ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX14474261 | Cultured cell lines
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◣ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

Ubr1
CG42700
Cam
CG14082
Spn75F
capu
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
DCX-EMAP
CG34106
beat-IIIa
CG31784
CG43693
CG7888
CG31823
CG31821
CG31735
Tep1
CG5062
CG8945
CG4955
wcy
CG4949
CG43077
fiz
Eo
CG14406
CG12398
CG9512
Cyp6a18
Gr98a
Abd-B
VhaM9.7-d
Actn3
mbl
CG43237
sr
GILT3
GILT2
RunxA
CG31145
Mef2
CG2841
Eip75B
Neu2
CG7519
CG7202
croc
Cda5
galectin
dbr
CG11374
osk
ScsbetaA
pyd
CG13465
BobA
CG3588
Glut3
Cyp308a1
GlyP
CG4259
CG5906
Sprn
CCDC151
Sarm
CG42591
CG42590
CARPB
CG1354
gsb-n
gsb
salr
ko
CG33285
mub
Dscam1
Rh50
CG43407
Ugt316A1
Sfxn2
nkd
Acp76A
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
CG6168
CG7573
CG31698
CG15404
Rubicon
CAH3
Su(var)2-HP2
Sec61beta
Had2
CG12863
CG13025
Nrt
CG9705
shot
DJ-1alpha
rpr
CG5151
CG33796
CG33795
unk
VhaAC39-2
CG13829
Irk1
CG46310
beat-IIIc
Or67d
can
mnb
Gss2
Gss1
CG6788
CG12985
fl(2)d
CG6329
CG13339
CG6347
CG6337
Gycbeta100B
CG15556
CG15554
CG34222
chif
CaBP1
CG4455
CG42231
CG44405
CG42266
Fancm
Nc73EF
Cpr73D
CG31275
Nlg3
MFS17
pip
prage
Adar
Pdp1
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
sky
RPA2
Mtp
CG9272
CG43739
RpS15Aa
Jafrac1
IP3K2
CG15747
ftz-f1
CG5674
qjt
CG13733
CG6333
edin
Oatp74D
CG1090
CG6163
Npc2b
CG9920
CCHa1
PK1-R
CG12402
scrib
plum
snu
Sid
CG33346
mtd
CG31538
Mrtf
Acp62F
yin
CG2930
VhaAC39-1
Fmr1
stx
ras
ap
larp
bru2
ETHR
CG5892
CG13022
CG11905
CG13028
CG13023
CG15373
pHCl-1
Indy
Ipk1
Cib2
Got1
CysRS
CG30094
Tpst
CG46311
CG32633
CG32631
CG11816
TAF1C-like
MESK2
Fkbp14
CG46395
l(1)G0007
l(1)G0469
caps
SmydA-4
CG42339
CG1552
Vha44
Hmgs
Nup62
CG7997
CG43759
lz
c11.1
esn
Smyd4-4
SkpB
OSCP1
Hen1
CG18343
CG8878
viaf
Pop2
Grip163
CG6928
Irk2
CG34289
CG31787
Sfp36F
CG43362
CG42750
RpS21
CG3117
CG3104
CG2991
CG2983
CG18557
CrebB
CG6123
CG6106
kirre
N
Gr58c
Gr58b
CG9304
CG34029
Gr58a
ppk9
CG14947
prd
Pex19
Ptpmeg2
CG3106
insv
Elba2
ND-B17.2
Arpc5
Drp1
CG15394
Cyp12d1-d
BBS4
Cyp12d1-p
MBD-R2
CG4115
CG10041
CG10038
CG44956
Tak1
CG42579
CG31064
CG42814
CG31068
CG42813
CG16800
Vha68-3
Vha68-2
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
sgg
CASK
Gr93a
wor
CG44869
SNF4Agamma
fal
Gbs-76A
nerfin-2
CG33784
Alp13
CG33783
TwdlX
CG34325
CG32572
mib1
mRpS31
hzg
CG18063
CG12448
ktub
CG9394
Fas3
Ir92a
Scp2
CG14903
CG14891
scyl
CG3092
yip3
Lasp
Dab
CG9692
CG43954
wts
dj-1beta
cindr
bbg
RapGAP1
CG13280
CG13272
mdy
Cse1
CG33927
CG14417
CG14416
CG15414
CG42747
Shmt
CG3726
CG12236
CG4020
Act5C
Esyt2
tub
CG34112
CG14646
CG9855
CG9853
CG14647
lost
eg
CG43895
ect
lectin-28C
TwdlE
CG14535
Egm
tou
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
galla-2
OXA1L
CG6418
CG6409
Blos4
vvl
mthl14
E(bx)
CG5897
Rlip
CG5697
CG17278
CG34007
Nedd4
Edc3
CG12075
Moe
CG43055
trn
Pax
CG13085
Alp12
lectin-37Db
lectin-37Da
Lectin-galC1
dnt
CG13086
CG17349
HP5
Evi5
CG43155
Svil
CG16762
Vps29
Tfb4
l(2)10685
MFS3
Iris
CG4577
Spn
CG32295
SmydA-2
CG3808
CG18135
CG34256
CG11619
pkaap
crp
Cyp303a1
CG17329
CG13258
Mbs
Diap1
ND-15
CG4822
CG13694
Gs1
CG3164
Usp47
DnaJ-1
CG4161
Gmap
ich
Rrp46
Irp-1B
CG6345
CG6325
ZnT77C
ND-39
CG5078
CG32425
CG18281
CG17637
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
Lmpt
Exn
CG5890
CG5886
CG14545
Toll-7
hog
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
dx
RpL7A
Spat
CG42340
CG3918
CG3342
