ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1021223 | Kc167
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◢ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◣ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

dco
Chchd3
Sox100B
Tpst
CG46311
CG32633
CG32631
CG11816
soti
Mef2
Ipk1
Cib2
Sox21a
RapGAP1
CG43693
CG7888
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
CARPB
CG1354
Imp
sbr
CG15210
CG15209
CG43980
bcd
Ama
zen
CkIIalpha-i3
CG13896
CG13895
Tak1
CG42579
mtSSB
CG6126
CG31287
ush
dar1
CG14974
CG10359
CG10357
shop
htk
unc-5
Hr51
nej
btd
snu
Sid
CG33346
CG8119
CG8117
CG15919
CG15615
Wnt4
CG3358
Jupiter
CG6808
CG14711
CG14710
RpLP2
CG8311
CG8306
CG8303
CG5089
Fmr1
CG34165
CG15282
sick
CG10481
InR
Prm
Fhos
CG6576
CG13306
CG12007
wgn
CG34268
CG34267
phyl
Oaz
EcR
Reg-2
CG13893
Su(var)2-HP2
Sec61beta
Had2
CG12863
bor
asun
Mst89B
CG7956
CG13280
CG13272
mdy
Cse1
Ptpmeg2
CG3106
gol
HisRS
Ggt-1
CG6470
Bx
CG6481
Mst36Fb
CG43339
CG43338
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
Socs16D
CG12986
TfAP-2
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
Eip75B
Ldh
CG10163
Best2
CAH15
otp
Rx
Pde8
retn
CG44439
CG30369
CG2291
CG14760
CG14759
mRpS18B
Kua
CG13970
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
CadN
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
Gr89a
Decay
Cad89D
CG42342
nxf4
CG43290
CG31496
Spn
CG32295
CG2016
CG1124
CG31191
Atpalpha
lace
CG16898
Gsc
CG13689
Npc2b
CG9920
CCHa1
CG33226
CG30287
CG30286
CG30283
Syn2
CG46301
CG31275
Cda5
galectin
dbr
CG11374
RpS28a
Mgat2
CG7920
Axn
Rubicon
CAH3
GABA-B-R3
Eaat2
shot
DJ-1alpha
Svil
CG16762
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
ham
kirre
N
mRpS33
ema
CG17565
CG14881
CG31279
upd2
pkaap
crp
Cyp303a1
CG17329
CG13258
Tsp68C
Hml
CG8757
CG8750
CG43184
Fancm
Abd-B
VhaM9.7-d
Actn3
CG10365
nau
CG10232
CG42354
CG42353
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
bowl
bark
CG31960
pdgy
eag
CG9030
mof
Usp30
CG16721
Pde1c
crol
CycY
Indy
flr
CG10222
sens
CG5568
CG18586
Ndae1
CG31909
CG13786
PDZ-GEF
Ubr1
CG8945
CG4955
wcy
CG4949
CG43077
velo
Ist1
CG8549
dikar
Rrp46
Irp-1B
CG6345
CG6325
CG12009
CG12017
Dys
CG15025
Sr-CII
RpS11
CG8858
CG42700
Cam
mtd
Tim17b1
piwi
TTLL4A
CG12253
SCAR
ATPsynG
prage
Adar
sim
CG43063
CHES-1-like
CG15478
lectin-28C
TwdlE
CG14535
Neu2
CG7519
CG7202
croc
Nc73EF
Cpr73D
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
stg
SP1029
CG45544
CG31445
stl
blw
CycB
CG42260
CG30271
CG9896
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
His4:CG33909
His4:CG33905
His4:CG33903
His4:CG33901
His4:CG33889
His4:CG33887
His4:CG33885
His4:CG33883
His4:CG31611
Cyp12d1-d
BBS4
CG13229
CG9380
EbpII
Ebp
Pcd
Obp99b
Naa40
Kul
CG34296
CG18731
CG15506
Obp99d
Dup99B
lectin-46Cb
lectin-46Ca
CG34033
CG1648
dila
CG30001
raskol
siz
CG9171
obst-E
Lasp
Dab
CG9692
CG43954
RagA-B
CG11970
CAHbeta
PGRP-LC
PGRP-LA
CG13192
out
Edg91
CG34281
CG14329
CG14327
CG14326
CG14324
CG14323
AttD
CG14325
Cyp12e1
CG46270
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
Shmt
CG3726
CG12236
CG4020
Act5C
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
Mtpalpha
jp
brwl
gcm
CG31709
fal
Gbs-76A
zip
uzip
SNF4Agamma
CD98hc
Sfp84E
Os-C
CG14762
Odc2
Odc1
CG6118
Act88F
Zasp52
CG33465
Myd88
Cpr100A
CG15546
CG15545
LanB2
CG3335
cmpy
CG34260
DNaseII
CG7785
CG7794
Cyp308a1
abd-A
tbrd-1
TfIIA-S
Pli
for
Drgx
galla-2
OXA1L
CG6418
CG6409
Blos4
Scp2
CG14903
CG14891
CG34435
CG34434
RhoGAP5A
Pop1
Mlc-c
CG42346
CG9220
Alp11
cm
CG4593
CG42308
CG32736
CG3032
par-1
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
CG15429
