ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX671941 | 5-13h embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◣ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
Sox21a
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
soti
Ipk1
Cib2
CkIIalpha-i3
CG13896
CG13895
EcR
CG34268
CG34267
ush
CG43980
CG44666
CG43711
CG43710
CG43667
CG43666
CG43709
CG13443
dar1
CG14974
CG10359
CG10357
dco
Chchd3
Sox100B
His1:CG33816
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
CG2016
CG1124
Ppcs
Cyp12a5
Cyp12a4
MetRS
Jheh1
CG18190
CG15084
Jheh2
Jheh3
DptB
DptA
CG43071
CG43070
CG43069
CG43109
CARPB
CG1354
RapGAP1
Jupiter
CG6808
CG14711
CG14710
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33852
beat-IV
CG10164
Mef2
CG12007
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
CG34165
CG15282
bor
asun
Mst89B
CG12506
Gr21a
CG13947
CG13946
Sox102F
fd102C
TfAP-2
CG3358
CG44439
CG30369
CG2291
CG14760
CG14759
CG43658
nAChRalpha4
Wnt4
bcd
Ama
zen
mtSSB
CG6126
CG31287
His1:CG33804
loopin-1
InR
Tif-IA
CG18518
CG43693
CG7888
RpLP2
CG8311
CG8306
CG8303
CG5089
nxf4
CG43290
CG31496
CG14411
CG14408
rut
His1:CG33807
His1:CG33861
His1:CG33858
His1:CG33855
His1:CG33819
His1:CG33810
Ldh
CG10163
Best2
CAH15
otp
Rx
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
toc
Pde8
retn
Gr89a
Decay
Cad89D
CG42342
CTCF
pst
Sec63
qm
Srp19
CG14834
CG45770
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
CG46193
unc-5
Hr51
snu
Sid
CG33346
Imp
sbr
CG15210
CG15209
CG46301
His4:CG33869
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
beat-Vb
htl
CCY
aurB
Stam
Dnz1
CG12517
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
shop
htk
CG5290
His1:CG33801
lectin-28C
TwdlE
CG14535
Ndae1
CG31909
CG13786
DNaseII
CG7785
CG7794
OdsH
CG16898
vis
fdl
s-cup
Pzl
CG33217
CG30389
Hmg-2
Xbp1
CG15657
Tpst
CG46311
CG32633
CG32631
CG11816
CG31275
Gsc
CG13689
mgl
CG34028
Ir11a
rdx
CG2577
sls
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
CG3649
RpL23
CG13531
His4:CG33875
His4:CG33873
His4:CG33871
CG33308
CG33309
CG12490
CG9826
CG9825
His4:CG33881
His4:CG33879
His4:CG33877
CG17570
Zip102B
CG32850
Maf1
beat-IIa
CG14120
bowl
bark
CG31960
insv
Elba2
ND-B17.2
Arpc5
Cyp309a2
Sws1
Rad1
Cyp309a1
BomT1
CG41562
CG46443
bbg
CG10752
CG31206
CG10887
Gr92a
Or69a
Ir40a
His2B:CG17949
MFS9
Or92a
Spn28Dc
CG12560
Glyat
Tg
CG40191
CG43179
CG9616
CG43291
mtt
AstC-R2
Tak1
CG42579
uex
stg1
CG11566
JYalpha
CG4892
CG34168
CG12477
CG8112
TMEM216
Cks85A
CG13473
CG17684
CG6168
CG17601
His2B:CG33868
His1:CG33831
His1:CG33828
His1:CG33825
His1:CG33822
Dop1R2
CG7800
CheA84a
vvl
SPoCk
Pde11
puc
CG15160
CG10822
CG44623
CG44622
CG7910
CG7900
CG18469
CG12699
kl-2
CG40813
Or56a
Obp56g
CG7763
CG34054
CG30026
Drip
Cda5
CG3176
CG34297
zen2
pb
CG43125
CG43124
CG42784
Hsp60D
CG46308
CG42810
CG42809
CG4116
CG32816
Pgcl
Cyp6a9
Cyp317a1
Cyp6a20
Cyp6a8
Cyp6a21
shot
CG12730
CG33128
CG31928
CG31926
CG31661
CG18131
Tbce
SCAP
CG14591
CG34211
CG42323
Nipped-B
CG13989
CG6290
CG43841
CG32551
CG32548
Muc26B
CG31639
CG12362
conu
CG42336
CG7741
Obp47b
Fpps
Fbl6
dare
CG30033
CG18336
CG18335
CG7745
Cenp-C
5-HT2B
CG40045
spz6
CG3894
CG3880
CG12848
GstE12
PVRAP
alphaKap4
CG33645
CG33644
CG33643
png
MTPAP
CG12773
CG11417
CG33642
Aldh
CG33641
CG33640
CG4438
for
His4:CG33907
His2A:CG33859
His2A:CG33856
His2A:CG33853
CG11760
CG46457
CG12538
Act57B
Snoo
CG7231
EMC4
CG11109
Arf79F
CG33170
CG33169
CG13239
eIF4E1
CG4080
Hsp27
CG5084
CG10910
prc
Muc68E
CG42397
CG43896
