ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX14474253 | Cultured cell lines
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◣ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

MFS17
CG5062
CG8945
CG4955
wcy
CG4949
CG43077
Ubr1
CARPB
CG1354
CG43407
Ugt316A1
Sfxn2
nkd
Acp76A
sr
salr
Ipk1
Cib2
mib1
mRpS31
hzg
Abd-B
VhaM9.7-d
Actn3
gsb-n
gsb
GlyP
CG4259
wor
CG44869
fl(2)d
CG6329
CG13339
CG6347
CG6337
CG6163
Rubicon
CAH3
CG13465
BobA
vvl
mRpS33
ema
CG17565
CG14881
CG31279
ftz-f1
CG5151
CG33796
CG33795
scrib
plum
tub
CG34112
CG14646
CG9855
CG9853
CG14647
lost
Cda5
galectin
dbr
CG11374
Fas3
sgg
Pdp1
btsz
dock
PGAP2
Clp
CG3862
CG3662
CG15880
Saf6
Pex12
Dbp21E2
Nnf1b
Toll-7
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
Fmr1
Lasp
Dab
CG9692
CG43954
Svil
CG43693
CG7888
CG16762
CG42700
Cam
Nc73EF
Cpr73D
MBD-R2
CG4115
CG10041
CG10038
CG44956
Myd88
mub
CG9896
Pde1c
crol
CycY
RpS21
CG3117
CG3104
CG2991
CG2983
caps
primo-2
primo-1
kmr
Ubc87F
CG31469
Adgf-D
Adgf-C
ZnT77C
ND-39
CG5078
CG32425
CG18281
CG17637
CG9593
alpha-Man-IIb
stl
blw
CycB
CG42260
CG30271
Ptpmeg2
CG3106
lectin-28C
TwdlE
CG14535
Tlk
HIP-R
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
Vha44
Hmgs
Nup62
CG7997
insv
Elba2
ND-B17.2
Arpc5
Drp1
CG15394
CG14947
prd
Mef2
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
TAF1C-like
MESK2
Fkbp14
CG46395
Shmt
CG3726
CG12236
CG4020
Act5C
fiz
Eo
CG14406
CG12398
CG9512
CASK
Gr93a
Neu2
CG7519
CG7202
croc
Pex19
SmydA-2
CG3808
CG18135
CG34256
CG11619
egl
CG5532
CG34105
CG13560
CG12491
CG11300
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
HisRS
Ggt-1
CG6470
Bx
CG6481
shot
DJ-1alpha
bun
RpS20
CG17272
CG17271
CG31223
AdSS
Synd
CG13192
CG15130
CG10949
Arpc2
CG10947
CG5116
XNP
CG42488
Dhap-at
CG5112
CG33494
unc-5
Hr51
CG34172
CG10874
mthl14
E(bx)
Usp47
DnaJ-1
CSN3
CG3288
CG13255
CG11456
pkaap
crp
Cyp303a1
CG17329
CG13258
svp
Sfp87B
CG17738
kirre
N
CG3588
CG34268
CG34267
mtd
CG31538
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
Got1
CysRS
CG30094
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
esn
Su(var)2-HP2
Sec61beta
Had2
CG12863
Gmap
Esyt2
Tpst
CG46311
CG32633
CG32631
CG11816
Dll
CG42851
sky
RPA2
Mtp
CG9272
CG43739
capu
CG31275
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
unk
VhaAC39-2
CG13829
Irk1
CG46310
Lmpt
CG13025
Nrt
CG9705
pk
Spn43Aa
CG12828
nec
Spn43Ad
Spn43Ab
RunxA
CG9497
Pez
Cpr
scyl
ap
CG3358
Vps29
Tfb4
l(2)10685
MFS3
Iris
CG4577
CG5906
Sprn
CCDC151
InR
lz
c11.1
par-1
Smyd5
Oga
Nelf-A
CG5862
CG3337
Indy
RpLP2
CG8311
Lst
Cdk4
RpS28a
Mgat2
CG7920
Axn
vri
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
CG34313
CG32832
CG31743
tweek
CG6115
CG42556
Eip75B
CG31522
CG31523
Prat2
dnt
CG13086
CG17349
stc
CG15269
stg
SP1029
CG45544
CG31445
chif
CaBP1
CG4455
CG42231
CG44405
CG42266
qvr
E(Pc)
larp
qjt
CG13733
CG6333
edin
Oatp74D
Rrp46
Irp-1B
CG6345
CG6325
velo
Ist1
CG8549
dikar
Rsph3
CG15403
CG31064
CG42814
CG31068
CG42813
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
Fancm
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
por
CG6179
betaCOP
Tsf1
mthl2
TM9SF3
Eaf6
CG10591
Dscam1
osk
ScsbetaA
pyd
mof
Usp30
CG16721
Mbs
Diap1
lectin-46Cb
lectin-46Ca
CG34033
CG1648
dila
CG30001
Mtpalpha
jp
brwl
gcm
CG31709
AP-2alpha
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
ex
Rlip
CG5697
CG17278
rpr
Spn
CG32295
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
