB1
CCR9
IL36A
TUBGCP5
LYL1
THAP7
SRCIN1
PRDM8
RHOC
SCN9A
RAB33B
CCDC88B
CENPF
COQ10B
ZNF335
C6orf89
SPATC1L
UBE2F
IL1R1
GNB2
GTF3C2
ZNF408
ARHGAP1
MARK3
LZTR1
COLGALT2
KCNN4
PDE4C
PLEKHA4
REXO4
ADAMTS13
SLFN14
BTBD10
OBSL1
NUF2
INHA
CR1L
NARF
CCDC116
SDF2L1
FBXW11
NECTIN4
STAT6
KCNH2
GNA12
KLHDC9
TNPO3
FKBPL
ATF6B
ARF3
FABP6
LAG3
PTMS
COL18A1
C10orf71
ARID2
RINL
TRIM63
MLX
HSD17B1
COASY
KRBA1
SUPV3L1
TPGS1
ZNF391
RPS26
YIF1B
KCNK6
USP21
PPOX
BNIP3L
CDC42EP1
ZSCAN31
TBL2
ATAD2
KDM3A
ITLN2
GBA
PCIF1
ST3GAL4
NPR1
ILF2
BTG2
GYPE
DMAP1
TBL1X
FLVCR1
KIF2C
MRPL40
HIRA
TOP3B
ASIC4
IL1RL1
PLSCR1
TRIM69
TENT5C
CLP1
YPEL4
ST6GAL1
SCN1B
HPN
ASXL1
FAM83A
WDR46
RGL2
PFDN6
TSC1
GFI1B
BTNL10
SPAAR
HRCT1
SAMD4A
SELPLG
AP1G1
SPTBN4
BLVRB
NQO2
GOLGA8B
OAZ1
C6orf47
BAG6
APOM
JSRP1
TOR4A
WASHC2C
NDUFS3
KBTBD4
FAM180B
OR10V1
IQUB
MBD2
MED15
PUS7L
IRAK4
RPL12
LRSAM1
NSD2
SIRT4
SLC26A8
MAPK14
OSBPL5
ZZZ3
PDE4DIP
TUBE1
FAM229B
STK11
UROS
BCCIP
BHLHA15
RRP15
ATP8B2
AQP10
NR1H3
ACP2
LIMS1
SLC35B2
HSP90AB1
EPS15
GPX1
AJUBA
USP4
SMG7
TAF12
OAZ2
C3orf86
STOML3
CA1
YDJC
TFPT
PRPF31
ITGB3BP
EFCAB7
CCNI
ZSCAN30
SF3A3
FHL3
SLC25A37
SH3BGRL3
MRPL48
PAFAH2
NUP210L
TSSK2
DGCR2
NDUFS7
RPEL1
FOXN1
ZNF273
STARD9
LAPTM4B
CCNG2
ATAD3A
RSAD2
THEMIS2
NBPF1
LUC7L2
GRIN1
ZCCHC24
EGFL7
RPS19
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ASCC1
ANAPC16
TRIM3
TIMM10B
CLTCL1
SLC10A5
IMPA1
TMCO6
NDUFA2
IK
EHD1
TCTEX1D4
PLK3
BTBD19
SLC35E2A
KLHL20
CDC5L
SZT2
MED8
CPOX
DRD4
AQP1
PTK2B
PTCD3
POLR1A
FRMD4A
C1orf226
RPA2
SLC25A42
MICOS10-NBL1
MICOS10
TRIM35
SPATA46
UTP3
DIPK1A
ZFPM2
RTBDN
MAST1
SLC6A19
ST7
KSR1
MFSD12
HTR4
GOLGA3
CALM2
TRIM6-TRIM34
TRIM6
S100A13
S100A1
CHTOP
ATP6V0A2
GAGE12J
GAGE12G
PPM1F
ZNF683
EMID1
ARFGEF2
GABPB2
UCP3
SIGLEC12
SSBP1
MGAT5
RAB32
WDR70
NUP155
ZNF669
TPP1
TAF10
H4C8
RRP8
ILK
C1orf159
ECM1
LRRC37A3
EAPP
CTSD
TMEM120A
NFKBIL1
DDX39B
ATP6V1G2
COPB2
RASA4B
CCNC
PSPN
ALKBH7
AP1M1
CIBAR2
KRR1
DNAJB12
ALG14
RBL1
RPS8
ZBTB45
SLC27A5
TRAPPC9
THAP9
SEC31A
PMVK
NUPR2
CHCHD2
SAT1
LARS2
CHSY1
GET4
PISD
CSDE1
PPM1D
TMEM43
CHCHD4
TBC1D25
SART1
SNAI3
NPL
PECAM1
CUL5
RGS19
OPRL1
LKAAEAR1
PRDM11
SCAMP3
FAM189B
S100Z
UBE3B
KCTD10
TNFRSF1A
SNRPE
MYL12A
RNF10
NBEAL2
CCDC12
IGF2BP3
RAP1GAP
SLC25A11
RNF167
PFN1
GP1BA
CACTIN
TMEM18
ATXN7L2
