ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX749041 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◣ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
mtSSB
CG6126
CG31287
dco
Chchd3
Sox100B
soti
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
CkIIalpha-i3
CG13896
CG13895
Jupiter
CG6808
CG14711
CG14710
Sox21a
gol
ush
CG15919
CG15615
Mef2
CG43980
shop
htk
RapGAP1
unc-5
Hr51
His1:CG33813
His1:CG31617
His1:CG33864
His1:CG33849
His1:CG33846
His1:CG33843
His1:CG33840
His1:CG33837
His1:CG33804
Pzl
CG34165
CG15282
Imp
sbr
CG15210
CG15209
CG43693
CG7888
CG7956
bor
asun
Mst89B
TfAP-2
CG34268
CG34267
snu
Sid
CG33346
Tpst
CG46311
CG32633
CG32631
CG11816
EcR
CG8119
CG8117
Gr89a
Decay
Cad89D
CG42342
Tak1
CG42579
Ipk1
Cib2
mRpS18B
Kua
CG13970
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
His2A:CG33829
His2A:CG33826
His2A:CG33823
His2A:CG33820
His2A:CG33817
His2A:CG33814
His2A:CG31618
flr
CG10222
sens
InR
CG13280
CG13272
mdy
Cse1
RpLP2
CG8311
CG8306
CG8303
CG5089
Npc2b
CG9920
CCHa1
nej
btd
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
dar1
CG14974
CG10359
CG10357
Socs16D
CG12986
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
pdgy
eag
CG9030
CG44439
CG30369
CG2291
CG14760
CG14759
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
Wnt4
Cht6
CG33557
CG2990
CARPB
CG1354
wgn
CG31191
Atpalpha
CG12007
Edg91
CG34281
CG14329
CG14327
CG14326
CG14324
CG14323
AttD
CG14325
phyl
Oaz
Mst36Fb
CG43339
CG43338
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
mtd
Tim17b1
nxf4
CG43290
CG31496
CG12009
CG12017
Ldh
CG10163
Best2
Prm
Fhos
CG6576
CG13306
Cda5
galectin
dbr
CG11374
CG3358
Eip75B
CG2016
CG1124
Su(var)2-HP2
Sec61beta
Had2
CG12863
PDZ-GEF
CG10365
nau
CG10232
bowl
bark
CG31960
Ndae1
CG31909
CG13786
bcd
Ama
zen
kl-5
Reg-2
CG13893
Ptpmeg2
CG3106
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
CadN
CG9171
obst-E
Rrp46
Irp-1B
CG6345
CG6325
pkaap
crp
Cyp303a1
CG17329
CG13258
stg
SP1029
CG45544
CG31445
Sytalpha
Oli
CG6870
CG31275
CG33226
CG30287
CG30286
CG30283
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
Mes2
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
Pde8
retn
sim
CG43063
DNaseII
CG7785
CG7794
for
Drgx
CAH15
otp
Rx
RagA-B
CG11970
CAHbeta
Zasp52
CG33465
PGRP-LC
PGRP-LA
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
Mtpalpha
jp
brwl
gcm
CG31709
Syn2
Fmr1
CG42354
CG42353
out
sick
CG10481
CG32461
piwi
TTLL4A
CG12253
SCAR
ATPsynG
Gsc
CG13689
Men
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
CG31036
CG15517
CG15515
CG31038
Cyp12d1-d
BBS4
CG13229
CG43332
shot
DJ-1alpha
ham
Abd-B
retm
frj
Rchy1
CG9527
CG9896
Sr-CII
RpS11
CG8858
CG31324
CG6142
CG46301
cnn
cbs
CG30062
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
Obp99d
Dup99B
Fancm
Nc73EF
Cpr73D
Ubr1
CHES-1-like
CG15478
Dys
CG15025
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
CG14762
lectin-28C
TwdlE
CG14535
Odc2
Odc1
CG9380
EbpII
Ebp
CG6118
Act88F
HisRS
Ggt-1
CG6470
Bx
CG6481
TotX
Grik
ome
CG4914
CG43121
hdly
mof
Usp30
CG16721
Indy
CG16898
CD98hc
Sfp84E
Os-C
GABA-B-R3
Eaat2
Svil
CG16762
lace
CG14186
CG14185
sNPF-R
Cyp12e1
CG46270
CG2199
Ptp61F
312
CG7763
CG34054
CG30026
Smyd4-3
VhaM9.7-d
Actn3
fal
Gbs-76A
GNBP2
GNBP1
Capr
CG42495
His3:CG33830
His3:CG33827
His3:CG33824
His3:CG33821
His3:CG33818
His3:CG33866
His3:CG33863
His3:CG33860
His3:CG33857
His3:CG33854
His3:CG33851
His3:CG33848
His3:CG33845
His3:CG33842
His3:CG33839
His3:CG33836
His3:CG33833
His3:CG33815
His3:CG33812
His3:CG33809
His3:CG33806
His3:CG33803
