ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX100250 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◣ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Rbfox1
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
nerfin-2
CG33784
Alp13
CG33783
Wnt4
Spn28Db
Spn28Da
SmE
CG7102
CG34132
Lmpt
CG32170
Mtpalpha
jp
brwl
gcm
CG31709
CG13465
BobA
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
cmpy
CG34260
MBD-R2
CG4115
CG10041
CG10038
CG44956
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG5906
Sprn
CCDC151
CG32461
Rlip
CG5697
CG17278
CG9171
obst-E
dnc
Gycbeta100B
CG15556
CG15554
lectin-28C
TwdlE
CG14535
Ca-beta
Vm32E
CG4788
siz
abd-A
CG31275
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
Mp
TotX
Grik
hdly
Abd-B
CG11664
CG14634
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
CG6118
Act88F
Spn
CG32295
beat-IIIc
CD98hc
Sfp84E
Os-C
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
larp
Or98b
Moca-cyp
Gfat2
Hk
TfAP-2
Nc73EF
Cpr73D
mthl14
E(bx)
dnt
CG13086
CG17349
CG43055
lace
PGRP-LC
PGRP-LA
Neu2
CG7519
CG7202
croc
Cpr100A
CG15546
CG15545
GlyP
CG4259
mRpS33
ema
CG17565
CG14881
CG31279
viaf
Pop2
Grip163
CG6928
CG1077
Osi1
shot
DJ-1alpha
Syn2
CG42346
CG12009
CG12017
CG42327
CG14715
CG9497
CG9498
ppk7
ppk14
CG9500
Cyp12e1
CG46270
ome
CG4914
CG43121
CG16898
Calx
CG43446
scyl
CG13280
CG13272
mdy
Cse1
CHES-1-like
CG15478
prage
Adar
stl
blw
CycB
CG42260
CG30271
CG14762
Odc2
Odc1
ftz-f1
Usp47
DnaJ-1
Egm
CG9005
phyl
Oaz
CadN
CG4603
CG4597
CG15213
CG15212
Cyp308a1
CG10365
nau
CG10232
mof
Usp30
CG16721
SNF4Agamma
bcd
Ama
zen
RagA-B
CG11970
CAHbeta
Su(var)2-HP2
Sec61beta
Had2
CG12863
CG15429
Atet
raskol
CG3638
CG11403
Indy
CG2199
Ptp61F
312
sm
CG43277
CG42753
CG18367
CG15124
sick
CG15919
CG15615
CG13962
CG15373
Ldh
CG10163
Best2
Fancm
CARPB
CG1354
Svil
CG16762
CG10481
eya
Eh
CG14331
CG14330
caps
Scp2
CG14903
CG14891
Rrp46
Irp-1B
CG6345
CG6325
Ptpmeg2
CG3106
Men
tzn
Spc105R
Six4
CG3698
dco
Chchd3
Sox100B
CG12007
Myd88
Mes2
Kank
Lap1
CG12853
ADPS
CG10257
CG14186
CG14185
sNPF-R
Asator
CG12782
VhaM9.7-d
Actn3
Tak1
CG42579
CG8119
CG8117
CG31787
Sfp36F
CG43362
CG5790
CG14270
CG12206
CG10804
CG10803
CG10802
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
GCS2alpha
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
Cpr76Bc
Cpr76Bb
Cpr76Ba
stc
CG15269
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
GNBP2
GNBP1
Capr
CG42495
SIFaR
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
tkv
Bub1
Bsg25D
Cyp4ac3
PCB
Ntmt
CG46338
CG30010
Lime
CG12744
LanB2
CG3335
CG42268
CG8945
CG4955
wcy
CG4949
CG43077
Got1
CysRS
CG30094
CG46468
Npc2b
CG9920
CCHa1
fal
Gbs-76A
wgn
Gr89a
Decay
Cad89D
CG42342
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
CG6163
CG9380
EbpII
Ebp
Nepl19
Nepl18
Nepl17
Nepl20
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
Lasp
Dab
CG9692
CG43954
RpI135
CG4213
CG6330
Spag1
Tsp97E
Gr97a
Rubicon
CAH3
Pde1c
crol
CycY
cort
Nse1
Nhe3
Tsp
CG11327
CG13025
Nrt
CG9705
CG43980
CG43693
CG7888
mdlc
CG4390
CG17193
CG31324
CG6142
CG14417
CG14416
CG12617
CkIIalpha-i3
CG13896
CG13895
Tlk
Rala
CG2076
Vago
sev
for
Drgx
Dys
CG15025
flz
CG31823
CG31821
CG31735
Tep1
tx
CG6503
CG34291
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
CG33927
Picot
CG34458
CG34457
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
galla-2
OXA1L
CG6418
CG6409
Blos4
Mbs
Diap1
DCX-EMAP
PDZ-GEF
Fs
scb
mud
mRNA-cap
Fbxl4
CG32599
CG1434
hwt
Socs16D
CG12986
Shmt
CG3726
CG12236
CG4020
Act5C
qvr
E(Pc)
PK1-R
CG12402
CG33226
