ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277329 | MEL
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◢ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◣ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Cldn34d
Greb1
Rptor
Zfp513
Snx17
Eif2b4
Hexb
Tbcd
Txndc11
Scrib
Eif2b5
B9d1
Setdb1
Tmed2
Rilpl1
Chmp6
Sepsecs
Ndufaf5
Esf1
Olfr806
Epg5
Kpna1
Aaas
Abhd6
Dok3
Ddx41
Nkx2-6
Il31ra
Atf6
Gpn3
Fam216a
Mtmr10
E030030I06Rik
Cox6c
Ttyh2
Rpl38
Pold3
Get1
Mrpl44
Sass6
Zfp949
Mapkbp1
Cenps
Armc1
Ndufa9
Akap3
Pus1
Ep400
Fitm2
Dync1i2
Mvk
Mmab
Pcdh20
Opa1
Zdhhc1
Ndufb8
Hif1an
Sec31b
Ufl1
Terf2
Rnf7
Stk32c
Lrrc27
Vps72
Pip5k1a
Lamtor5
Med17
Ndufs4
Timm50
Sdad1
Cul2
Zfp846
Borcs7
Setd4
Cbr1
Tsfm
Zpr1
Bud13
Crebl2
Uqcc3
Ubxn1
Lypla2
Gale
Dus2
Ddx28
Prrt2
Maz
Klhl18
Kif9
Dnajc16
Casp9
Kpna6
Wwox
Ift22
Cog7
Crlf3
Atad5
Syngr1
Rpl3
Tnfaip8l2
Tmod4
Scnm1
Lysmd1
Akirin2
Zdhhc7
Zfp933
Snrpc
Yipf2
Timm29
Xpc
Lsm3
Aldh9a1
Tmem205
Ccdc159
Rab3d
Plppr2
Pop7
Med6
Ppp1r7
Pask
Cdca4
Cox8c
Aldoa
Tlcd3b
Retsat
Elmod3
Bbs5
Aadacl2fm1
Calcoco1
Rab5if
Mink1
Rtcb
Pdcd7
Nuf2
Sugp2
Armc6
Pole3
Alad
4933430I17Rik
Fbxw4
Mrpl19
Mis18bp1
Rhot1
Dhx16
Pigu
Wdr12
Carf
Rnf113a1
Ndufa1
Clptm1
Apoc2
Zfp668
Zfp646
Atrn
Cluh
Psmd9
Olfr1274
Marchf3
Sstr1
Mccc1
Clcn7
Erc1
Zc3h18
Slc18b1
Rps12
Cdkn2d
Gzmk
Get4
Ppp6c
Sspn
Raver1
Tbcb
Polr2i
Ovol3
Med23
Mgst3
Fyco1
Xcr1
H4c14
H3c13
H2bc18
Mtif3
H2bc21
H2ac21
H2ac20
Gss
H4f16
H2aj
Nme1
Rbl2
Bod1l
Osbpl1a
Med18
LTO1
Olfm1
Dmap1
Dis3l2
Rbm8a
Pex11b
Itga10
Rnf123
Mst1
Eif3c
Pcmt1
Gatad2b
Nup43
Mtrex
Dhx29
Frg1
Trmt1
Nacc1
Pum3
Ndufb5
Mrpl47
Csf2ra
Tars
Kif2c
Smarcal1
Col6a6
Drg2
Dcp1a
H2bc6
H4c4
H3c4
H2bc7
H2ac7
H1f3
H3c6
H2bc8
H2ac8
Gtf2b
Aebp2
Als2
Cep63
Anapc13
Treml4
Gpatch1
Nxpe5
Rnf10
Coq5
Slc25a32
Dcaf13
Atad3a
Vta1
Tyw3
Cryz
Fntb
Heatr1
Mettl25
Ccdc59
Tgfbr3l
Map2k7
Rab27a
Pigbos1
Pigb
Jund
Iqcn
Riok1
Cage1
Blmh
Ranbp6
9930021J03Rik
Hdhd3
Zfp560
Smg8
Snapc2
Ctxn1
Slc14a2
Stk35
Gspt1
Pds5b
N4bp2l2
Usp39
0610030E20Rik
Ccdc57
Rp9
Bbs9
Clcn4
Mff
Ddx42
Ccdc47
Tmem18
Gm10710
Dchs2
Gmfb
Cgrrf1
Wdr5
Pkig
Rrp1
H3c15
H3c14
H2ac19
H2ac18
Pacsin3
Arfgap2
Tmem250-ps
Cep295
Ier3ip1
Wdr43
Poc5
Smarca4
Ube2j2
Kntc1
Rabl6
Ccdc183
Ikzf5
Acadsb
Acsf3
Tecpr1
Tmem129
Tacc3
Slbp
Pdcd2l
