ChIP-Atlas: Target genes

Potential target genes for CTCF

Query protein: CTCF
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7889142 | Central Nervous System
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CTCF's Target genes

◢ CTCF: Average

◢ SRX11499361: 0-14h embryos

◢ SRX11499362: 0-14h embryos

◢ SRX11499363: 0-14h embryos

◢ SRX11499364: 0-14h embryos

◢ SRX11499365: 0-14h embryos

◢ SRX11499366: 0-14h embryos

◢ SRX11499367: 0-14h embryos

◢ SRX11499368: 0-14h embryos

◢ SRX287743: 14-16h embryos

◢ SRX287744: 14-16h embryos

◢ SRX474576: 5-13h embryos

◢ SRX474577: 5-13h embryos

◢ SRX474578: 5-13h embryos

◢ SRX671941: 5-13h embryos

◢ SRX7889132: Central Nervous System

◢ SRX7889133: Central Nervous System

◢ SRX7889134: Central Nervous System

◢ SRX7889135: Central Nervous System

◣ SRX7889142: Central Nervous System

◢ SRX9660889: Central Nervous System

◢ SRX9660890: Central Nervous System

◢ SRX14474253: Cultured cell lines

◢ SRX14474261: Cultured cell lines

◢ SRX14474277: Cultured cell lines

◢ SRX14474281: Cultured cell lines

◢ SRX2010897: Embryos

◢ SRX6780074: Embryos

◢ SRX645427: Eye-antennal disc

◢ SRX085404: Kc167

◢ SRX085405: Kc167

◢ SRX085406: Kc167

◢ SRX100250: Kc167

◢ SRX100251: Kc167

◢ SRX1021223: Kc167

◢ SRX252226: Kc167

◢ SRX749039: Kc167

◢ SRX749040: Kc167

◢ SRX749041: Kc167

◢ SRX016158: S2

◢ SRX016160: S2

◢ SRX191913: S2

◢ SRX191914: S2

◢ SRX2638363: S2

◢ SRX2638364: S2

◢ SRX027388: White prepupae

◢ CTCF: STRING

mof
Usp30
CG16721
GAA1
unc-5
Hr51
wgn
Tak1
CG42579
hwt
Rubicon
CAH3
CARPB
CG1354
Ptpmeg2
CG3106
mRpS33
ema
CG17565
CG14881
CG31279
Or67c
CHES-1-like
CG15478
kirre
N
Tpst
CG46311
CG32633
CG32631
CG11816
Socs16D
CG12986
CG6398
Imp
sbr
CG15210
CG15209
CG8119
CG8117
CG9018
ACXD
Oseg2
CG32301
larp
Or98b
Moca-cyp
Gfat2
acj6
CG9164
nej
btd
shop
htk
Pde8
retn
flr
CG10222
sens
Shmt
CG3726
CG12236
CG4020
Act5C
Ten-a
Usp7
Cyp318a1
Cyp311a1
CG9220
Alp11
Pcf11
Cyp6a23
Cyp6a22
Cyp6a19
Cyp6a17
Cyp6a9
LanB2
CG3335
CG3638
CG11403
zfh1
Rbfox1
rtv
Ran
Lint-1
Dlic
CG32668
CG15201
Svil
CG16762
Wdr62
CG31663
CG15358
Lsd-2
CG9065
CG33178
CG33177
Rab3-GEF
CG5599
CG15027
Esyt2
ScpX
CG17597
CG10600
CG33120
CG31752
CG17321
CG44439
CG30369
CG2291
CG14760
CG14759
CG33226
CG30287
CG30286
CG30283
vir-1
eRF3
SC35
CG6405
CG6388
CG5446
CG5435
Spn
CG32295
Tsp68C
Hml
CG8757
CG8750
CG43184
Usp47
DnaJ-1
GABA-B-R3
Eaat2
elav
CG4293
Appl
CG31275
CG3358
CG7956
CG12502
Dci
dpr20
CG14186
CG14185
sNPF-R
Rrp46
Irp-1B
CG6345
CG6325
Gr98d
Gr98c
Gr98b
CG43693
CG7888
Wnt4
NtR
GM130
CG34205
a
gom
CG11269
Ipk1
Cib2
Sur-8
CREG
CG5863
CG5860
CG42824
CG42823
CG42798
CG34280
CG34279
