ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX749040 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◣ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
dco
Chchd3
Sox100B
Mef2
Jupiter
CG6808
CG14711
CG14710
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
soti
CkIIalpha-i3
CG13896
CG13895
Sox21a
ush
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
phyl
Oaz
shop
htk
Imp
sbr
CG15210
CG15209
RapGAP1
CG43693
CG7888
CG43980
wgn
Ipk1
Cib2
CG15919
CG15615
Tak1
CG42579
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
CG34165
CG15282
CG8119
CG8117
nej
btd
Tpst
CG46311
CG32633
CG32631
CG11816
snu
Sid
CG33346
pdgy
eag
CG9030
Ldh
CG10163
Best2
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33804
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
unc-5
Hr51
Su(var)2-HP2
Sec61beta
Had2
CG12863
mtSSB
CG6126
CG31287
CG34268
CG34267
gol
bcd
Ama
zen
Eip75B
PDZ-GEF
Pzl
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
Reg-2
CG13893
CARPB
CG1354
Gr89a
Decay
Cad89D
CG42342
Npc2b
CG9920
CCHa1
bor
asun
Mst89B
RpLP2
CG8311
CG8306
CG8303
CG5089
EcR
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
Wnt4
nxf4
CG43290
CG31496
Ndae1
CG31909
CG13786
dar1
CG14974
CG10359
CG10357
CG44439
CG30369
CG2291
CG14760
CG14759
CG7956
CG33226
CG30287
CG30286
CG30283
mRpS18B
Kua
CG13970
CG3358
Socs16D
CG12986
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
CG9171
obst-E
CG12007
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
Cyp12d1-d
BBS4
CG13229
Prm
Fhos
CG6576
CG13306
HisRS
Ggt-1
CG6470
Bx
CG6481
Syn2
pkaap
crp
Cyp303a1
CG17329
CG13258
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
Fmr1
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
CG42354
CG42353
Zasp52
CG33465
CadN
CG2016
CG1124
Cda5
galectin
dbr
CG11374
CAH15
otp
Rx
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
Obp99d
Dup99B
CD98hc
Sfp84E
Os-C
CG13280
CG13272
mdy
Cse1
Edg91
CG34281
CG14329
CG14327
CG14326
CG14324
CG14323
AttD
CG14325
Nc73EF
Cpr73D
Pde8
retn
cnn
cbs
CG30062
Dys
CG15025
raskol
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
sick
CG10481
Mst36Fb
CG43339
CG43338
kl-5
shot
DJ-1alpha
CG42700
Cam
for
Drgx
ham
CG16898
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
mof
Usp30
CG16721
Indy
Men
upd2
Mtpalpha
jp
brwl
gcm
CG31709
Svil
Spn
CG32295
CG10365
nau
CG10232
Ptpmeg2
CG3106
mRpS33
ema
CG17565
CG14881
CG31279
mtd
Tim17b1
InR
CG6118
Act88F
DNaseII
CG7785
CG7794
Fancm
Cpr100A
CG15546
CG15545
Rubicon
CAH3
siz
cmpy
CG34260
CG31036
CG15517
CG15515
CG31038
RagA-B
CG11970
CAHbeta
Lk
CG34039
CG42758
Pde1c
crol
CycY
CG7763
CG34054
CG30026
Smyd4-3
fra
CG8818
CG8569
CG33632
achi
CG13151
CG31275
Spn28Db
Spn28Da
SmE
CG7102
CG34132
Sr-CII
RpS11
CG8858
Gsc
CG13689
RpS28a
Mgat2
CG7920
Axn
tapas
MED8
CG8929
Abd-B
VhaM9.7-d
Actn3
CG14762
Odc2
Odc1
retm
frj
Rchy1
CG9527
TfAP-2
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
CG42327
CG14715
lectin-28C
TwdlE
CG14535
CG2199
Ptp61F
312
Sytalpha
Oli
CG6870
CG46301
CG31191
Atpalpha
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
Pdp1
CG7509
CG18808
Tsp68C
Hml
CG8757
CG8750
CG43184
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
piwi
TTLL4A
CG12253
SCAR
ATPsynG
Pex7
CG13305
Arr2
azot
CG30378
rnh1
drosha
PIG-X
CG8728
CG34431
CG34430
CG30380
CG30379
cort
Nse1
