ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX474577 | 5-13h embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◣ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
Pzl
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33804
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
kl-5
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
Sox21a
CG44666
CG43711
CG43710
CG43667
CG43666
CG43709
CG13443
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
soti
CG2016
CG1124
MetRS
Jheh1
CG18190
CG15084
Jheh2
Jheh3
DptB
DptA
CG43071
CG43070
CG43069
CG43109
CG43980
dar1
CG14974
CG10359
CG10357
CkIIalpha-i3
CG13896
CG13895
beat-IV
CG10164
dco
Chchd3
Sox100B
CG12506
Gr21a
CG13947
CG13946
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
CG34165
CG15282
nxf4
CG43290
CG31496
ush
mtSSB
CG6126
CG31287
bor
asun
Mst89B
bcd
Ama
zen
CAH15
otp
EcR
Rx
Ppcs
Cyp12a5
Cyp12a4
CG34268
CG34267
His1:CG33852
His1:CG33807
His1:CG33801
CG44439
CG30369
CG2291
CG14760
CG14759
CG43693
CG7888
Jupiter
CG6808
CG14711
CG14710
Ipk1
Cib2
Gr89a
Decay
Cad89D
CG42342
Sox102F
fd102C
Wnt4
gol
TfAP-2
snu
Sid
CG33346
Imp
sbr
CG15210
CG15209
CG12007
CG3358
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
Ldh
CG10163
Best2
His1:CG33816
His4:CG33869
RapGAP1
Prm
Fhos
CG6576
CG13306
CG43658
mtd
Tim17b1
InR
CG9380
EbpII
Ebp
CG15919
CG15615
Tlk
pdgy
eag
CG9030
Rala
CG34376
CG34288
CG12499
Rpn7
CG17600
S6kII
CG18518
CG4116
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
pkaap
crp
Cyp303a1
CG17329
CG13258
Aps
CG12009
CG12017
DNaseII
CG7785
CG7794
Zasp52
CG33465
RpLP2
CG8311
CG8306
CG8303
CG5089
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
CTCF
pst
Sec63
qm
Srp19
CG14834
CG45770
Tpst
CG46311
CG32633
CG32631
CG11816
CG31191
Atpalpha
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
His4:CG33881
His4:CG33879
His4:CG33877
rdgA
CG43255
CG12661
Tak1
CG42579
Pde8
retn
Dys
CG15025
vtd
unc-5
Hr51
Abd-B
VhaM9.7-d
Actn3
CG33226
CG30287
CG30286
CG30283
Edg91
CG34281
CG14329
CG14327
CG14326
CG14324
CG14323
AttD
CG14325
His1:CG33861
His1:CG33858
His1:CG33855
His1:CG33819
His1:CG33810
CG7956
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
nmo
Pop4
CG8209
nAChRalpha4
Cenp-C
CG31460
5-HT2B
mRpS18A
pch2
Mef2
Mst36Fb
CG43339
CG43338
CG3987
CG6912
CG3984
CG42788
CG17601
nwk
bol
Use1
Dhpr
prc
Muc68E
CG42397
CG43896
CG14125
Npc2b
CG9920
CCHa1
CG10365
nau
CG10232
Reg-2
CG13893
Ir11a
CG46193
His4:CG33899
His4:CG33897
His4:CG33895
His4:CG33893
His4:CG33891
AP-2mu
His4:CG33875
His4:CG33873
His4:CG33871
OdsH
CG33645
CG33644
CG33643
Cyp317a1
Cyp6a20
Cyp6a8
Cyp6a21
CG33642
CG33641
CG33640
sick
CG10481
CG7763
CG34054
CG30026
Drip
CG8112
TMEM216
Cks85A
uex
Cluap1
CG12538
PVRAP
alphaKap4
mtDNA-helicase
RpS2
Bka
shop
htk
SPoCk
l(3)04053
CG7369
CG13124
CG11241
Muc30E
Pp1-Y1
CG41562
Dop1R2
MFS9
Or92a
CG40813
inc
CG14795
CG2233
GEFmeso
br
kl-2
Gr23a
Prosbeta4R2
Prosbeta4R1
Or23a
CG33125
Trf4
Aldh
CG4438
CG17944
CG6168
CG17237
CG42658
robl22E
CG31949
mamo
CG3649
RpL23
CG13531
DIP-beta
CG43125
CG43124
CG12490
CG9826
CG9825
Maf1
CG43438
Or1a
dnc
CG3939
Fcp3C
CG18508
Liprin-gamma
CG11298
Pde11
CG15160
CG46443
hoe1
CARPB
CG1354
Rubicon
CAH3
shot
DJ-1alpha
Neu2
CG7519
CG7202
kirre
N
Su(var)2-HP2
Sec61beta
Had2
CG12863
CG42700
Svil
CG31275
Spn
CG32295
mof
Usp30
CG16721
croc
Ptpmeg2
CG3106
Cam
Fancm
CG8119
CG8117
Pde1c
CG16762
CHES-1-like
CG15478
Nc73EF
Cpr73D
prage
Adar
mRpS33
ema
CG17565
CG14881
Indy
Socs16D