CG14125
Liprin-gamma
Mob2
CG7394
CG46412
CG33267
CG11298
CG33490
Ac78C
CG7695
CG12426
CG14305
spdo
Obp18a
tgy
PH4alphaSG2
Jon99Fii
Jon99Fi
CG32115
CG40470
Or82a
CG1092
TwdlG
TwdlV
CG14644
CG15638
cic
Eip78C
CG7548
CG7546
Cyp4d8
CG8539
Lar
CG40635
lovit
mamo
ppk21
CG17944
veil
CG30103
NT5E-2
CG43110
Cpr67B
Osbp
Ir67a
Or67a
Mink
CG11771
Trf4-2
CG33700
CG11168
Men-b
CG6051
Mrtf
Ir93a
CG15696
RpS30
KaiR1D
plh
inc
CG14795
side-VI
stau
CG5756
CG34196
CG33669
Mst84Dd
CG44438
fz
spir
CG2616
CG43254
CG10949
Arpc2
CG10947
Sod1
mRpL24
betaggt-I
CG14044
hoe1
CG31460
APP-BP1
mRpS18A
Iyd
Irbp18
CG46439
CG33947
Elo68beta
Elo68alpha
hoe2
Sgs1
CG32073
CG12522
CG32071
CG7638
CG34012
mtDNA-helicase
RpS2
Bka
atms
CG13124
tacc
Muc30E
CG42673
Nedd4
Edc3
U4-U6-60K
CG7564
Gfat1
CG32369
CG2233
Cluap1
Mst77Y-4
Mst77Y-9
CG1358
dnt
CG13086
CG2076
Vago
Hsp60A
CG42249
CG2061
TTLL1A
CG5070
CG32564
CG12446
CG4942
CG4911
teq
mtd
jing
sbb
Pde1c
CG45494
CG45493
CG45488
CG43784
CG45491
CG45489
CG45487
CG45492
CG45490
Abd-B
Rubicon
CAH3
VhaM9.7-d
Actn3
DJ-1alpha
sick
Neu2
CG7519
CG7202
kirre
N
Su(var)2-HP2
Sec61beta
Had2
CG12863
CG42700
Svil
Spn
CG32295
mof
Usp30
CG16721
croc
Ptpmeg2
CG3106
Cam
CG10481
Fancm
CG8119
CG8117
CG16762
CHES-1-like
CG15478
Nc73EF
Cpr73D
prage
Adar
mRpS33
ema
CG17565
CG14881
Indy
Socs16D
CG12986
wgn
CG31279
stl
blw
CycB
CG42260
CG30271
Shmt
CG3726
CG12236
pkaap
crp
Cyp303a1
CG17329
CG13258
CG4020
Act5C
Ubr1
CG8945
CG4955
crol
CycY
nej
btd
wcy
CG4949
CG43077
Tsp68C
Hml
CG8757
CG8750
CG43184
Npc2b
CG9920
CCHa1
lace
lectin-46Cb
lectin-46Ca
CG34033
CG1648
siz
Dys
RpS28a
Mgat2
CG7920
Axn
nAChRalpha6
Fkbp59
CG4537
CG34183
CG31191
Atpalpha
dnc
CG33226
CG30287
CG30286
CG30283
Prm
Fhos
CG6576
CG13306
CG14762
PDZ-GEF
CG15429
Atet
Odc2
Odc1
Sur-8
CREG
slbo
bs
GILT3
GILT2
RpS21
CG3117
CG3104
CG2991
CG2983
CG9380
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
mthl14
E(bx)
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
EbpII
Ebp
Drgx
beat-IIIc
Lasp
Dab
CG9692
CG43954
SNF4Agamma
CG9171
CG15025
CG7956
fal
Gbs-76A
cmpy
CG34260
CG14186
CG14185
Wdr62
sNPF-R
SPE
CG13192
Scp2
CG14903
CG14891
obst-E
gol
eIF3d1
CG18754
CG16710
CG1688
CG15919
LanB2
Toll-7
rtv
Ran
Lint-1
Dlic
CG32668
Fmr1
CG15201
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
CG3335
CadN
Eip75B
wdp
CG9497
CG31663
CG15358
sced
geminin
Opbp
Dpit47
Adf1
GABA-B-R3
Eaat2
nol
NaPi-III
CG32074
Mtpalpha
Eh
CG14331
CG14330
jp
brwl
zip
uzip
CG15615
larp
ham
CG9410
CG15908
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG5890
CG5886
CG14545
Got1
CysRS
CG30094
stc
CG15269
viaf
Pop2
Grip163
CG6928
RpL37a
Rrp46
Irp-1B
CG6345
CG6325
ind
Rpn12R
CG43678
CG13465
BobA
CG5565
CG5561
CG5556
CG31924
CG13962
Asator
CG6118
mRpL2
Ufd1-like
FoxK
Mst36Fb
CG43339
Gp150
CG10365
CG9018
ACXD
Spn28Db
Spn28Da
SmE
CG7102
CG34132
CG43338
Act88F
stg
SP1029
CG45544
CG31445
NLaz
CG31659
CG14346
ms(3)K81
SPARC
Rb97D
CG5500
nau
CG10232
CG13280
CG13272
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
Oseg2
abd-A
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
Sr-CII
RpS11
CG8858
Or98b
Moca-cyp
Gfat2
Egm
dila
CG30001
Lk
CG34039
CG12009
CG12617
cpo
CG12017
Myd88
Cpr100A
CG15546
CG15545
flr
CG10222
tbrd-1
TfIIA-S
Pli
CG42758
Rim
CG43445
mdy
Cse1
Syn2
CG9005
cort
Nse1
Nhe3
Tsp
cm
CG4593
CG42308
CG32736
CG3032
Usp47
DnaJ-1
sim
CG43063
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
ball
Lerp
IntS12
His2Av
AP-2alpha
caps
CG42268
sens
CG11327
CG2841