CG30287
CG30286
CG30283
RpLP2
CG8311
CG8306
Ubr1
CG8303
CG5089
Or67d
can
CG6184
CG6195
CG31220
CG31219
subdued
Vha13
Nup58
kirre
N
par-1
ham
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
east
PIG-K
asl
kra
SecS
Rga
Atu
zip
uzip
scrib
plum
goe
Twdlalpha
TwdlZ
CG32568
obe
Trissin
CG5213
cm
CG4593
CG42308
CG32736
CG3032
CG3358
piwi
TTLL4A
CG12253
SCAR
ATPsynG
Loxl1
CG11334
CG11333
CG10139
Adgf-E
RapGAP1
betaTub60D
snu
Sid
CG33346
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
Smyd5
Oga
Nelf-A
CG5862
CG3337
RpS21
CG3117
CG3104
CG2991
CG2983
wdp
Gp150
CG31064
CG42814
CG31068
CG42813
Ndae1
CG31909
CG13786
unc-5
Hr51
Sr-CII
RpS11
CG8858
Wdr62
CG31663
CG15358
Mst36Fb
CG43339
CG43338
tub
CG34112
CG14646
Pp1-13C
CG6227
CG12608
CG9855
CG9853
CG14647
lost
Fmr1
Jupiter
CG6808
CG14711
CG14710
SP1173
CG8519
mthl2
TM9SF3
Eaf6
CG10591
pzg
ppl
CG12974
AcCoAS
Cpr78Cb
Cpr78Ca
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
fl(2)d
CG6329
CG13339
CG6347
CG6337
mRpS18B
Kua
CG13970
cher
CG9896
Tao
CG14219
CG14205
CG14218
CG14204
CG42700
Cam
flr
CG10222
sens
Imp
sbr
CG15210
CG15209
Gmap
CG6340
pkaap
crp
Cyp303a1
CG17329
CG13258
velo
Ist1
CG8549
dikar
Rsph3
CG43332
CG5897
CG32117
CG12520
CG7509
CG18808
nxf4
CG43290
CG31496
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
CG14082
Lcp65Ag1
Spn75F
soti
GABA-B-R3
Eaat2
cpo
Rim
CG43445
Pax
CG13085
Alp12
lectin-37Db
lectin-37Da
Lectin-galC1
bun
meso18E
CG12531
trio
CG9205
lab
Edg84A
Ccp84Ag
Ccp84Af
Ccp84Ae
Ccp84Ad
CG1428
CG1421
CG11629
Dh31-R
CG4734
CG17047
Galphao
CG12895
Pex3
Pdi
FucTA
CG32147
CG12316
CG1902
CG30339
GstT2
GstT1
CG12926
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
CSN3
CG3288
CG13255
CG11456
Sox21a
bbx
waw
Sep1
CG34253
CG44004
ncm
RpS26
Tpst
CG46311
CG32633
CG32631
CG11816
Pez
Cpr
CG14383
Paip2
CG7381
CG7091
CG31342
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
RtcB
Rab9
stg
SP1029
CG45544
CG31445
CG42784
CG31191
Atpalpha
shep
CG42749
Eip75B
pont
Sirt6
Nuak1
Cyp12d1-d
BBS4
CG13229
ver
nst
eIF2beta
Tsf2
Pmm2
Gcn5
CG34242
Panx
CG9485
CG33655
CG30394
Prm
Fhos
CG6576
CG13306
beta3GalTII
Vps25
Gle1
CG8635
Cirl
CG8642
Srpk79D
Csp
CG11523
Rich
Ddx1
CG4991
CG16700
bt
Mef2
Den1
CG8839
CG8490
CG34021
garz
CG8841
ana3
CG14947
prd
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG7065
sky
RPA2
Mtp
CG9272
CG43739
glu
LSm7
ChLD3
BuGZ
CG9777
mthl1
SNRPG
RpS19a
Rok
Tsp68C
Hml
CG8757
CG8750
CG43184
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
AP-2alpha
CG5890
CG5886
CG14545
Lst
Cdk4
Idh3a
CoRest
CG12231
CG10562
CG10560
CG10553
CG31436
CG31099
CG31087
CG10559
CG10550
nrv3
CG8665
CG9988
CG14062
CG10011
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
Gr59d
CG13538
RpL37b
Gr59c
CG42703
CG9876
out
CG14459
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
Toll-7
lz
c11.1
CG3603
CG17959
CG14423
CG14422
CG14421
CG3092
Oatp30B
Cpr30B
CG17855
CG13114
CG13113
Ipk1
Cib2
fra
CG8818
CG8569
CG33632
achi
CG13151
CG1724
CG14579
Prp31
Msh6
CG7011
CG6878
axo
RhoGEF64C
CG7514
CG18418
CG15876
CG13713
Pex19
HnRNP-K
Snp
CG44249
CG13501
CG13500
Rab9E
CG2111
wts
dj-1beta
cindr
CG34313
CG32832
CG31743
Reg-2
CG13893
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
CG12502
Dci
dpr20
tara
Gr58c
Gr58b
CG9304
CG34029
Gr58a
ppk9
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
ex
pHCl-1
sigmar
l(2)dtl
CG5504
Alg3
Sesn
CG46429
CG18128
CG13192
Usp10
CG13907
alphaSnap
Spn77Ba
Spn77Bb
polo
retm
frj
Rchy1
CG9527
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790