ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX287744 | 14-16h embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◣ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

CG12502
Dci
dpr20
CARPB
CG1354
wgn
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
CG9018
ACXD
Oseg2
CG32301
Tpst
CG46311
CG32633
CG32631
CG11816
unc-5
Hr51
Shmt
CG3726
CG12236
CG4020
Act5C
Rubicon
CAH3
raskol
kirre
N
Imp
sbr
CG15210
CG15209
Socs16D
CG12986
CG6398
Ptpmeg2
CG3106
prage
Adar
Toll-7
shot
DJ-1alpha
Pde1c
crol
CycY
Tak1
CG42579
mof
Usp30
CG16721
GAA1
Su(var)2-HP2
Sec61beta
Had2
CG12863
dnc
snu
Sid
CG33346
Tsp68C
Hml
CG8757
CG8750
CG43184
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
TfAP-2
CG31275
Oatp30B
Cpr30B
CG17855
CG13114
CG13113
Scp2
CG14903
CG14891
Ldh
CG10163
Best2
stl
blw
CycB
CG42260
CG30271
RSG7
CG13003
CHES-1-like
CG15478
Lasp
Dab
CG9692
CG43954
stc
CG15269
Neu2
CG7519
CG7202
croc
ncm
RpS26
Gsc
CG13689
CG8119
CG8117
bcd
Ama
zen
CG13280
CG13272
mdy
Cse1
dco
Chchd3
Sox100B
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
siz
ftz-f1
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
Pde8
retn
LanB2
CG3335
CG14270
CG12206
CG10804
CG10803
CG10802
Nc73EF
Cpr73D
RagA-B
CG11970
CAHbeta
Mef2
Spn
CG32295
CG3358
Cht6
CG33557
CG2990
Fmr1
mRpL55
cdi
CG6040
ATPsynD
CG43980
Spn28Db
Spn28Da
SmE
CG7102
CG34132
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
Abd-B
CG43332
Dys
CG15025
Esyt2
tkv
Bub1
Bsg25D
Cyp4ac3
vri
cmpy
CG34260
CG12007
Gr89a
Decay
Cad89D
CG42342
RpLP2
CG8311
CG8306
CG8303
CG5089
dar1
CG14974
CG10359
CG10357
DNaseII
CG7785
CG7794
SP1173
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
flr
CG10222
sens
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
HisRS
Ggt-1
CG6470
Bx
CG6481
CG44439
CG30369
CG2291
CG14760
CG14759
PDZ-GEF
CG5890
CG5886
CG14545
ms(3)K81
SPARC
Rb97D
CG5500
ball
Lerp
IntS12
His2Av
Fancm
CG15919
CG15615
HnRNP-K
shop
htk
InR
l(1)G0320
RpS28b
CG32700
CG15317
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
RpS28a
Mgat2
CG7920
Axn
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
RpS21
CG3117
CG3104
CG2991
CG2983
CG18557
CG42327
CG14715
mRpS33
ema
CG17565
CG14881
CG31279
lectin-46Cb
lectin-46Ca
CG34033
CG1648
dila
CG30001
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
Act57B
CG31145
Wdr62
CG31663
CG15358
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG7065
Npc2b
CG9920
CCHa1
PK1-R
CG12402
qvr
E(Pc)
nxf4
CG43290
CG31496
stg
SP1029
CG45544
CG31445
Ipk1
Cib2
Ndae1
CG31909
CG13786
soti
piwi
TTLL4A
CG12253
SCAR
ATPsynG
CG8945
CG4955
CG4991
CG16700
ham
pkaap
crp
Cyp303a1
CG17329
CG13258
Sox21a
Sr-CII
RpS11
CG8858
pzg
ppl
CG12974
AcCoAS
Cpr78Cb
Cpr78Ca
Rrp46
Irp-1B
CG6345
CG6325
glu
LSm7
ChLD3
BuGZ
Wnt4
Jupiter
CG6808
CG14711
CG14710
lectin-28C
TwdlE
CG14535
CG33226
CG30287
CG30286
CG30283
CG13192
Cpr100A
CG15546
CG15545
caps
CG12071
CG6184
CG6195
CG31220
CG31219
subdued
Vha13
Nup58
CG42700
Cam
CG31191
Atpalpha
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
Mp
RpL37a
CG10365
nau
CG10232
PGRP-LC
PGRP-LA
Lmpt
CG32170
Mtpalpha
jp
brwl
Cyp12e1
CG46270
CG46468
obe
Trissin
CG5213
Rh6
Eh
CG14331
CG14330
fiz
Eo
CG14406
CG12398
Flo2
CG9503
CG32591
nej
btd
CG16898
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
Lcp65Ag1
RapGAP1
cort
Nse1
Nhe3
Tsp
CG11327
Got1
CysRS
CG30094
east
PIG-K
Loxl1
CG11334
CG11333
slbo
bs
Mst36Fb
CG43339
CG43338
CG42346
GNBP2
GNBP1
Capr
CG42495
CG3556
Kank
Lap1
CG12853