CG12986
wgn
CG31279
stl
blw
CycB
CG42260
CG30271
Shmt
CG3726
CG12236
CG4020
Act5C
Ubr1
CG8945
CG4955
crol
CycY
nej
btd
CG16898
wcy
CG4949
CG43077
Tsp68C
Hml
CG8757
CG8750
CG43184
lace
lectin-46Cb
lectin-46Ca
CG34033
CG1648
siz
RpS28a
Mgat2
CG7920
Axn
nAChRalpha6
Fkbp59
CG4537
CG34183
CG14762
lectin-28C
TwdlE
CG14535
PDZ-GEF
CG15429
Atet
Odc2
Odc1
Sur-8
CREG
slbo
bs
for
GILT3
GILT2
RpS21
CG3117
CG3104
CG2991
CG2983
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
mthl14
E(bx)
Drgx
beat-IIIc
Lasp
Dab
CG9692
CG43954
SNF4Agamma
CG9171
fal
Gbs-76A
cmpy
CG34260
CG14186
CG14185
Wdr62
sNPF-R
SPE
CG13192
Ndae1
CG31909
CG13786
Scp2
CG14903
CG14891
obst-E
eIF3d1
CG18754
CG16710
CG1688
LanB2
Toll-7
rtv
Ran
Lint-1
Dlic
CG32668
Fmr1
CG15201
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
CG46301
Gsc
CG13689
CG3335
CadN
Eip75B
wdp
CG9497
CG31663
CG15358
sced
geminin
Opbp
Dpit47
Adf1
GABA-B-R3
Eaat2
nol
NaPi-III
CG32074
Mtpalpha
Eh
CG14331
CG14330
jp
brwl
zip
uzip
larp
CG12730
ham
CG9410
CG15908
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG5890
CG5886
CG14545
Got1
CysRS
CG30094
stc
CG15269
viaf
Pop2
Grip163
CG6928
RpL37a
Rrp46
Irp-1B
CG6345
CG6325
ind
Rpn12R
CG43678
CG13465
BobA
CG5565
CG5561
CG5556
CG31924
CG13962
Asator
Sod1
CG6118
mRpL2
Ufd1-like
FoxK
Gp150
CG9018
ACXD
Spn28Db
Spn28Da
SmE
CG7102
CG34132
Act88F
stg
SP1029
CG45544
CG31445
NLaz
CG31659
CG14346
ms(3)K81
SPARC
Rb97D
CG5500
CG13280
CG13272
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
Oseg2
abd-A
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
Sr-CII
RpS11
CG8858
Or98b
Moca-cyp
Gfat2
Egm
dila
CG30001
Lk
CG34039
CG12617
Act57B
cpo
Myd88
Cpr100A
CG15546
CG15545
flr
CG10222
tbrd-1
TfIIA-S
Pli
CG42758
Rim
CG43445
bowl
bark
CG31960
mdy
Cse1
Syn2
CG9005
cort
Nse1
Nhe3
Tsp
cm
CG4593
CG42308
CG32736
CG3032
Usp47
DnaJ-1
sim
CG43063
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
ball
Lerp
IntS12
His2Av
AP-2alpha
caps
CG42268
sens
CG11327
CG2841
ftz-f1
Kank
tkv
Bub1
Bsg25D
raskol
Cyp4ac3
Lap1
CG12853
ADPS
Gycbeta100B
CG15556
CG15554
CG14270
CG12206
CG10804
CG10803
CG10802
scrib
Cyp12e1
CG46270
glu
LSm7
ChLD3
BuGZ
HisRS
Ggt-1
CG6470
Bx
Mp
RpS15Aa
Jafrac1
IP3K2
CG15747
CG10257
CG42354
CG42353
phyl
Oaz
Cht6
CG33557
CG2990
GNBP2
GNBP1
Capr
CG42495
Ca-beta
Cpr76Bc
Cpr76Bb
mRpL14
Raf
Ilp6
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
CG6481
ssp6
CG6610
CG13295
fra
CG8818
CG8569
CG33632
CG13293
achi
CG13151
Rbfox1
Cpr76Ba
qvr
E(Pc)
CG42346
dnt
CG13086
Vm32E
CG4788
CG17349
scyl
Oatp30B
Loxl1
CG11334
CG11333
CG32301
Timp
CG43055
Rlip
CG5697
CG17278
Sytalpha
RagA-B
CG11970
Men
CG5568
CG18586
CAHbeta
mthl2
TM9SF3
Eaf6
CG10591
Lmpt
gcm
CG31709
Or67c
Pax
CG13085
Alp12
CheB93b
CheB93a
Ugt49B2
pzg
ppl
CG12974
AcCoAS
Cpr78Cb
Cpr78Ca
CG43332
flz
tzn
Spc105R
Six4
CG3698
lectin-37Db
lectin-37Da
Lectin-galC1
Snp
CG44249
Pex3
Pdi
FucTA
CG32147
CG12316
CG13501
CG13500
TotX
Grik
Pez
Cpr
ome
CG4914
CG43121
CG7907
par-1
CG2199
hdly
Lsd-2
CG9065
CG33178
CG33177
Eglp4
Eglp2
Ref1
Dpck
CG1943
CG15130
Ptp61F
312
Rab3-GEF
CG5599
CG15027
MBD-R2
CG4115
CG10041
CG10038
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
CG44956
CG14082
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
CG10949
Arpc2
fz2
Srpk79D
Csp
CG11523
unk
VhaAC39-2
CG13829
Ufl1
CG1965
CG1105
ncm
RpS26
shep
elav
CG4293
Appl
Rich
Ddx1
CD98hc
Irk1
Sfp84E
Os-C
Gr59d
Eglp3
SIFaR
RpI135
CG13538
Cpr30B
CG17855
CG13114
CG13113
CG13025
sigmar