CG17283
CG1077
Osi1
mRpS18B
Kua
CG13970
lectin-46Cb
lectin-46Ca
CG34033
CG1648
CG1688
flz
CG43980
nrv2
CG43610
CG17377
CG17376
CG17375
CG11236
Ir67c
Ir67b
CG12009
CG12017
CG15429
Atet
Ca-beta
Vm32E
CG4788
scramb1
CG8065
CG32055
Mef2
dila
CG30001
Mipp1
CG43206
CG4229
CG15631
Scp2
CG14903
CG14891
PGRP-LC
PGRP-LA
Ldh
CG10163
Best2
IFT52
Ent2
COX5BL
COX5B
CG9596
CG13766
Rsbp15
Cog1
CG4860
CG3916
CG17404
CG14742
CG12256
Fancm
Jupiter
CG6808
CG14711
CG14710
RpS15Aa
Jafrac1
IP3K2
CG15747
sick
CG10481
Gsc
CG13689
dco
Chchd3
Sox100B
CG5568
CG18586
SrpRbeta
Cp18
Cp15
CG6511
CG43965
CG32022
CG9171
obst-E
CG13192
ham
SIFaR
slbo
bs
Ref1
Dpck
CG1943
Ufl1
CG1965
CG1105
CG43867
CG3713
CG14635
RpLP2
CG8311
CG8306
CG8303
CG5089
Loxl1
CG11334
CG11333
Thor
Pgant4
msl-2
Pif1
ND-PDSW
CG31776
CAH15
otp
Rx
viaf
Pop2
Grip163
CG6928
CadN
CG5565
CG5561
CG5556
CG31924
NLaz
CG31659
CG14346
CG2841
mRpL14
Raf
Ilp6
TotX
Grik
hdly
mtDNA-helicase
RpS2
Bka
nAChRalpha6
Fkbp59
CG4537
CG34183
Fmr1
Su(var)2-HP2
Sec61beta
Had2
CG12863
soti
TfAP-2
cpo
Rim
CG43445
Cpr100A
CG15546
CG15545
CG12071
GILT3
GILT2
SPE
eIF3d1
CG18754
CG16710
Npc2b
CG9920
CCHa1
CG43332
RagA-B
CG11970
CAHbeta
RapGAP1
RpS28a
Mgat2
CG7920
Axn
RpS21
CG3117
CG3104
CG2991
CG2983
CG18557
insv
Elba2
ND-B17.2
Arpc5
Drp1
CG15394
ssp6
CG6610
CG13295
CG13293
RpL37a
CG9344
CG9313
CG34115
CG15651
CG15650
CG15649
PDZ-GEF
stl
blw
CycB
CG42260
CG30271
lectin-28C
TwdlE
CG14535
su(w[a])
TfIIA-S-2
CG14631
Picot
CG34458
CG34457
tbrd-1
TfIIA-S
Pli
CG43066
unk
VhaAC39-2
CG13829
Irk1
pkaap
crp
Cyp303a1
CG17329
CG13258
CG13962
CG15919
CG15615
Cpr67Fb
Cpr67Fa2
Cpr67Fa1
Aps
dar1
CG14974
CG10359
CG10357
nerfin-2
CG33784
Alp13
CG33783
CTCF
pst
Sec63
qm
Srp19
CG14834
for
Drgx
obe
Trissin
CG5213
Ugt303B3
Ugt303B2
Ugt303B1
CG10175
Rh6
CG10365
nau
CG10232
stg
SP1029
CG45544
CG31445
Cpr76Bc
Cpr76Bb
Cpr76Ba
bcd
Ama
zen
scpr-B
scpr-A
CG5214
CG31441
CG31388
CG17734
CG17721
Arfip
cnn
cbs
CG30062
Oatp30B
Cpr30B
CG17855
CG13114
CG13113
CG42268
Eh
CG14331
CG14330
CG31324
CG6142
Egm
CG9005
Cht6
CG33557
CG2990
loj
CG10467
Ets65A
snu
Sid
CG33346
CG6118
Act88F
ms(3)K81
SPARC
Rb97D
CG5500
ball
Lerp
IntS12
His2Av
sigmar
l(2)dtl
CG5504
Alg3
Sesn
CG46429
CG18128
CG15040
fra
CG8818
CG8569
CG33632
achi
CG13151
sced
geminin
Opbp
Dpit47
Adf1
CG9410
CG15908
Neu2
CG7519
CG7202
croc
InR
Gr89a
Decay
Cad89D
CG42342
Asator
Pex3
Pdi
FucTA
CG32147
CG12316
Men
ncm
RpS26
shot
DJ-1alpha
prage
Adar
Prp31
Msh6
CG7011
CG6878
CG42700
Cam
Abd-B
VhaM9.7-d
Actn3
nrv3
CG8665
Gr39b
nxf4
CG43290
CG31496
Lk
CG34039
CG42758
mthl2
TM9SF3
Eaf6
CG10591
stc
CG15269
CG12007
fal
Gbs-76A
Kank
Lap1
CG12853
ADPS
CG10257
CG31191
Atpalpha
Mst36Fb
CG43339
CG43338
