ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX735310 | Th2 Cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◢ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◣ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Greb1
Nkx2-6
Olfr855
Olfr854
Txndc11
Kpna1
Pknox1
Zfp949
Hexb
Il31ra
E030030I06Rik
Olfr806
Suz12
Fbxw4
Abhd6
Cldn34d
Acacb
Rps29
Lrr1
Cd209a
Aldh9a1
Nemf
Shc1
Flad1
Cks1b
Lenep
Cox8c
Osbpl1a
Olfr1274
Sfi1
Eif4enif1
Fyco1
Xcr1
Pramel32
Ifna13
Rfng
Gps1
Gm10710
Dchs2
Sspn
Dnah7b
E2f2
Tnp2
Socs1
Prm3
Prm2
Il2ra
Csf2ra
Setd4
Cbr1
Thumpd3
Wwox
Nabp1
LOC547349
Gm3448
Gm3417
9030025P20Rik
Abca3
Abca17
Fkbp1a
Stat1
Ms4a6d
Rsph3a
Mcl1
Scrib
Malt1
Tgfbr1
Wasf3
Cdkn2aipnl
Rsph3b
Rasip1
Izumo1
Fut1
Fgf21
Cdk5rap3
Zfp945
Tex14
Epop
Prkdc
Mcm4
Prkce
9430015G10Rik
H4f16
H2aj
Ankdd1a
Prl3c1
Tmem267
Copz1
Pif1
Plekho2
Fam227b
Dtwd1
Zcwpw2
Azi2
Acads
Unc119b
1600014C10Rik
Olfr524
St3gal2
Cdk17
Xirp1
Tmem125
Ccin
Sema4a
Ddx23
Dpy19l4
Fam3c
Col6a6
Fmnl3
Kif2c
Rpia
Mrpl44
Rbm17
Pafah2
Gm13286
Gm13283
Gm13271
Mterf1b
Spns1
Lat
Fam220a
Acod1
Asb2
Snrpd3
Gucd1
Ppard
Aff4
Bcl3
Scgb1a1
Gm3435
Tspoap1
Tsen2
Mterf1a
Basp1
Pex14
4930550C14Rik
Ccr4
Lyl1
Gpr162
Ddah2
Clic1
Msh5
Gtf3c6
Qrich2
Il10
Tmem115
Snx18
Nprl2
Cyb561d2
Rassf1
Ahcyl1
Zmynd10
Rad54l2
Wbp2
Unc13d
Il20
Btg1
Ythdf2
Hemk1
6430571L13Rik
2610001J05Rik
Tcte3
Ermard
Ifrd1
Foxo1
Lif
Ethe1
Prss56
Celsr1
Ermn
Ptges2
Ankar
Ago2
Il1f10
Cltc
Pik3cd
Ncmap
Usp48
Jund
Iqcn
Vps18
Ppdpf
Lrwd1
Alkbh4
Calcoco1
Taf1c
Adad2
Clcn4
Ptp4a2
Fbxo15
Timm21
Dnajc11
Mief1
Nek2
Cpsf4l
Chst2
Prkcq
Ap1g1
Sec24a
Sar1b
Gatb
Wasf1
Cdc40
Gna15
4932438H23Rik
Arhgef2
Irgm1
Ctdp1
Ppp1r3b
Pds5b
N4bp2l2
Gnai2
Mgat5b
Aen
Rnaseh1
Bcr
Dhx8
Tha1
Atp5o
Gpr61
Gnai3
Slc27a4
Shmt2
Ndufa4l2
4930415O20Rik
Mpig6b
Ly6g6c
Siglec1
Med27
Ankrd44
Pacsin1
Il24
Car5a
Banp
Trp53rkb
Islr2
Ffar3
Ffar1
C5ar1
Septin9
Arl4d
Ncor1
Pigl
Rbm4b
Taf6
Mblac1
Cnpy4
Cdc42bpg
Itk
Ptk2b
H4c11
Epc1
Haspin
Exoc2
Cebpb
Sdhb
Irak2
Rad9b
St3gal4
Il7r
Dip2b
Cfap45
Ddx20
Rdh11
F2rl2
Nme1
Trpv4
Rtp3
Med23
Nbeal2
Tsnaxip1
Ranbp10
Csf2
H4c9
H2bc12
H2bc11
H2ac12
H2ac11
Sik2
Rubcn
Fyttd1
Nemp2
Crebl2
Lsmem2
Ccpg1os
Ccpg1
Sema3b
Bcl2l14
Sharpin
Maf1
Cyc1
Gm35339
Rer1
Morn1
Taf12
Gmeb1