ADPS
CG10257
Myd88
Prp31
Msh6
CG7011
CG6878
TotX
Grik
hdly
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
SIFaR
pan
CkIIalpha-i3
CG13896
CG13895
gcm
CG31709
alpha-Man-Ia
Gip
CG43740
CG2909
CG15306
Syn2
Cpr76Bc
Cpr76Bb
Cpr76Ba
Glut3
viaf
Pop2
Grip163
CG6928
Timp
Gr59d
CG13538
RpL37b
Gr59c
CG42703
CG9876
Lst
Cdk4
Sytalpha
Oli
CG6870
Pex3
Pdi
FucTA
CG32147
CG12316
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
wcy
CG4949
CG43077
vnc
dpr6
Dronc
CG6685
CG6674
CG42455
CAH15
otp
Rx
CG8180
sick
CG13962
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
mud
mRNA-cap
Fbxl4
CG32599
CG1434
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
bor
asun
Mst89B
zip
uzip
Ca-beta
Vm32E
CG4788
CG14186
CG14185
sNPF-R
mthl14
E(bx)
SNF4Agamma
Asator
elav
CG4293
Appl
CG14762
Odc2
Odc1
CG43055
Gycbeta100B
CG15556
CG15554
Ref1
Dpck
CG1943
Ufl1
CG1965
CG1105
CG9380
EbpII
Ebp
Ten-a
Usp7
Cyp318a1
Cyp311a1
Pax
CG13085
Alp12
lectin-37Db
lectin-37Da
Lectin-galC1
CG42784
GABA-B-R3
Eaat2
ome
CG4914
CG43121
CD98hc
Sfp84E
Os-C
Snp
CG44249
CG13501
CG13500
flz
cpo
Rim
CG43445
Egm
CG9005
CG13465
BobA
CG17032
elgi
Pka-C3
GXIVsPLA2
out
gol
Mipp1
CG43206
CG4229
VhaM9.7-d
Actn3
CG34165
CG15282
mtSSB
CG6126
CG31287
dlt
alpha-Spec
Patj
JTBR
Cdc37
CG42676
CG12020
Eip75B
fal
Gbs-76A
CG1688
Or67d
can
fra
CG8818
CG8569
CG33632
achi
CG13151
ninaA
dbe
aru
PNUTS
CG15040
Smyd5
Oga
Nelf-A
CG5862
CG3337
Rbfox1
Gmap
CG6340
CG13025
Nrt
CG9705
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
GCS2alpha
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
CG1077
Osi1
Pcf11
Cyp6a23
Cyp6a22
Cyp6a19
Cyp6a17
Cyp6a9
Srpk79D
Csp
CG11523
Rich
Ddx1
Men
tbrd-1
TfIIA-S
Pli
tapas
MED8
CG8929
sm
CG43277
CG42753
CG18367
CG15124
CG43867
CG3713
CG14635
CG9497
CG9498
ppk7
ppk14
CG9500
sim
CG43063
CG12782
timeout
CG43693
CG7888
CG15130
CG10949
Arpc2
CG10947
MBD-R2
CG4115
CG10041
CG10038
CG44956
velo
Ist1
CG8549
dikar
Rsph3
Hacd1
Rh5
Nfs1
CG18787
Qtzl
CG18789
Ada1-1
GlyP
CG4259
CG9593
alpha-Man-IIb
nsl1
beat-IIIc
Hk
cnn
cbs
CG30062
gcm2
Trx-2
GlcAT-S
Gr58c
Gr58b
CG9304
CG34029
Gr58a
ppk9
pdgy
eag
CG9030
Gug
CG6983
Unr
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
CG15429
Atet
Dll
CG42851
Yip1d1
Vha68-1
Tor
ND-15
CG4822
CG13694
Gs1
CG3164
Svil
CG16762
dnt
CG13086
CG17349
CG2841
mRpL14
Raf
Ilp6
CG31698
CG15404
shep
RpI135
CG4213
Usp47
DnaJ-1
EcR
AP-2alpha
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
CG7956
par-1
fz2
azot
CG30378
rnh1
drosha
PIG-X
CG8728
CG34431
CG34430
CG30380
CG30379
RtcB
Rab9
CG3781
Spx
Rbcn-3A
Sfp26Ad
Gpdh1
CG9044
Vm26Ac
Vm26Ab
CG13999
CG13998
nerfin-2
CG33784
Alp13
CG33783
CG6163
Lk
CG34039
CG42758
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
bowl
bark
CG31960
psq
slim
Ttd14
CG5189
CG30120
Prp19
rswl
CG17669
larp
Or98b
Moca-cyp
Gfat2
CG12009
CG12017
retm
frj
Rchy1
CG9527
mdlc
CG4390
CG17193
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
insv
Elba2
ND-B17.2
Arpc5
Drp1
CG15394
CG15373
CG43658
fax
TMS1
GluRS-m
TyrRS
CG33158
Pdp1
pont
Sirt6
Nuak1
ex
abd-A
Chs2
CG7458
acj6
CG9164
pk
CG33140
CG30385
CG30384
CG9171
obst-E
Fs
scb
CadN
CG3638
CG11403
CG34268
CG34267
CASK
Gr93a
CG12617
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
Obp99d
Dup99B
goe
Twdlalpha
TwdlZ
CG32568
Rlip
CG5697
CG17278
shd
Nepl16
CG34027
HGTX
CG45095
TTLL5
CG31510
Cda5
galectin
dbr
CG11374
Prm
Fhos
CG6576
CG13306
for
Drgx
wts
dj-1beta
cindr
CG11873
mtd
Tim17b1
axo
RhoGEF64C
CG7514
CG18418