Vmn2r102
Sde2
Plekhn1
Klhl17
Kctd3
Pbk
Ap1g1
Cd59b
Trp53rkb
Irf2bpl
Dnttip2
Ttc39d
Lsm6
Stx8
Cfap52
Mcl1
Tmem168
Rab33b
Nup54
Ndufs3
Kbtbd4
Psd
Fbxl15
Tarbp2
Npff
Map3k12
Gid8
Dido1
Nudt5
Cdc123
Ints2
Hdgf
Taf1b
Samt2b
Hps5
Gtf2h1
Fdxacb1
1110032A03Rik
Fbxw7
Taf11
Anks1
Nup153
Cdh12
Sympk
Zglp1
Foxa3
Mrpl21
Ighmbp2
Ipo9
Chordc1
Mrps35
Zfp809
H4c3
H1f6
Slc38a2
BC028528
Nyx
Aph1a
Lig4
Abhd13
Mtmr2
Psmg3
Gcnt2
Nfat5
Diaph1
Tspan4
Polr2l
Cd151
Dgat1
Pde6d
Cops7b
Stxbp4
Cox11
Tmem267
Thg1l
4930415O20Rik
Ccnt1
Birc5
Maneal
Gm3448
Gm3417
Tcte3
Ermard
Snx5
Mgme1
Pramel32
Ifna13
Palb2
Dctn5
Ermp1
Tmem248
Tspyl2
Mrpl30
Mitd1
Rap1a
Uevld
Nelfa
Zfp511
Tubgcp2
Coa6
H4c11
Cdkal1
Prcc
Ap1s1
Commd1
Cct4
Bnip1
Smn1
Usp30
Svop
Arl5a
Clpx
Hmbs
H2ax
Dpagt1
Phf23
Gabarap
Dvl2
Mrpl4
9030025P20Rik
Mettl9
Xrra1
Spcs2
2410002F23Rik
Calm2
Ppip5k2
Gin1
Mrpl35
Immt
G3bp2
Ciart
Polr3g
Mblac2
Mrps30
Golga4
Rrp15
Fcgr4
Tbl3
Ilf2
Npr1
Tbc1d7
Nbas
Tatdn3
Nsl1
Pyroxd1
Swsap1
Epor
Clec2g
Uspl1
Atp5g1
Klhdc4
Atr
1700065D16Rik
Gm525
Wdr36
Nemf
Siah1a
Trrap
Tmem130
Napepld
Cdk7
Birc2
Tti2
Slc39a4
Cpsf1
Dpy19l4
Srr
Smg6
Hars2
Hars
Copb1
Lonp1
Catsperd
Eapp
2610001J05Rik
Trim50
Fkbp6
Tmem211
Bmpr1b
Ciao2b
Zfp207
5730455P16Rik
Pik3r3
Spns1
Lat
Fam149b
Ecd
Rprd2
Gsk3a
Atg4c
H3c3
H2bc3
H1f2
H3c2
H2ac4
Luc7l
Fam234a
Mrpl2
Klc4
Cul7
Mapkapk5
Mfap2
Cdc16
Ddx19a
Atp1b2
Gm3435
Gabpb2
Cfap45
Rusf1
Lgals8
Arhgap11a
H4c2
H4c1
H3c1
H1f1
Morf4l1
Tcp1
Pnldc1
Mrpl18
Arf6
Pts
Cct8
Mrpl1
Tchp
Commd2
Ap4e1
Nup133
Tinf2
Nedd8
Gmpr2
Atp9b
Fam189b
Rita1
Ddx54
9530077C05Rik
Anln
Hsph1
Eefsec
Rnf180
Exoc7
Tgfb1
B9d2
Tmem91
P4ha3
Actb
Ppp1r11
Znrd1as
Znrd1
Rnf39
Slc39a1
Crtc2
Rfk
Creb3l4
Insig1
Mrpl20
Ccnl2
Secisbp2l
Abraxas2
Taco1
Nsa2
Gfm2
Ube4a
Ddx3x
Tm7sf2
Cox5a
Zfpl1
Vps51
Tmem262
Cdca5
Marchf6
Rs1
E130309D02Rik
Micall2
H3c8
H4c6
H3c7
H2bc9
Sec22b
Nvl
Cnih4
Clcn3
Mrps31
Tecpr2
Cinp
Clasp1
H4c9
H2bc12
H2bc11
H2ac12
H2ac11
Tob1
Arel1
Slc25a51
Atg16l1
Hbs1l
Prom2
Pex19
Oasl1
Anapc5
Tmub1
Fastk
Agap3
Olfr1416
Ndufa10
Gtf2f2
Lrriq3
Fpgt
Trim29
Stx16
Rundc1
Ptges3l
Aarsd1
Srp19
Chmp4b
Snrpd3
Gucd1
Zfp426
Kctd5
Mtg1
Slc39a13
Rlf
Aggf1
Arnt
Zfp26
Cdc37
Zfp143
Rbks
Babam2
Trmt5
Slc38a6
Ppp6r3
Rrh
Gar1
Cfi
Cerk
Prdx1
Sfxn5
Ints6
Arpc2
Tmed9
B4galt7
Prr14l
Depdc5
