ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2010897 | Embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◣ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

CG43066
Eh
CG14331
CG14330
Imp
sbr
CG15210
CG15209
Cyp12d1-d
BBS4
CG13229
CARPB
CG1354
Ptpmeg2
CG3106
CG8119
CG8117
Rlip
CG5697
CG17278
Abd-B
CadN
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
Tak1
CG42579
CG42700
Cam
cmpy
CG34260
snu
Sid
CG33346
CG10365
nau
CG10232
Rubicon
CAH3
CG12730
Cpr76Bc
Cpr76Bb
Cpr76Ba
lectin-28C
TwdlE
CG14535
CG1077
Osi1
unc-5
Hr51
Npc2b
CG9920
CCHa1
l(1)sc
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
Spn
CG32295
Dys
CG15025
mRpS33
ema
CG17565
CG14881
CG31279
Shmt
CG3726
CG12236
CG4020
Act5C
larp
Or98b
Moca-cyp
Gfat2
CG15919
CG15615
CG31275
Nc73EF
Cpr73D
CG6118
Act88F
dar1
CG14974
CG10359
CG10357
Ubr1
mof
Usp30
CG16721
prage
Adar
Or67c
GAA1
Tpst
CG46311
CG32633
CG32631
CG11816
wgn
slbo
bs
Ldh
CG10163
Best2
Spn28Db
Spn28Da
SmE
CG7102
CG34132
CG43980
soti
Mef2
VhaM9.7-d
Actn3
Tsp68C
Hml
CG8757
CG8750
CG43184
nxf4
CG43290
CG31496
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
TfAP-2
CG14186
CG14185
sNPF-R
Esyt2
CG3556
raskol
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
Picot
CG34458
CG34457
Socs16D
CG12986
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
CG6398
CG12007
Sox21a
Svil
CG16762
CG8945
CG4955
wcy
CG4949
CG43077
CG42346
Ent3
CG32107
CG10943
sick
CG10481
stl
blw
CycB
CG42260
CG30271
CG16898
shot
DJ-1alpha
CG5568
CG18586
ftz-f1
CG14762
Odc2
Odc1
CG44439
CG30369
CG2291
CG14760
CG14759
ham
Fs
scb
lace
Fmr1
Neu2
CG7519
CG7202
croc
Ipk1
Cib2
dnc
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
DNaseII
CG7785
CG7794
betaTub60D
Wdr62
CG31663
CG15358
CG46301
CG13962
kirre
N
cpo
Rim
CG43445
CG34165
CG15282
Fancm
CG9171
obst-E
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
Indy
Wnt4
CSN3
CG3288
CG13255
CG11456
bcd
Ama
zen
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
CG13465
BobA
Gsc
CG13689
CHES-1-like
CG15478
CG42268
mdlc
CG4390
CG17193
Ca-beta
Vm32E
CG4788
PDZ-GEF
flr
CG10222
sens
nej
btd
CG15429
Atet
Mst36Fb
CG43339
CG43338
dila
CG30001
scrib
Pde8
retn
sm
CG43277
CG42753
CG18367
CG15124
for
Drgx
GABA-B-R3
Eaat2
Cpr100A
CG15546
CG15545
CG12071
CG3358
Ndae1
CG31909
CG13786
CG33128
CG31928
CG31926
CG31661
CG18131
CG42680
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
CG32461
RagA-B
CG11970
CAHbeta
Su(var)2-HP2
Sec61beta
Had2
CG12863
CAH15
otp
Rx
Act57B
CG8180
CG9380
EbpII
Ebp
CG43693
CG7888
RpLP2
CG8311
CG8306
CG8303
CG5089
Timp
CG43332
Scp2
CG14903
CG14891
flz
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
shop
htk
Got1
CysRS
CG30094
CG34435
CG34434
RhoGAP5A
Pop1
Mlc-c
CG14082
fz2
TotX
Grik
hdly
CG12617
dco
Chchd3
Sox100B
chn
Mtpalpha
jp
brwl
gcm
CG31709
Cyp12e1
CG46270
Gr98d
Gr98c
Gr98b
CG13280
CG13272
mdy
Cse1
siz
glu
LSm7
ChLD3
BuGZ
SNF4Agamma
Sr-CII
RpS11
CG8858
Rrp46
Irp-1B
CG6345
CG6325
CG43658
EcR
Cht6
CG33557
CG2990
Cyp308a1
fal
Gbs-76A
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
mthl2
TM9SF3
Eaf6
CG10591
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
RpS21
CG3117
CG3104
CG2991
CG2983
CG5890
CG5886
CG14545
CG18557
CG12502
Dci
dpr20
bowl
bark
CG31960
CG31036
CG15517
CG15515
CG31038
CG12009
CG12017
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
sim
CG43063
timeout
Pde1c
crol
CycY
RpL37a
Prm
Fhos
CG6576
CG13306
viaf
Pop2
Grip163
CG6928
CG13192
