ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX191913 | S2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◣ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Rbfox1
su(f)
CG17169
CG17168
CG17163
CG17162
CG17159
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
dnc
CadN
CG12689
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG14417
CG14416
Cyp308a1
CG44437
sno
REG
Hk
CG11369
CG34435
CG34434
CG5906
Sprn
CCDC151
Eh
CG14331
CG14330
CG15309
ATPsyndelta
beat-IIIc
Imp
sbr
CG15210
CG15209
CG8945
CG4955
wcy
CG4949
CG43077
CG31008
CG31007
CG9518
CG45065
CG45064
mud
mRNA-cap
Fbxl4
CG32599
CG1434
CG42700
Cam
cm
CG4593
CG42308
CG32736
CG3032
Inx2
Wdr62
side-VI
CHES-1-like
CG15478
CG13465
BobA
Pde1c
Tsp68C
Hml
CG8757
CG8750
CG43184
Neu2
CG7519
CG7202
croc
Vsx2
CG18063
CG12448
SteXh:CG42398
Rab9E
CG2111
CG15373
CARPB
CG1354
wts
dj-1beta
cindr
Dh31-R
CG4734
CG17047
Sh
ko
CG33285
CG33927
Calx
CG43446
Socs16D
CG12986
sick
CG13962
kirre
N
CG31064
CG42814
CG31068
CG42813
CG4991
CG16700
CG42346
bbg
Mpcp2
CG43246
sr
Fili
PpN58A
CG5897
CG15034
CG1999
Ubr1
goe
Twdlalpha
TwdlZ
CG32568
Ref2
Cpr97Eb
eater
CG17189
CG14259
CG14258
CAH9
CG12521
CG8119
CG8117
Gr59d
CG14186
CG14185
sNPF-R
CG3588
Ptpmeg2
CG3106
Asator
scrib
Lmpt
CG32170
Syn2
mbl
CG43237
Or82a
CG1092
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
Tlk
Rala
CG12007
cpo
Rim
CG43445
Ugt301D1
CG10211
salr
CG10384
shot
DJ-1alpha
rpr
CG12992
CG12991
Ankle2
CG9777
mthl1
SNRPG
RpS19a
Rok
RpL37a
trio
CG9205
CG14270
CG12206
CG10804
CG10803
CG10802
Tpst
CG46311
CG32633
CG32631
CG11816
HIP-R
meso18E
CG12531
Usp47
DnaJ-1
Or67d
can
Mur2B
hfw
CG3740
dor
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
CG13699
CG1724
CG14579
CG15059
TfAP-2
CG31275
CG12769
DCX-EMAP
spel1
mTTF
l(2)34Fd
l(2)34Fc
Send2
Rab14
Pgant35A
CG43052
CG7031
CG13840
siz
CG13872
Sarm
CG42591
CG42590
CG6066
CG5882
CG5880
gb
CG5815
CG6059
CSN3
CG3288
CG13255
CG11456
Ir92a
CG15429
Atet
CG5890
CG5886
CG14545
Proc-R
CG7024
Pdha
per
dyw
HLH3B
CG2652
Ptpmeg
mthl10
mth
Ugt37C1
CG34007
wit
Faa
CG32259
Dscam1
betaTub60D
CG3919
stwl
Eip63F-1
Naam
CG10481
mtd
CG31538
prage
Adar
mtgo
CG4631
CG31815
Scp2
CG14903
CG14891
tna
Snp
CG44249
CG13501
CG13500
ome
CG4914
CG43121
CG3638
CG11403
Mur11Da
CG32642
hec
viaf
Pop2
Grip163
CG6928
Cyp6a18
Gr98a
Liprin-gamma
Fie
pHCl-1
Rlip
CG5697
CG17278
CG12075
TwdlC
RYa-R
CG31076
CG31075
CG14253
CG31077
Moe
Ts
gammaTub23C
Rrp1
CG9641
CG3165
Rbp9
cmpy
CG34260
abd-A
CG33970
CG12730
Tak1
CG42579
RapGAP1
NtR
GM130
CG34205
a
gom
CG11269
mdlc
CG4390
Glut3
Nepl16
CG34027
CG45095
TTLL5
CG31510
raskol
Gycbeta100B
CG15556
CG15554
Sema2a
loopin-1
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
galla-2
OXA1L
CG6418
CG6409
Blos4
Galphao
CG12895
PCB
Ntmt
CG46338
CG30010
Lime
CG12744
zda
CheA56a
CG30122
east
PIG-K
nej
btd
Abd-B
CG6834
CG6908
Fer3
CG18765
CG14717
CG6830
tzn
Spc105R
Six4
CG3698
dnt
CG13086
CG17349
Fs
scb
CG2076
Vago
sev
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
TAF1C-like
MESK2
Fkbp14
CG46395
CG6118
Act88F
Ca-beta
Vm32E
CG4788
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG7065
CG9926
CG31517
Art9
Art6
Ipp
mRpL55
cdi
CG6040
ATPsynD
CG34106
beat-IIIa
CG31784
gfzf
Fer1
CG2656
CG14610
CG31493
CG31248
nub
Mp
Nc73EF
Cpr73D
mthl14
E(bx)
ftz-f1
SIFaR
ETHR
CG5892
e
lectin-28C
TwdlE
CG14535
AdamTS-A
CG13022
CG11905
CG13028