Npc2b
CG9920
CCHa1
PK1-R
CG12402
Cyp6a18
Dif
CG5043
CG33928
galla-2
OXA1L
CG6418
CG6409
Blos4
Srpk79D
Csp
CG11523
Rich
Ddx1
Mrtf
Acp62F
His4:CG33881
His4:CG33879
His4:CG33877
prage
Adar
l(1)G0007
l(1)G0469
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
Sarm
CG42591
CG42590
Pex3
Pdi
FucTA
CG32147
CG12316
mnb
Gss2
Gss1
CG6788
CG12985
Jupiter
CG6808
CG14711
CG14710
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
dsx
Sur
Snx17
RpL7
Ripalpha
CG5731
CG5727
CG34159
Fum4
CG31191
Atpalpha
dco
Chchd3
Sox100B
slim
Ttd14
CG5189
CG30120
Prp19
rswl
CG17669
GluProRS
CG31140
AP-1sigma
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
beat-IIIc
ms(3)K81
SPARC
Rb97D
CG5500
ball
Lerp
IntS12
His2Av
Glut3
Nedd4
Edc3
eg
CG43895
Prp31
Msh6
CG7011
CG6878
CG2841
mthl13
CG33144
CG9650
viaf
Pop2
Grip163
CG6928
tbrd-1
TfIIA-S
Pli
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG7065
zip
uzip
CG5890
CG5886
CG14545
nsl1
CG1688
fru
Loxl1
CG11334
CG11333
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
Obp99d
Dup99B
upd2
CG31698
CG15404
Pde8
retn
Atf3
muc
CG5958
CG1142
CG9932
ush
CG34460
CG34459
GNBP2
GNBP1
Capr
CG42495
DCX-EMAP
ninaA
dbe
aru
PNUTS
RhoGEF3
miple2
CG32845
ttm2
Awh
JYalpha
mRpL14
Raf
Ilp6
Scp2
CG14903
CG14891
fra
CG8818
CG8569
CG33632
achi
CG13151
Sr-CII
RpS11
CG8858
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
fal
Gbs-76A
soti
jim
CG45428
CG11226
mam
CG18371
Egm
CG9005
ATPsynCF6
Sec13
pnt
DNApol-epsilon255
RpS15Aa
Jafrac1
IP3K2
CG15747
ko
CG33285
SmydA-4
CG42339
CG1552
CG12617
mIF2
Ppn
tzn
Spc105R
Six4
CG3698
Rel
Nmdmc
Mst85C
Kdm2
cm
CG4593
CG42308
CG32736
CG3032
CG8306
CG8303
CG5089
dup
SRPK
Pms2
TwdlX
CG34325
CG32572
Reg-2
CG13893
CG17698
Nmdar1
CG43845
Itpr
LanB2
CG3335
Hr3
Hdc
CG46321
CG12912
CG12782
Lim1
CG13229
shn
Gug
CG6983
Unr
Ir100a
Mccc1
Acf
snu
Sid
CG33346
Or67d
can
CG14500
CG14499
CG33958
TwdlC
RYa-R
CG31076
CG31075
CG14253
CG31077
tey
wts
dj-1beta
cindr
eEFSec
CG10795
Acox57D-p
Acox57D-d
cv-2
fray
CG7694
qin
Sox102F
MED26
h
SmD3
Oda
CG34232
Prp8
CG13177
EndoG
CCT5
Ir60a
nord
tkv
Bub1
Bsg25D
Cyp4ac3
Wdr62
CG31663
CG15358
CG12075
Moe
CrebB
CG6123
CG6106
CG6184
CG6195
CG31220
CG31219
subdued
Vha13
Nup58
Sox21a
CG32521
CG1494
Gr58c
Gr58b
CG9304
CG34029
Gr58a
ppk9
dgt4
cib
brn
Xpac
Nsun2
CG6379
CG15375
CG13280
CG13272
mdy
Cse1
RhoGAP100F
Rift
FeCH
CG42233
CG1971
Ca-beta
Vm32E
CG4788
nej
btd
CTCF
qm
Srp19
CG14834
trio
CG9205
lark
eco
Cln7
Vps24
cpx
MP1
Nepl11
GstD7
GstD6
GstD5
GstD4
GstD9
GstD3
GstD2
GstD1
Tim17a1
GstD10
Nepl19
Nepl18
Nepl17
C15
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
CG43055
CG8300
CG4617
CG4615
fz4
CAP
Tbce
SCAP
CG14591
nrv1
ND-15
CG4822
CG13694
Gs1
CG3164
ich
dah
Top1
HDAC6
CG9114
Ythdc1
Ids
CG12012
CG12010
CG9331
CG31674
CG31673
CheB38c
CheB38b
CheB38a
CG33322
Tet
pyx
Kaz1-ORFB
CG13877
CG42846
CG34454
CG34453
CG33229
CG34222
dve
CG3092
Cyp9b2
Cyp9b1
milt
Rab30
Caper
Gsc
CG13689
sigmar
l(2)dtl
CG5504
Alg3
Sesn
CG46429
CG18128
Exn
Rpn13
Cp1
CG42806
PheRS-m
St4
CG18568
AGO1
glu
LSm7
ChLD3
BuGZ
Fas1
CG17560
CG14905
CG14893
Pax
CG13085
Alp12
lectin-37Db
lectin-37Da
Lectin-galC1
tara
lawc
Trf2
PIG-T
Pgk
Cwc25
CG9961
Tnpo-SR
Bacc
Snapin
HemK2
bi
cort
Nse1
Nhe3
CG34310
Spn27A
Galt
cup
CG13771
rols
zld
CG42354
CG42353
dati
repo
CG7156
14-3-3epsilon
Mdh2
CG7168
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
CG9777
mthl1