phyl
Oaz
fra
CG8818
CG8569
CG33632
achi
CG13151
LanB2
CG3335
wdp
Gp150
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
Lcp65Ag1
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
cort
Nse1
Nhe3
Tsp
CG11327
CG42784
CG43233
CG31683
CG18858
Cdc23
CG2493
Gr89a
Decay
Cad89D
CG42342
CG14459
upd2
ftz
Scr
pkaap
crp
Cyp303a1
CG17329
CG13258
mtSSB
CG6126
CG31287
Kank
Lap1
CG12853
ADPS
CG10257
shd
HGTX
mthl14
E(bx)
HisRS
Ggt-1
CG6470
Bx
CG6481
GNBP2
GNBP1
Capr
CG42495
CD98hc
Sfp84E
Os-C
InR
fuss
toy
Tlk
Rala
par-6
CG8188
chas
CG14383
Paip2
CG7381
CG7091
CG31342
CG7509
CG18808
mRpL13
CG10602
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
ome
CG4914
CG43121
CG3638
CG11403
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
elav
CG4293
Appl
Lk
CG34039
CG42758
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
Lasp
Dab
CG9692
CG43954
Pex3
Pdi
FucTA
CG32147
CG12316
CG15040
scramb1
CG8065
CG32055
cnn
cbs
CG30062
vig
vas
solo
TfIIS
CG33679
ck
Reg-2
CG13893
rols
tapas
MED8
CG8929
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
RapGAP1
spel1
mTTF
l(2)34Fd
l(2)34Fc
Send2
Rab14
Pgant35A
CG43052
RpS28a
Mgat2
CG7920
Axn
east
PIG-K
MBD-R2
CG4115
CG10041
CG10038
CG44956
Poc1
ImpL1
CG14110
CG14107
CG10171
Mes2
dup
SRPK
Pms2
tbrd-1
TfIIA-S
Pli
CG43867
CG3713
CG14635
lab
Edg84A
Ccp84Ag
Ccp84Af
Ccp84Ae
Ccp84Ad
Mipp1
CG43206
CG4229
fz3
CG16989
CG13360
tw
obe
Trissin
CG5213
Rh6
ms(3)K81
SPARC
Rb97D
CG5500
ball
Lerp
IntS12
His2Av
Srpk79D
Csp
CG11523
Rich
Ddx1
RunxA
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
CG9497
stc
CG15269
CG9498
ppk7
ppk14
CG9500
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
Egm
CG9005
Zasp66
Cdc6
GAPsec
S-Lap2
CG14270
CG12206
CG10804
CG10803
CG10802
Osi7
Osi9
Osi8
Osi10a
cm
CG4593
CG42308
CG32736
CG3032
Pax
CG13085
Alp12
lectin-37Db
lectin-37Da
Lectin-galC1
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
CG43153
CG14930
Dlg5
CG4970
CG14929
dnt
CG13086
CG17349
gol
Eip75B
dan
lobo
CG13654
CG13653
RpS15Aa
Jafrac1
IP3K2
CG15747
CG9988
CG14062
CG10011
CkIIalpha-i3
CG13896
CG13895
pzg
ppl
CG12974
AcCoAS
Cpr78Cb
Cpr78Ca
ssp6
CG6610
CG13295
CG13293
CG9777
mthl1
SNRPG
RpS19a
Rok
azot
CG30378
rnh1
drosha
PIG-X
CG8728
CG34431
CG34430
CG30380
CG30379
slim
Ttd14
CG5189
CG30120
Prp19
rswl
CG17669
CG10324
CCT3
CG14907
CG14906
modSP
CG31191
Atpalpha
RhoGAP100F
Rift
FeCH
CG42233
CG1971
tkv
Bub1
Bsg25D
Cyp4ac3
vri
Myd88
Asator
Pez
Cpr
NtR
GM130
CG34205
a
gom
CG11269
CG34268
CG34267
pdgy
eag
CG9030
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
Pglym87
TyrRII
CG14321
Lgr1
Atg8b
Mbs
Diap1
fl(2)d
CG6329
CG13339
CG6347
CG6337
CG15130
CG10949
Arpc2
CG10947
sigmar
l(2)dtl
CG5504
Alg3
Sesn
CG46429
CG18128
dlt
alpha-Spec
Patj
JTBR
Cdc37
CG42676
CG12020
Snp
CG44249
CG13501
CG13500
Ref1
Dpck
CG1943
Ufl1
CG1965
CG1105
dnd
CG6678
CG43844
fit
CG31465
CG17819
Gr59d
CG13538
RpL37b
Gr59c
CG42703
CG9876
ncm
RpS26
ush
mtd
Tim17b1
stg
SP1029
CG45544
CG31445
Usp47
DnaJ-1
zfh1
Zasp52
CG33465
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
GCS2alpha
CG7956
galla-2
OXA1L
CG6418
CG6409
Blos4
CG9593
alpha-Man-IIb
nsl1
smash
eIF3f1
Hers
amn
velo
Ist1
CG8549
dikar
Rsph3
CG17032
elgi
Pka-C3
GXIVsPLA2
bbx
waw
Sep1
su(w[a])
TfIIA-S-2
CG14631
CG5819
Cndp2
scaf
vlc
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG7065
CG2841
mRpL14
Raf
Ilp6
CG13323
CG13324
gcm2
Trx-2
GlcAT-S
Oatp30B
Cpr30B
CG17855
CG13114
CG13113
GlyP
CG4259
mIF2