CG13023
GEFmeso
mRpS28
CG5493
CG5327
CG5323
CG42697
CG10927
VhaM9.7-d
Actn3
CD98hc
Sfp84E
Os-C
capu
ect
CG14762
Odc2
Odc1
Hers
amn
CG31787
Sfp36F
CG43362
CG42750
Fancm
for
Drgx
Pax
CG13085
Alp12
lectin-37Db
lectin-37Da
Lectin-galC1
eya
lz
c11.1
Spn28Db
Spn28Da
SmE
CG7102
CG34132
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
CG13481
MBD-R2
CG4115
CG10041
CG10038
CG44956
Svil
CG16762
sm
CG43111
bcd
Ama
zen
Esyt2
Ncc69
DAAM
CG32811
GstE9
GstE8
GstE7
GstE6
GstE5
GstE4
Idgf5
GstE3
GstE2
GstE10
GstE1
BomS6
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
CG43133
ari-1
CG43229
loj
CG10467
Ets65A
CG1428
CG1421
CG11629
CG14082
Spn75F
shep
CG3781
Spx
Rbcn-3A
CG42749
Diedel3
Ugt37B1
cort
Nse1
Nhe3
Tsp
CG11327
nAChRalpha2
CG31128
Sox21a
fbl
trbl
CG33969
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
hwt
Spn
CG32295
CG15919
CG15615
flz
plum
Ppi1
CG45073
Tpi
CG31029
TotX
Grik
hdly
CG3092
CG34274
png
MTPAP
CG12773
CG11417
Rubicon
CAH3
ana
CG8197
CG13743
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
CG43658
CG14731
CG42784
Gr89a
Decay
Cad89D
CG42342
CG1090
Wnt4
CG9171
obst-E
CG34221
syd
Srp9
CG43880
exex
Cht6
CG33557
CG2990
CG12782
Tpl94D
CG6330
Spag1
Tsp97E
Gr97a
CheB53b
CheB53a
wor
CG44869
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
CG5565
CG5561
CG5556
CG31924
Cdlc2
CG33923
CG33922
pav
ImpL2
CG14997
wdp
Gp150
CG13280
CG13272
mdy
Cse1
CG31324
CG6142
Tom40
Rab39
Pdp
nAChRalpha3
scyl
CG14383
Paip2
CG7381
CG7091
CG31342
Men
Shmt
CG3726
CG12236
CG4020
Act5C
fz3
CG16989
CG13360
tw
CG11319
RpS15Aa
Jafrac1
IP3K2
CG15747
CG6163
tx
CG6503
CG34291
lace
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
asl
kra
SecS
Rga
Atu
CG13538
RpL37b
Gr59c
CG42703
CG9876
Mrtf
Acp62F
CG42808
CG42807
CG10960
SNF4Agamma
CG43980
CG3556
Indy
CG9782
mof
Usp30
CG16721
fra
CG8818
CG8569
CG33632
achi
CG13151
GAA1
CG1077
Osi1
vig
vas
solo
TfIIS
CG33679
ck
snu
Sid
CG33346
fal
Gbs-76A
Nepl6
CG42369
dpr4
CG14708
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
GCS2alpha
insv
Elba2
ND-B17.2
Arpc5
Drp1
CG15394
Npc2b
CG9920
CCHa1
Toll-7
PK1-R
CG12402
E5
CG7329
Nmdar1
CG43845
Sin3A
Amph
ppk23
gprs
Alk
CG9014
nur
stl
blw
CycB
CG42260
CG30271
tapas
MED8
CG8929
CG4896
Tgt
CG5126
CG5001
CG12620
CG2016
Oatp30B
CG14661
Ubc6
Hr78
Est-Q
M6
Glg1
SAK
Cdk12
CG13192
CG3355
chif
CaBP1
CG4455
CG42231
CG44405
CG42266
Lasp
Dab
CG9692
CG43954
nol
NaPi-III
CG32074
CG32816
CG3777
IRSp53
CG14143
tub
CG34112
CG14646
CG9855
CG9853
CG14647
lost
bun
CG46301
CG31769
CG15293
Lk
CG34039
CG33993
Gbs-70E
l(1)G0320
RpS28b
CG32700
CG15317
osk
ScsbetaA
pyd
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
zip
uzip
sky
RPA2
Mtp
CG9272
CG43739
Ald2
tws
CG42759
TAF1B
Invadolysin
CG34303
RagA-B
CG11970
CAHbeta
Sox102F
fd102C
Egm
glu
LSm7
ChLD3
BuGZ
tou
CG5151
CG33796
CG33795
JYalpha
nerfin-2
CG33784
Alp13
CG33783
Vha44
Hmgs
Nup62
CG7997
mRpS33
ema
CG17565
CG14881
CG31279
larp
CG5819
CG9497
CG43332
CG9498
ppk7
ppk14
CG9500
axo
RhoGEF64C
CG7514
CG18418
CG15876
CG13713
robo3
fl(2)d
CG6329
CG13339
CG6347
CG6337
norpA
mei-9
mRpL33
NO66
CG12693
CG15579
HnRNP-K
stc
CG15269
CG32117
CG12520
CG14118
ktub
CG9394
sns
CG34134
CG17600
CG17601
Cluap1
CG17598
Dys
CG15025
CG10365
nau
CG10232
Gug
CG6983
Unr
obst-J
gig
CG7335
CG7328
CG6168
CG7573
Ir11a
AP-2alpha
RpI135
CG4213
mam
CSN7
w
CG43296
CG2121
CG32795
CG31823
CG31821
CG31735
Tep1