ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11499367 | 0-14h embryos
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◣ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

CG12730
kirre
N
mof
Usp30
CG16721
GAA1
unc-5
Hr51
Rubicon
CAH3
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
Tpst
CG46311
CG32633
CG32631
CG11816
CG9220
Alp11
gol
wgn
CG34435
CG34434
RhoGAP5A
Pop1
Mlc-c
CARPB
CG1354
CHES-1-like
CG15478
CG9380
EbpII
Ebp
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
Tak1
CG42579
shop
htk
siz
RpL37a
nej
btd
dnc
Dys
CG15025
sick
CG10481
pan
shot
DJ-1alpha
Spn
CG32295
CG8119
CG8117
Socs16D
CG12986
CG6398
snu
Sid
CG33346
mRpS33
ema
CG17565
CG14881
CG31279
lace
stl
blw
CycB
CG42260
CG30271
pkaap
crp
Cyp303a1
CG17329
CG13258
mud
mRNA-cap
Fbxl4
CG32599
CG1434
CG15040
Pde8
retn
slbo
bs
fal
Gbs-76A
TotX
Grik
hdly
CG43066
CG43867
CG3713
CG14635
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
Ptpmeg2
CG3106
Svil
CG16762
Sytalpha
Oli
CG6870
prage
Adar
Pcf11
Cyp6a23
Cyp6a22
Cyp6a19
Cyp6a17
Cyp6a9
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
CG3603
CG17959
CG14423
CG14422
CG14421
CG14420
Ref1
Dpck
CG1943
Ufl1
CG1965
CG1105
RpS21
CG3117
CG3104
CG2991
CG2983
flr
CG10222
sens
CG18557
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
wdp
Gp150
CG42700
Cam
Su(var)2-HP2
Sec61beta
Had2
CG12863
Wdr62
CG31663
CG15358
InR
Imp
sbr
CG15210
CG15209
CG44439
CG30369
CG2291
CG14760
CG14759
Shmt
CG3726
CG12236
CG4020
Act5C
CG2841
mRpL14
Raf
Ilp6
sm
CG43277
CG42753
CG18367
Ten-a
CG15124
Usp7
Cyp318a1
Cyp311a1
CG6118
Act88F
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
Asator
CG5568
CG18586
Abd-B
VhaM9.7-d
Actn3
Syn2
CG31191
Atpalpha
CG10365
nau
CG10232
CG8945
CG4955
wcy
CG4949
CG43077
CG14270
CG12206
CG10804
CG10803
CG10802
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
Lcp65Ag1
cpo
Rim
CG43445
CG15919
CG15615
RpS28a
Mgat2
CG7920
Axn
for
Drgx
Lasp
Dab
CG9692
CG43954
CG16898
CheB93b
CheB93a
Ugt49B2
CG7907
Ent3
CG32107
CG10943
Timp
Indy
RapGAP1
Tsp68C
Hml
CG8757
CG8750
CG43184
mRpL55
cdi
CG6040
ATPsynD
CG8300
CG4617
CG4615
fz4
Ipk1
Cib2
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
Ldh
CG10163
Best2
CAH15
otp
Rx
Cht6
CG33557
CG2990
CG43658
CG2199
Ptp61F
312
CG9593
alpha-Man-IIb
nsl1
CG17032
elgi
Pka-C3
GXIVsPLA2
mthl14
E(bx)
CG14186
CG14185
sNPF-R
Fmr1
TfAP-2
NtR
GM130
CG34205
a
gom
CG11269
zfh1
dco
Chchd3
Sox100B
CG43693
CG7888
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
Kank
Lap1
CG12853
ADPS
CG10257
ver
nst
eIF2beta
Tsf2
Pmm2
Gcn5
CG34242
CG4069
GABA-B-R3
Eaat2
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
CG42821
PDZ-GEF
CG7956
Toll-7
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
CG14762
Odc2
Odc1
zip
uzip
CG31275
CG42784
Nc73EF
Cpr73D
Sox21a
CG33226
CG30287
CG30286
CG30283
Fancm
axo
RhoGEF64C
CG7514
CG18418
CG15876
CG13713
dlt
alpha-Spec
Patj
JTBR
Cdc37
CG42676
CG12020
Usp47
DnaJ-1
LanB2
CG3335
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
CG13192
CG32264
CG12009
CG12017
Lmpt
CG32170
Gug
CG6983
Unr
CG15429
Atet
bcd
Ama
zen
CG12007
Wnt4
CG42346
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
CG9018
ACXD
Oseg2
CG32301
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
CG31145
CkIIalpha-i3
CG13896
CG13895
CG12502
Dci
dpr20
glu
LSm7
ChLD3
BuGZ
unk
VhaAC39-2
CG13829
Irk1
ham
Dll
CG42851
sigmar
l(2)dtl
CG5504
Alg3
Sesn
CG46429
CG18128
Men
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
raskol