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
soti
cmpy
CG34260
btsz
CG15130
CG10949
Arpc2
CG10947
Myd88
CG9896
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
HisRS
Ggt-1
CG6470
Bx
CG6481
egl
CG5532
CG34105
CG13560
CG12491
CG11300
mRpS33
ema
CG17565
CG14881
CG31279
Mp
Galphao
CG12895
futsch
mthl2
TM9SF3
Eaf6
CG10591
fz2
svp
Sfp87B
CG17738
CG9005
stl
blw
CycB
CG42260
CG30271
SPE
eIF3d1
CG18754
CG16710
CG31952
CG8840
CG34175
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
RpLP2
CG8311
Lst
Cdk4
CG9932
RpS20
CG17272
CG17271
CG31223
AdSS
Synd
CG5116
XNP
CG42488
Dhap-at
CG5112
CG33494
CAH15
otp
milt
Rab30
Caper
mthl13
CG33144
Aps
LanB2
CG3335
mof
Usp30
CG16721
sick
CG10481
Pde1c
crol
CycY
CG1142
dco
Chchd3
Sox100B
CG34324
Sox21a
CG34274
unc-5
Hr51
ssp6
CG6610
CG13295
CG13293
UQCR-Q
SecCl
QIL1
CG34250
CG8306
CG8303
CG5089
Unc-115a
Unc-115b
eca
CG32939
CG18542
p24-2
Ten-a
Tlk
HIP-R
ush
sns
CG9650
InR
zip
uzip
salm
dati
CG5790
CG3556
Cyp9b2
Cyp9b1
CG31191
Atpalpha
Lk
CG34039
CG42758
RpS28a
Mgat2
CG7920
Axn
dock
PGAP2
Clp
CG3862
CG3662
CG15880
Saf6
Pex12
Dbp21E2
Nnf1b
vri
CG33970
CG15548
mRpL14
Raf
Ilp6
tbrd-1
TfIIA-S
Pli
CG9593
alpha-Man-IIb
nsl1
tey
betaTub60D
Fatp1
CG7384
CG6094
Myo31DF
Lrr47
CG42354
CG42353
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
dup
SRPK
Pms2
pont
Sirt6
Nuak1
hts
CalpA
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
CSN3
CG3288
CG13255
CG11456
jing
CG12617
TwdlC
RYa-R
CG31076
CG31075
CG14253
CG31077
NetA
Pura
Mtpalpha
jp
brwl
gcm
CG31709
nej
btd
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
l(2)k05819
Vps53
Tps1
Psf2
CG3652
Dim1
CG33003
CG3358
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG7065
E23
Gsc
CG13689
CG42268
per
dyw
HLH3B
CG2652
Dif
CG5043
CG33928
Zasp52
E5
pyr
Ir48b
qvr
E(Pc)
png
MTPAP
CG12773
CG11417
cnc
CG46301
bun
slx1
MED31
CG9775
Spn28B
CG7945
CG33986
CG33985
obst-H
CG43248
CG42729
CG42728
CrebA
CG32816
Pgcl
AdamTS-A
caup
CG12782
CG11357
Tie
CG32243
CG11353
Men
Tsp96F
SppL
Lnk
Su(var)3-3
CG6933
CG17147
CG17145
CG7017
CG6996
Gr23a
CG31690
par-1
mlt
KCNQ
lectin-46Cb
lectin-46Ca
CG34033
CG1648
dila
CG30001
CG16898
Pex3
Pdi
FucTA
CG32147
CG12316
CG31515
Ir94e
Ir94d
CG17380
CG8112
TMEM216
Cks85A
CG11760
ouib
nom
CG8136
Prp31
Msh6
CG7011
CG6878
scny
Txl
Ppat-Dpck
CG10576
siz
skd
Pdss2
CG10584
Sin
CG10581
CG32521
CG1494
ems
Nepl19
Nepl18
Nepl17
Nepl20
dve
CG6280
Cpr50Ca
tx
CG6503
CG34291
Oatp30B
Cpr30B
CG17855
CG13114
CG13113
CG10096
Sccpdh2
Cyp9f2
CG5196
DNAlig3
Cyp9f3
CG10097
mIF2
Ppn
Asator
Ugt303B3
Ugt303B2
Ugt303B1
CG34313
CG32832
CG31743
tweek
CG6115
CG42556
Act57B
Pde8
retn
CG33226
CG30287
CG30286
CG30283
CG3847
CG3842
kdn
ND-B16.6
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
tsh
CG3123
Duox
Cpr23B
CG3119
CG2975
CG34172
CG10874
CG14186
CG14185
sNPF-R
Kank
Lap1
CG12853
ADPS
CG10257
Gug
CG6983
Unr
Mmp2
Uba1
Prat2
CG12009
CG12017
GluProRS
CG31140
AP-1sigma
Jupiter
CG6808
CG14711
CG14710
tws
knk
gammaSnap2
ATPsynepsilonL
stj
CG13192
slim
Ttd14
CG5189
CG30120
Prp19
rswl
CG17669
pk
Spn43Aa
CG12828
nec
Spn43Ad
Spn43Ab
Cys
CG8066
CG31313
stumps
CG7987
CG44094
l(1)G0320
RpS28b
CG32700
CG15317
PDZ-GEF
Loxl1
CG11334
CG11333
Pde11
mbc
Nup98-96
SmD3
Oda
CG34232
Prp8
CG13177
EndoG
CCT5
Sur
Snx17
RpL7
Ripalpha
CG5731
CG5727
CG34159
Fum4
CG43107
CG43103
Gbp2
Gbp1
CG11400
Acp54A1
CG45273
muc
chm
CG15818
CG12521
CG3868
Rala
dsx
rn
CG42544
CG46468
RtcB
Rab9
dgt4
cib
brn
Xpac
Nsun2
CG6379
CG15375
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841