Dusp2
Astl
Zfp637
Sgo1
Nyx
LOC666331
Gm11634
Palb2
Dctn5
Vti1b
Chmp4b
Krr1
Psmb10
Ctrl
Ifnab
Ramp3
Clec2d
Pprc1
Tmem39a
Rfx7
Adnp
Sp2
Zscan10
Tmsb4x
Sec22c
Gipr
Snrpd2
Qpctl
H3c3
H2bc3
H1f2
Rps21
Zfp91
Lpxn
Vps45
Snrpa1
Gnb1
H2-Q8
H2-Q6
H1f3
H3c6
Eapp
H4c6
Phf12
Clpb
Rab29
Rdm1
Exosc6
Tnfaip3
Lrrc32
Rai1
Calm1
Mex3a
Olfr525
Prcc
Tmem168
Ubqln4
Rab25
Lamtor2
Faap20
Rplp0
Gcn1
Ppan
Angptl6
Shfl
Batf
Srp9
Kcnn4
Lilrb4a
Trmt10c
Pcnp
Scd2
Fhit
Gm13285
Gm13290
Gm13289
Ifnz
Gm13272
Fbxo46
Bhmg1
Fmnl1
Lgi4
Fxyd7
Fxyd1
Ccdc9
Rpp30
Bola3
Treml2
Cerk
Ndufs3
Kbtbd4
Pdxp
Ly9
Midn
Atp5d
Cbarp
Tmem11
Gramd4
Tinf2
Nedd8
Gmpr2
Zscan22
Gimap1
H2bc6
H4c4
H3c4
H2bc7
H2ac7
Smarcal1
Lst1
Aif1
Slc36a1
Ppp1r9b
Prss8
Samd14
Furin
Trim7
Trmt2a
Ranbp1
Nsmce1
Slc33a1
Tac4
H4c3
H1f6
Zbtb4
Slc35g3
Polr2a
Unk
H3f3b
H3c15
H3c14
H2ac19
H2ac18
Aadacl2fm1
H4bc24
H2bc23
H2ac24
H2ac23
H4c14
H3c13
H2bc18
H4c18
Cxcl1
Rps19bp1
Atf4
Eif1
Cwc22
Errfi1
Actb
Mt1
Mt2
Polg2
Ddx5
Cep95
Ubc
Gm525
H2bc8
H2ac8
Mat2a
Fth1
Actg1
Klf7
Eef1a1
H3c11
H2bc22
H2ac22
H1f5
Hnrnpa2b1
Cbx3
Prdx2
Junb
H3c8
Ube2a
Eif4a2
H1f4
Ttc39d
Ppp1r10
Mrps18b
Atat1
Ier3
Flot1
Tob1
Hspa8
H4c17
Arf6
Hspa5
Syngr1
Rpl3
Zfand5
Nfkbia
Tsc22d1
Dusp1
H2ac10
Egr1
H4c8
Ubb
Ppia
Slc35e3
Poldip3
Zfp143
Ctnnb1
Mdm2
Vim
Ftl1
Bax
Ier2
Pgk1
Id3
H3c2
H2bc21
H2ac21
H2ac20
H2ac4
Fam53c
Cdc25c
H4c2
Raly
H4c1
H3c1
Ddit4
Sp1
Nr4a1
Cited2
Tecpr1
Srsf2
Mfsd11
Adamts1
Zyx
H3c10
H2bc13
H2ac13
Chac1
Fbxl18
Thbs1
Dusp5
Vcl
Mettl23
Jmjd6
H2bc14
Zfp36l1
Fus
Cdkn1a
Slc38a2
Sdc4
Cirbp
Cebpd
Sirt4
Sqstm1
Cdh12
Herpud1
Nfkbiz
Fam174c
Btg2
Slc14a2
Fos
Pnrc1
Zfp36l2
Id1
Tpt1
Lmna
BC005537
Txnip
Ppp1r12a
Vmn2r4
Lima1
Sympk
Ccnl1
Prdx1
Ccn1
H1f1
Znfx1
Pcif1
Ulk2
Tmem107
Tuba1c
Pald1
Yeats4
Dnajb4
Srsf5
H2-DMa
Tmem167b
Odc1
Ptp4a1
Efcab2
Plk2
Hsp90aa1
Tuba1a
Sgk1
Sik1
Eef2
Dapk3
Rbm39
Nfat5
Tpm1
Hmbs
H2ax
Dpagt1
Srsf6
Rgs2
Brd2
Oasl1
Dnaja1
Srsf3
Palld
Slc35b2
Litaf
H2bc4
H2ac6
Pcbp1
Rps20
Dnajb1
Ddx3x
Serpine1
Slc25a4
Uspl1
Fubp1
Myl12a
H3c7
H2bc9
Hsp90ab1
Tuba1b
Slc3a2
Vmn2r102
Hnrnpu
Ywhaz
Fn1
Ptgs2
Tiparp
Ints6
Ccl7
Serinc3
Tti2
Zfp36
B2m
Cdc42
Nup62
Il4i1b
Atf5
Rhob
Hnrnph1
Tmem123
Timp2
Atp5g1
Usp4
Gpx1
Klf6
Zfp869
Rptor
Zfp513
Snx17
Eif2b4
Tra2a
Phlda1
Hnrnpab
Rcc1