Nhe3
Tsp
CG11327
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
CHES-1-like
CG15478
bowl
bark
CG31960
CG9896
mthl2
TM9SF3
Eaf6
CG10591
Gpa2
flr
CG10222
sens
sm
out
CG43277
CG42753
CG18367
CG15124
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
stc
CG15269
sim
CG43063
CG42784
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
CG34253
CG44004
kirre
N
Eh
CG14331
CG14330
stg
SP1029
CG45544
CG31445
CG31324
CG6142
lace
dnc
eya
CG16762
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
bbx
waw
Sep1
SNF4Agamma
cpo
Rim
CG43445
CG42268
Cyp12e1
CG46270
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
Poc1
ImpL1
CG14110
CG14107
CG10171
mamo
ben
Ste12DOR
CG42673
CG13192
galla-2
OXA1L
CG6418
CG6409
Blos4
cher
Cht6
CG33557
CG2990
scyl
Rlip
CG5697
CG17278
mdlc
CG4390
CG17193
Prat2
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
CG5568
CG18586
Lasp
Dab
CG9692
CG43954
larp
Or98b
Moca-cyp
Gfat2
CG12617
Myd88
tzn
Spc105R
Six4
CG3698
obe
Trissin
CG5213
fal
Gbs-76A
wdp
nol
NaPi-III
CG32074
Asator
Sod1
mRpL2
Ufd1-like
FoxK
Gp150
sol
peng
unk
VhaAC39-2
CG13829
Irk1
tbrd-1
TfIIA-S
Pli
ftz-f1
Ca-beta
qvr
E(Pc)
Vm32E
CG4788
CG43332
ncm
RpS26
Prp31
Msh6
CG7011
CG6878
Ten-a
Usp7
Cyp318a1
Cyp311a1
abd-A
ninaA
dbe
aru
PNUTS
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
GCS2alpha
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
Scp2
CG14903
CG14891
CG9220
Alp11
CG42749
Rgk3
ASPP
Wdr62
CG31663
CG15358
PGRP-LC
PGRP-LA
CG43233
CG31683
CG18858
Cdc23
CG2493
GILT3
GILT2
RpS21
CG3117
CG3104
CG2991
CG2983
SPE
eIF3d1
CG18754
CG16710
Kank
Lap1
CG12853
ADPS
CG10257
CG42346
velo
Ist1
CG8549
dikar
Rsph3
mthl14
E(bx)
CG14186
CG14185
sNPF-R
Pex3
Pdi
FucTA
CG32147
CG12316
HnRNP-K
NtR
GM130
CG34205
a
gom
CG11269
CG12730
prage
Adar
CG14270
CG12206
CG10804
CG10803
CG10802
Cpr76Bc
Cpr76Bb
Cpr76Ba
GABA-B-R3
Eaat2
CG13962
GNBP2
GNBP1
Capr
CG42495
Shmt
CG3726
CG12236
CG4020
Act5C
CG15429
Atet
Lst
Cdk4
ome
CG4914
CG43121
Cyp308a1
RSG7
CG13003
Lmpt
flz
Fs
scb
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
east
PIG-K
ver
nst
eIF2beta
Tsf2
Pmm2
Gcn5
CG34242
dup
SRPK
Pms2
CG3603
CG17959
CG14423
CG14422
CG14421
CG32170
CG32264
Neu2
CG7519
CG7202
croc
RpL37a
MBD-R2
CG4115
CG10041
CG10038
CG44956
shep
Smyd5
Oga
Nelf-A
CG5862
CG3337
CG15130
CG10949
Arpc2
CG10947
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
CG33128
CG31928
CG31926
CG31661
CG18131
tara
Timp
Got1
CysRS
CG30094
Act57B
dnt
CG13086
CG17349
CG46468
Mipp1
CG43206
CG4229
Picot
CG34458
CG34457
axo
RhoGEF64C
CG7514
CG18418
CG15876
CG13713
fiz
Eo
CG14406
CG12398
CG9512
Toll-7
Gr59d
RpI135
CG13538
CG3638
CG11403
RpL37b
Gr59c
CG42703
CG9876
CG4213
Gr98d
Gr98c
Gr98b
slbo
bs
SiaT
RunxA
nerfin-2
CG33784
Alp13
Mbs
Diap1
Cnx99A
dila
CG30001
CG44666
CG43711
CG43710
CG43667
CG43666
CG43709
CG13443
PK1-R
CG12402
Chs2
CG7458
His1:CG33801
His2B:CG17949
CG3355
Oatp30B
par-1
Cpr30B
CG17855
CG13114
CG13113
TyrRII
CG14321
Lgr1
Atg8b
par-6
CG8188
chas
fax
TMS1
GluRS-m
TyrRS
CG33158
Srpk79D
Csp
CG11523
Rich
Ddx1
insv
CG3556
Elba2
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
CG9988
CG14062
CG10011
CG6300
CG11659
CG11453
CG11407
CG11391
Cyp309a2
Sws1
Rad1
Cyp309a1
CG18545
jumu
CG31406
CG12592
sle
CG9018
ACXD
Oseg2
CG32301
Ref1
Dpck
CG1943
fz2
Ufl1
CG1965
CG1105
CG1902
CG30339