Atet
Prat2
mthl14
E(bx)
CG31324
CG6142
Cht6
CG33557
CG2990
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
stc
CG15269
Smyd5
Oga
Nelf-A
CG5862
CG3337
retm
frj
Rchy1
CG9527
CG43332
CG1077
Osi1
CG3556
Men
CG9777
mthl1
SNRPG
RpS19a
Rok
muc
CG5958
nerfin-2
CG33784
Alp13
CG33783
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
CG32264
RpS21
CG3117
CG3104
CG2991
CG2983
CG32461
ftz-f1
AP-2alpha
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
Cpr76Bc
Cpr76Bb
Cpr76Ba
qvr
E(Pc)
Lk
CG34039
CG42758
Pex3
Pdi
FucTA
CG32147
CG12316
CG7509
CG18808
ome
CG4914
CG43121
Tlk
Rala
wdp
Gp150
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
viaf
Pop2
Grip163
CG6928
Toll-7
CG42327
CG14715
cort
Nse1
Nhe3
Tsp
Usp47
DnaJ-1
CG11327
CG12730
slbo
bs
ncm
RpS26
CG12617
sm
CG43277
CG42753
CG18367
CG15124
CG31036
CG15517
CG15515
CG31038
Rbfox1
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
Lst
Cdk4
ms(3)K81
SPARC
Rb97D
CG5500
ball
Lerp
IntS12
His2Av
unk
VhaAC39-2
CG13829
Irk1
larp
Or98b
Moca-cyp
Gfat2
HnRNP-K
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
CG42749
CG13962
dnt
CG13086
CG17349
CG34253
CG44004
pzg
ppl
CG12974
AcCoAS
Cpr78Cb
Cpr78Ca
CG1688
CG9497
CG9498
ppk7
ppk14
CG9500
His2A:CG33808
His2A:CG33865
His2A:CG33862
His2A:CG33850
His2A:CG33847
His2A:CG33844
His2A:CG33841
His2A:CG33838
His2A:CG33835
His2A:CG33832
CG42268
Prp31
Msh6
CG7011
CG6878
fra
CG8818
CG8569
CG33632
achi
CG13151
cpo
Rim
CG43445
fax
TMS1
GluRS-m
TyrRS
CG33158
Usf
CG3546
CG3527
CG15912
CG11444
CG11436
His2B:CG33908
His2B:CG33906
His2B:CG33900
His2B:CG33888
His2B:CG33886
His2B:CG33884
His2B:CG33880
His2B:CG33878
His2B:CG33876
His2B:CG33874
His2B:CG33872
His2B:CG33870
His2B:CG33910
His2B:CG33904
His2B:CG33902
His2B:CG33898
His2B:CG33896
His2B:CG33894
His2B:CG33892
His2B:CG33890
His2B:CG33882
CG14186
CG14185
sNPF-R
tkv
Bub1
Bsg25D
Cyp4ac3
ninaA
dbe
aru
PNUTS
CG6184
CG6195
CG31220
CG31219
subdued
Vha13
Nup58
tapas
MED8
CG8929
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
Pex7
CG13305
Arr2
Sytalpha
Pez
Cpr
MBD-R2
CG4115
CG10041
CG10038
CG44956
Oli
CG6870
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
mthl2
TM9SF3
Eaf6
CG10591
TotX
Grik
hdly
fl(2)d
CG6329
CG13339
CG6347
CG6337
CG2199
Ptp61F
312
CG9988
CG14062
CG10011
mdlc
CG4390
CG17193
eya
Spn28Db
Spn28Da
SmE
CG7102
CG34132
ex
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
Rlip
CG5697
CG17278
CG43233
CG31683
CG18858
Cdc23
CG2493
tzn
Spc105R
Six4
CG3698
mud
mRNA-cap
Fbxl4
CG32599
CG1434
Mes2
CG7763
CG34054
CG30026
Smyd4-3
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
Srpk79D
Csp
CG11523
Rich
Ddx1
CG14270
CG12206
CG10804
CG10803
CG10802
glu
LSm7
ChLD3
BuGZ
shep
RpI135
CG4213
dnc
beat-IIIc
ver
nst
eIF2beta
Tsf2
Pmm2
Gcn5
CG34242
CG33927
chif
CaBP1
CG4455
CG42231
CG44405
CG42266
Egm
CG9005
Rsph3
CG3638
CG11403
Tao
CG14219
CG14205
CG14218
CG14204
Mp
cnn
cbs
CG30062
CG4991
CG16700
azot
CG30378
rnh1
drosha
PIG-X
CG8728
CG34431
CG34430
CG30380
CG30379
tara
Lmpt
CG32170
RpL37a
Loxl1
CG11334
CG11333
Got1
CysRS
CG30094
Wdr62
CG31663
CG15358
Asator
CG42784
Ca-beta
Vm32E
CG4788
fiz
Eo
CG14406
CG12398
CG9512
Eh
CG14331
CG14330
obe
Trissin
CG5213
Chs2
CG7458
sns
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
PK1-R
CG12402
CG6330
Spag1
Tsp97E
Gr97a
Kank
Lap1
CG12853
ADPS
CG10257
caps
CG46468
sigmar
l(2)dtl
CG5504
Alg3
Sesn
CG46429
CG18128
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
RSG7
CG13003
Mbs
Diap1
CheB93b
CheB93a
Ugt49B2
CG7907
CG1902
CG30339
GstT2
GstT1
CG12926
bbx
waw
Sep1
GNBP2
GNBP1
Capr
CG42495
Picot
CG34458
CG34457
CG15130
CG10949