His3:CG31613
Rubicon
CAH3
tbrd-1
TfIIA-S
Pli
mRpS33
ema
CG17565
CG14881
CG31279
RpS28a
Mgat2
CG7920
Axn
slbo
bs
CG9497
Spn28Db
Spn28Da
SmE
CG7102
CG34132
raskol
CG9498
ppk7
ppk14
CG9500
siz
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
Cpr100A
CG15546
CG15545
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
CG1077
Osi1
Picot
CG34458
CG34457
fax
TMS1
GluRS-m
TyrRS
CG33158
mamo
ben
Ste12DOR
upd2
muc
CG5958
CG42700
Cam
mthl2
TM9SF3
Eaf6
CG10591
Spn
CG32295
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
ncm
RpS26
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
Scp2
CG14903
CG14891
wdp
Gp150
obe
Trissin
CG5213
nerfin-2
CG33784
Alp13
Neu2
CG7519
CG7202
croc
SNF4Agamma
Pex3
Pdi
FucTA
CG32147
CG12316
Lk
CG34039
CG42758
stl
blw
CycB
CG42260
CG30271
Tsp68C
Hml
CG8757
CG8750
CG43184
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
LanB2
CG3335
cort
Nse1
Nhe3
Tsp
Usp47
DnaJ-1
CG11327
flz
CG7509
CG18808
RunxA
CG42784
Cyp308a1
CG13962
fra
CG8818
CG8569
CG33632
achi
CG13151
sm
CG43277
CG42753
CG18367
HnRNP-K
CG15124
Pde1c
crol
CycY
zip
uzip
Egm
CG9005
CG9220
Alp11
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
Pdp1
CG43233
CG31683
CG18858
Cdc23
CG2493
Shmt
CG3726
CG12236
CG4020
Act5C
CG13192
abd-A
Gr98d
Gr98c
Gr98b
CG42673
mthl14
E(bx)
Lasp
Dab
CG9692
CG43954
Prp31
Msh6
CG7011
CG6878
CG34253
CG44004
Gpa2
CG12730
Eh
CG14331
CG14330
Myd88
sigmar
l(2)dtl
CG5504
Alg3
Sesn
CG46429
CG18128
CG42327
CG14715
dup
SRPK
Pms2
cmpy
CG34260
Wdr62
CG31663
CG15358
CG12617
unk
VhaAC39-2
CG13829
Irk1
Prat2
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
Pex7
CG13305
Arr2
Tbce
SCAP
CG14591
CG34211
CG5568
CG18586
viaf
Pop2
Grip163
CG6928
ftz-f1
CG9988
CG14062
CG10011
CG8945
CG4955
wcy
CG4949
CG43077
Lst
Cdk4
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
Ten-a
Usp7
Cyp318a1
Cyp311a1
CG15429
Atet
cpo
Rim
CG43445
CG42268
cher
CG1902
CG30339
GstT2
GstT1
CG12926
Got1
CysRS
CG30094
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
CG42346
pzg
ppl
CG12974
AcCoAS
Cpr78Cb
Cpr78Ca
Smyd5
Oga
Nelf-A
CG5862
CG3337
bbx
waw
Sep1
sol
peng
dila
CG30001
Lmpt
Poc1
ImpL1
CG14110
CG14107
CG10171
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
CG15040
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
RpS21
CG3117
CG3104
CG2991
CG2983
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
Cpr76Bc
Cpr76Bb
Cpr76Ba
qvr
E(Pc)
alphaSnap
Spn77Ba
Spn77Bb
prage
Adar
Rlip
CG5697
CG17278
tapas
MED8
CG8929
betaTub60D
pk
CG33140
CG30385
CG30384
kirre
N
stc
CG15269
Asator
fz2
mdlc
CG4390
CG17193
Chs2
CG7458
alpha-Man-Ia
Gip
CG43740
CG2909
CG15306
SiaT
nol
NaPi-III
CG32074
larp
Sod1
mRpL2
Ufd1-like
FoxK
Or98b
Moca-cyp
Gfat2
Loxl1
CG11334
CG11333
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
CG6184
CG6195
CG31220
CG31219
subdued
Vha13
Nup58
eya
lab
Edg84A
Ccp84Ag
Ccp84Af
Ccp84Ae
Ccp84Ad
CG15130
CG10949
Arpc2
CG10947
CG5890
CG5886
CG14545
AP-2alpha
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
Ref1
Dpck
CG1943
Ufl1
CG1965
CG1105
velo
Ist1
CG8549
dikar
CG34435
CG34434
ex
RhoGAP5A
Pop1
Mlc-c
azot
CG30378
rnh1
drosha
PIG-X
CG8728
CG34431
CG34430
CG30380
CG30379
Act57B
cm
CG4593
CG42308
CG32736
CG3032
Ca-beta
Vm32E
CG4788
tzn
Spc105R
Six4
CG3698
Fs
scb
dnt
CG13086
CG17349
galla-2
OXA1L
CG6418
CG6409
Blos4
fl(2)d
CG6329
CG13339
CG6347
CG6337
dnc
glu
LSm7
ChLD3
BuGZ
hwt
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
GCS2alpha
CTCF
pst
Sec63
qm
Srp19
CG14834
CG33927
CG44666
CG43711
CG43710
CG43667
CG43666
CG43709
CG13443
slim