Erlin2
Esyt2
Htra2
Dqx1
Aup1
Fmc1
Mtpap
Ppbp
Ap3s2
Pf4
Pknox1
Chmp7
Ankzf1
Nudt14
Cd209a
Tmem167b
Sfi1
Eif4enif1
Rpp30
Gsdma2
Ubc
Zfp36l1
Gcgr
Fcgr1
Wdr61
Ptar1
Rad9b
Pan2
Il23a
Hpx
Man1a2
Ubox5
Fastkd5
Tars2
Taf13
Mkrn2os
Mkrn2
Lrpprc
Ammecr1
Rab11a
Ndufs1
Eef1b2
Map3k4
Tmem125
Tex14
Fosb
Stx18
Tmed4
Ddx56
Rtn2
Mllt11
Cdc42se1
Slc43a1
Hspa5
Zar1l
Brca2
Copz1
Tmem39a
Gtf3c3
Spg11
Sumo2
Cyp2w1
Cox19
Pdss1
Ovol2
Mycn
Hnrnpa2b1
Cbx3
Thap11
Nutf2
Cenpt
Dus1l
Serpini1
Pdcd10
Zbtb4
Kat2b
Cnot1
Eif4g2
Gmeb2
Ndufc2
Msra
Ldlr
Pcif1
Oxsm
Ngly1
Mrps21
Selenbp1
Unk
H3f3b
Polg2
Ddx5
Cep95
1700001P01Rik
Rpl23
Lancl2
Selenbp2
Taf5
Gtf2h3
Eif2b1
Slc26a8
Mapk14
Rnf166
H1f4
Caprin1
Cdk11b
Ezh1
Mfap5
Atp1a1
Khdc4
Mcph1
Cfap43
Atp2a1
Ppm1b
Asic1
Zfp212
Pdzd8
1810010H24Rik
Plek
Slc35g3
Polr2a
Tent5c
Ythdf1
Birc7
Sacm1l
Anp32e
Mppe1
Slc25a11
Rnf167
Ppil4
Zfp692
Pml
Slc7a15
Asb1
Gp1ba
Hgsnat
Trmo
Psmb2
Elp5
Ctdnep1
Mis12
Derl2
Wdr77
Atp5pb
Nat10
Eif2s1
Atp6v1d
Dnajb4
Fubp1
Taf4
Rps23
Plin2
Psmd3
Cwc27
Nop16
Higd2a
Taf9
Rad17
Ak6
Klhl7
Vegfa
Phf20l1
Bms1
Pan3
Kcne2
Smim11
Gle1
Mrto4
Emc1
Ell3
Snrpa1
Tbck
Aimp1
Sec13
Tox2
Lins1
Gtf3c6
Sirt4
Tmem50a
Syf2
Rsrp1
Matr3
Ttll11
Vps33b
Mrpl22
Gemin5
Nxt2
Tmem87b
Pmf1
Pald1
LOC547349
H2-L
H2-D1
Zfp407
Erlec1
Asb3
Tmem39b
H2bc4
H2ac6
Plvap
Tuft1
Rfx3
Smndc1
Trub1
Pi4k2a
Morn4
Abca3
Abca17
Zfp791
Paxip1
Krr1
Dhx33
Fra10ac1
Klf4
Cnpy3
Tcerg1
Vars2
Gtf2h4
Cbwd1
Zfp317
Ctnna3
Sephs2
Mrpl3
Kansl2
Slc7a6os
Prmt7
1110051M20Rik
AI467606
Txnip
Ndufs7
Ppig
Stk11
Fastkd1
Sbno2
Tmco6
Ndufa2
Ik
Tut1
Rsbn1
Brf1
Slc3a2
Polr2m
Utp15
Ankra2
Prpf3
Coa7
Nubp1
Caprin2
Pogz
Ift172
Gckr
Fndc4
Tfb2m
Cnst
Mcfd2
Leng8
Trp53rka
Med31
4930563E22Rik
Txndc17
4933427D14Rik
Tacr2
Oaf
Havcr2
Sec61a1
Snrnp27
Rps24
Polr3a
Gatad2a
Ptges3
Wnk4
Vps25
Ric1
Ramp2
Arhgdib
Erp27
Trip4
Pclaf
Nipsnap2
Mrps17
Nfx1
Inpp5k
Slc44a2
Ap1m2
Rab5c
Fahd2a
Zfp113
Cops6
Tmem104
Nat9
Eipr1
Mre11a
Ankrd49
Espn
Psmc1
Trappc12
Gdf1
Aqp9
Hsp90aa1
Tkfc
Ddb1
Faf1
Cdkn2c
Fam83a
Ubxn4
Rpp25l
Safb2
Safb
Dctn3
Pus7l
Irak4
Atg5
Ppp1r10
Mrps18b
Atat1
Vmn2r4
9430015G10Rik
Mterf1b
Ddx59
Tm2d1
Dcaf10
Anapc10
Abce1
Napg
Psmg1
Wdr59
Bzw2
Ankmy2
Crlf2
Zc3h10
Rpl41
BC107364
Tfeb
Ttc32
Acp6
Dhdds
Fam185a
Ccdc146
H2ac10
Prnp
Prn
Rpl12
Lrsam1
Rnf6
Cdk8