Ccl2
Eif5
1810013L24Rik
Tmem18
Calm2
Hexim2
Itga5
Gtf2b
Plekhg2
Kmt2e
Taf4
Zfp207
5730455P16Rik
H2-L
H2-D1
Col1a1
Setd5
Zfp791
Eif4a1
Cd68
Itgb1
Cnot1
Dync1i2
Insig1
Med1
Cdk12
H4c12
H2bc15
H2ac15
Rap1b
Selenop
Dstn
Stat3
Pabpc1
Larp4
Ncl
Amn1
Kntc1
Ier5
Flna
Emd
Phlda3
Zfp963
Ppbp
Myh9
Pole4
Pdlim5
Zc3h6
Napepld
Sde2
Hmox1
Tmem50a
Syf2
Rsrp1
Hmgb2
Smim10l1
Csf1
Tmed2
Rilpl1
Zfp1
Lag3
Gapdh
Aaas
Jun
Scaf1
Rras
Nfe2l2
Ppp1r15a
Plekha4
Hif1a
Mbd6
Ddit3
Rnf10
Coq5
Resf1
Crem
Urgcp
Pus1
Ep400
Ndufs7
Retsat
Elmod3
Rad23a
Trib3
Mknk2
Gcat
Coq10b
Zfp655
G3bp1
Atox1
Tmem129
Tacc3
Slbp
Ptms
Sptan1
Wsb1
Slc18b1
Irf1
Pkd1
Pim3
Esyt2
Zfp868
Cxcl5
Atp6v0c
Amdhd2
Tmsb10
Senp3
Hgsnat
Nfkbil1
Ddx39b
Atp6v1g2
F3
Gem
Mrpl20
Ccnl2
Slc25a3
Wnk1
H1f0
Calr
Actr3
Rps12
Tob2
Kmt5b
Cfl1
Gls
Ppp1r2
Eif3a
Wdr81
Eif3c
Zbtb37
Socs3
Pdss2
Gm13287
Gm13279
Gm13278
Gm13275
Tra2b
Klf2
Uqcc3
Pdlim7
Rpl10a
Taf13
Matr3
Teddm1a
Glul
Slc9a1
Fstl1
Tctex1d4
Btbd19
Opa1
Nufip2
Rheb
Nip7
Cog8
Son
Gm36712
Gart
Gm13288
Dgat1
Ctsl
Ppig
Gm14595
Gm14590
Arrdc2
Rabgef1
Spen
Piezo1
Rnf19b
Fam166a
Atp2a2
Snx5
Mgme1
Eif4g2
Fosb
Egr2
Rnft1
Mettl25
Ccdc59
Ldha
Stpg3
Map2k2
Creb3l3
Ywhag
Csrnp2
Srsf1
Raf1
Bach1
Ptpn2
Zbed5
Chchd2
Map1lc3b
Sec61a1
Hnrnpa1
Cbx5
Birc2
Csnk1a1
H2-K1
Ptpn6
Grcc10
Hnrnph3
Morf4l1
Sp3
Ndel1
Mthfd2
Mob1a
Ptma
Lbh
Cds2
Baiap2
Cpeb2
Chrac1
Chmp6
Gadd45g
Slc39a4
Cpsf1
Gtf2a1
Kdm6b
Zfp866
Mtf2
Slc2a1
Wdr70
Sod1
Homer1
Arl5c
Rock2
Kctd5
S100a10
Pdf
Arntl
Nsd3
Letm2
Tmem230
Phf23
Pcna
Gabarap
Dvl2
Zc3h10
Rpl41
Mrpl45
Idh3b
Ugdh
Gsto1
Gadd45a
Txnl1
Mbnl1
9530077C05Rik
Dynll1
Nup155
Ets2
Tlcd2
Sub1
Vdr
Pias4
Arl14ep
Cd80
Adprh
Arih1
Ahnak
Slc39a10
Hipk3
Slc39a1
Crtc2
Gpx4
Ubxn1
Rabggtb
Hmgn2
Pbld2
Ifi211
Nfyc
Fgfbp3
Btaf1
Top1
Fitm2
Selenot
Sf3b1
Txn1
Wbp4
Elf1
Eif2b5
Acta2
Sepsecs
Sppl2a
Vegfa
Fasn
Galk2
Cops2
Sned1
Ccdc88a
Adnp2
Hdlbp
Col4a2
Eif4e2
Chrng
Slc5a3
Mrps6
Gabpb2
Tmem175
Plxdc1
Gak
Rab5if
Lrrc8a
Nsrp1
Gadd45b
Rpl9
Lias
Hnrnpa3
Prrc2a
Parva
Phb
Msh4
Zbtb11
Rpl24
Gpr84
Aacs
Rab11b
Gstp2
Gstp1
Tent5c
Gm13277
Sf1
Ddx59
Npm1
Mmadhc
Egr3
P4hb
Arhgdia
Kdm5a
Ccdc77
Ep300
Ubald1
Rmi1
Rab1a
Mgrn1
Hnrnpk
Tmpo
Gm13276
Rps8
Ppm1a
Rrn3
Rps3a1
Tubb4b
Slc34a3
Tut7
Ero1a
Lox
Rfx3
Pkm
Kansl2
Atp6v1h