CYB561D1
GLIPR1L1
CAPS2
BSDC1
MRPS28
FBLN2
SS18
H4C5
H2BC7
H2AC7
KCNAB2
MYBPHL
OR10AC1
NBPF26
NBPF19
NBPF14
HERC1
NDE1
MARF1
METTL25
CCDC59
UBE2I
ST3GAL2
CCRL2
SPIDR
TXN2
BSG
LENG9
CDC42EP5
NCOA4
TRIP4
PCLAF
PIH1D2
NKAPD1
C8orf37
NUP42
TMEM107
BCAS2
TAS1R1
NOL9
ADAMTS14
CPT1A
H4C3
H1-6
HMX3
TMOD1
ATP6V1FNB
ATP6V1F
IQCB1
EAF2
MRPL45
PDCD6IP
ORAI2
LIPC
KDM5C
GAS2L1
C19orf81
ECE1
PRR19
PAFAH1B3
MSANTD1
CEP85L
ZC3HAV1
UBE2B
CDKL3
TMEM242
JMJD1C
OR2C1
SEC22C
MFAP3L
SS18L2
PUF60
NRL
DCAF11
FSTL3
PTEN
KLLN
ZNF474
TCTEX1D1
CLCN3
GAGE2A
ZNF444
PRODH2
GAGE12H
GAGE12E
GAGE12D
GAGE12C
MRPL27
EME1
KRT8
TOM1L2
DRC3
H2AX
HMBS
FCMR
PTGDR2
ZP1
CDKN1A
CORO1C
ZNF555
ANKRD61
CYB561
ACSF3
NPPA
RBM26
THEG
NTRK1
INSRR
ARMC8
TXNDC2
SCARF2
TNFRSF1B
MRPS7
MIF4GD
GGA3
NUDT1
MRM2
MAD1L1
QRICH1
PTMA
RAP1A
UBOX5
FASTKD5
KMT5A
HYLS1
TSGA10IP
ZDHHC6
VTI1A
PIK3R3
SMIM41
ATG101
RNFT1
PPIH
MDM4
NR1D1
HEMGN
PPP4R3A
GATA1
KLF10
RBPJ
SPRR2A
TRIB1
SPRED2
EPHA2
CSTF2T
PRRG2
H1-0
GCAT
TARS1
NOSIP
RNF144A
PITHD1
TREM1
RCCD1
FAM210B
ZNF556
KLF9
TMEM167B
CORO2A
DGCR8
TRAPPC4
RPS25
LMLN2
KCTD14
CEBPE
YTHDC1
TTI2
GNG14
DHPS
AP5Z1
SPNS1
LAT
TAOK1
PDE7A
ARAP3
RAB42
HDAC8
COX7A2L
ARL14EP
ARNT
CFAP298-TCP10L
CFAP298
DDIT4
TUBB
MDC1
STAG3
MAP11
GPC2
GAL3ST4
CRCP
POLR3F
DZANK1
DMAC2
ERICH4
PSME3
BECN1
SUPT5H
RPS16
RPUSD2
CCDC32
BMX
PSMC5
FTSJ3
IREB2
TTC21B
ALDH2
RABEP2
CD19
SHISA4
MRPL39
BPHL
CCDC97
GPATCH3
ZC3HC1
UBAC1
HAPLN2
CLK3
SDE2
GP6
DYNC2I2
HTR1F
CDCP1
RINT1
PUS7
BAK1
WNK4
VPS25
ZNF57
PPP1R13L
POLR1G
TMCO2
ZMPSTE24
RPS7
WDR55
DND1
RPP25
SFSWAP
ATG9B
ABCB8
GTF2H4
VARS2
CACYBP
SRCAP
LOC730183
SKIV2L
NELFE
MAP3K8
CD33
RALGDS
RHEBL1
GOLGA7B
KMT2D
RHAG
TUBB1
TMEM244
PACSIN2
RPL5
PXT1
KCTD20
WDR83OS
WDR83
MAN2B1
THG1L
TIPIN
PDCD2L
COL1A1
IFNAR1
FZD1
TPR
ODR4
JOSD2
ASPDH
RAB11FIP1
ZNF74
PARP16
GYPA
NCDN
KIAA0319L
SLC27A4
PXMP4
TMEM52
CALML6
FZR1
SCRN2
OSBPL7
LRRC46
SUSD1
PFDN4
HNRNPH1
PRR5
H3C13
H2BC18
ELF3
POLR2J2
TNFAIP8
PPP4R3B
AHCTF1
DPEP3
DPEP2
SH3BGR
LCA5L
AIP
ATP8A1
TMEM134
RHBDD1
WASHC2A
TET3
TMEM69
GPBP1L1
SYCP2L
GCM2
C12orf76
RPL10A
GOLM2
THRAP3
STAT3
ZMIZ1
HDAC11
MST1
ERVH48-1
HNRNPH2
GLA
SMG5
LMOD1
FDXACB1
C11orf1
ALG9
TMEM79
TSPAN1
P3R3URF-PIK3R3
P3R3URF
TIMM17A
SRSF7
NRCAM
USP54
LDB1
NEK2
LY6G5C
MRPL35
IMMT
GRAP2
OR52A1
NBPF9
STRIP1
CBFA2T3