RSG7
CG13003
par-6
CG8188
chas
Rrp46
Irp-1B
CG6345
CG6325
tkv
Bub1
Bsg25D
Cyp4ac3
vri
Mipp1
CG43206
CG4229
Act57B
CG5819
CG3358
HnRNP-K
Pde1c
crol
CycY
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
Cpr76Bc
Cpr76Bb
Cpr76Ba
piwi
TTLL4A
CG12253
SCAR
ATPsynG
Mef2
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
caps
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
RagA-B
CG11970
CAHbeta
sim
CG43063
timeout
mtSSB
CG6126
CG31287
Cyp12e1
CG46270
Mes2
ms(3)K81
SPARC
Rb97D
CG5500
ball
Lerp
IntS12
His2Av
Ndae1
CG31909
CG13786
eya
phyl
Oaz
Snp
CG44249
CG13501
CG13500
CG43980
Ubr1
Myd88
elav
CG4293
Appl
soti
Or67c
Gr89a
Decay
Cad89D
CG42342
CG11357
Tie
CG32243
CG11353
Scp2
CG14903
CG14891
CG43332
CG5890
CG5886
CG14545
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
mRpS18B
Kua
CG13970
CG34165
CG15282
Eh
CG14331
CG14330
pzg
ppl
CG12974
AcCoAS
Cpr78Cb
Cpr78Ca
Gsc
CG13689
nxf4
CG43290
CG31496
SIFaR
RpLP2
CG8311
CG8306
CG8303
CG5089
PGRP-LC
PGRP-LA
Neu2
CG7519
CG7202
croc
CG9171
obst-E
Npc2b
CG9920
CCHa1
Pex3
Pdi
FucTA
CG32147
CG12316
CG31036
CG15517
CG15515
CG31038
Capa
psq
ncm
RpS26
CG2016
CG1124
cmpy
CG34260
SNF4Agamma
CG42327
CG14715
Esyt2
Oatp30B
Cpr30B
CG17855
CG13114
CG13113
scyl
kug
Tom20
Gabat
CG7668
EcR
stg
SP1029
CG45544
CG31445
slim
Ttd14
CG5189
CG30120
Prp19
rswl
CG17669
SP1173
Egm
CG9005
TyrRII
CG14321
Lgr1
Atg8b
Prm
Fhos
CG6576
CG13306
fra
CG8818
CG8569
CG33632
achi
CG13151
CG7509
CG18808
dar1
CG14974
CG10359
CG10357
cort
Nse1
Nhe3
Tsp
CG11327
RpS15Aa
Jafrac1
IP3K2
CG15747
CG3638
CG11403
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
DNaseII
CG7785
CG7794
CG33128
CG31928
CG31926
CG31661
CG18131
Lk
CG34039
CG42758
CG42268
upd2
Jupiter
CG6808
CG14711
CG14710
ome
CG4914
CG43121
ninaA
dbe
aru
PNUTS
bor
asun
Mst89B
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
CG3246
Cpr100A
CG15546
CG15545
CG12071
AP-2alpha
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
RpI135
obe
Trissin
CG5213
Rh6
RunxA
tbrd-1
TfIIA-S
Pli
pdgy
eag
CG9030
qvr
E(Pc)
Loxl1
CG11334
CG11333
Fs
scb
flz
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
Pglym87
Glut3
CD98hc
Sfp84E
Os-C
CG11873
Ugt303B3
Ugt303B2
Ugt303B1
CG10175
abd-A
retm
frj
Rchy1
CG9527
mthl2
TM9SF3
Eaf6
CG10591
fh
Zpr1
Ost48
His3.3B
Dlip1
CG9034
CG44532
Bap111
CG7065
tzn
Spc105R
Six4
CG3698
Ir67c
Ir67b
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
Got1
CysRS
CG30094
Poc1
ImpL1
CG14110
CG14107
CG10171
CG31698
CG15404
lectin-28C
TwdlE
CG14535
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
CG12617
ush
cnn
cbs
CG30062
Reg-2
CG13893
Edg91
CG34281
CG14329
CG14327
CG14326
CG14324
CG14323
AttD
CG14325
sls
Gr59d
CG13538
RpL37b
Gr59c
CG42703
CG9876
Ca-beta
Vm32E
CG4788
CG9777
mthl1
SNRPG
RpS19a
Rok
CG15414
CG34268
CG34267
CG33502
CG32857
CG32820
CG32819
CG32500
CG17450
GCS2alpha
CG46301
Rgk3
ASPP
cm
CG4593
CG42308
CG32736
CG3032
fz2
ovo
Rpn13
Cp1
CG42806
PheRS-m
St4
CG18568
AGO1
Mtpalpha
jp
brwl
CG46468
CG4991
CG16700
CG43055
Hacd1
Rh5
Nfs1
CG18787
Qtzl
CG18789
Ada1-1
beat-IIIc
GNBP2
GNBP1
Capr
CG42495
CG6903
CG4041
CG32772
CG13962
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
Gr58c
Gr58b
CG9304
CG34029
Gr58a
ppk9
Eip75B
CG42749
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
Pex7
CG13305
Arr2
shep
Spn28Db
Spn28Da
SmE
CG7102
CG34132
Tlk
viaf
Pop2
Grip163
CG6928
CG9497
Pez
Cpr
dnt
CG13086
CG17349
mIF2
Ppn
stc
CG15269
Mst36Fb
CG43339
CG43338
Pdp1
TwdlC
RYa-R
CG31076
CG31075
CG14253