drm
Sr-CIV
Spindly
IFT57
CG8852
CG8851
Indy
Prm
Fhos
CG6576
CG13306
Syn2
CG17032
elgi
Pka-C3
GXIVsPLA2
Sytalpha
Oli
CG6870
CG12617
lace
mRpS18C
CG42740
CG2218
CG2217
CG15536
CG15535
CG15534
CG15533
Vsx2
Nc73EF
Cpr73D
tzn
Spc105R
Six4
CG3698
CG2199
Ptp61F
312
CG15130
CG10949
Arpc2
CG31688
Mtpalpha
jp
brwl
ome
CG4914
CG43121
CG46468
wdp
Gp150
Spn28Db
Spn28Da
SmE
CG7102
CG34132
Dys
CG15025
l(3)mbn
Lcp65Ag3
Cpr65Au
Lcp65Ag2
Lcp65Ag1
mRpL55
cdi
CG6040
ATPsynD
Snp
CG44249
CG13501
CG13500
Dh31-R
CG4734
CG17047
cmpy
CG34260
CG43233
CG31683
CG18858
Cdc23
CG2493
mus304
mRpS26
RpIIIC53
CG7341
CG32195
CG13698
CG42853
dlt
alpha-Spec
Patj
JTBR
Cdc37
CG42676
CG12020
Toll-7
CG9380
EbpII
Ebp
mdlc
CG4390
CG17193
CG8300
CG4617
CG4615
fz4
Act57B
CG5819
CG2750
CG11356
gcm
CG31709
pan
CG8301
CG33654
CG16789
CG9399
CG9396
CG16790
Son
Kap-alpha3
sns
pzg
ppl
CG12974
AcCoAS
Cpr78Cb
Cpr78Ca
phyl
Oaz
glu
LSm7
ChLD3
BuGZ
ind
Rpn12R
CG43678
EAChm
CG43680
CG43679
CG18649
CG18581
CG13461
CG12310
Rgk3
ASPP
bor
asun
Mst89B
CG34165
CG15282
CG9497
abd-A
Pez
Cpr
Sox21a
DNaseII
CG7785
CG7794
CG31036
CG15517
CG15515
CG31038
Capa
CG34435
CG34434
RhoGAP5A
Pop1
Mlc-c
AP-2alpha
ebi
RpLP1
CG13692
CG13690
CG11885
BBS8
ex
ver
nst
eIF2beta
Tsf2
Pmm2
Gcn5
CG34242
SNF4Agamma
Gycbeta100B
CG15556
CG15554
CG9743
RpS7
CecC
CecB
CecA2
CecA1
Anp
ftz-f1
CG34384
CG31473
sgll
CG3014
CG2993
CG18268
Ubr1
Ndae1
CG31909
CG13786
CheB93b
CheB93a
Ugt49B2
CG7907
CG3355
Rpn13
Cp1
CG42806
PheRS-m
St4
CG18568
vkg
SP555
Col4a1
CG44001
CG44000
CG33995
CG31650
CG14042
AGO1
siz
sim
CG43063
timeout
Pkcdelta
mtSSB
CG6126
CG31287
CG5890
CG5886
CG14545
Nlg3
Eip75B
vnc
dpr6
Dronc
CG6685
CG6674
CG42455
CG13465
BobA
CkIIalpha-i3
CG13896
CG13895
ush
CG9593
alpha-Man-IIb
nsl1
bowl
bark
CG31960
CG9498
ppk7
ppk14
CG9500
ninaA
dbe
aru
PNUTS
Reg-2
CG13893
Myd88
zip
uzip
GlyP
CG4259
GNBP2
GNBP1
Capr
CG42495
SP1173
mthl14
E(bx)
meso18E
CG12531
retm
frj
Rchy1
CG9527
CG8945
CG4955
wcy
CG4949
CG43077
TyrRII
CG14321
Lgr1
Atg8b
CG9988
CG14062
CG10011
dnc
CG32264
pdgy
eag
CG9030
CG33128
CG31928
CG31926
CG31661
CG18131
gol
shep
Got1
CysRS
CG30094
CG42784
alpha-Man-Ia
Gip
CG43740
CG2909
CG15306
Fs
scb
EcR
sky
RPA2
Mtp
CG9272
CG43739
wit
Faa
CG32259
Gug
CG6983
Unr
Poc1
ImpL1
CG14110
CG14107
CG10171
kug
Tom20
Gabat
CG7668
bbx
waw
Sep1
sol
peng
tapas
MED8
CG8929
CG7509
CG18808
Usp10
CG13907
Hk
CD98hc
Sfp84E
Os-C
slim
Ttd14
CG5189
CG30120
Prp19
rswl
CG17669
CG43658
tkv
Bub1
Bsg25D
Cyp4ac3
CG6184
CG6195
CG31220
CG31219
subdued
Vha13
Nup58
vri
dnt
CG13086
CG17349
CG46301
Ca-Ma2d
nol
NaPi-III
CG32074
Sod1
mRpL2
Ufd1-like
FoxK
fus
fax
TMS1
GluRS-m
TyrRS
CG33158
Chs2
CG7458
Tbce
SCAP
CG14591
CG34211
east
PIG-K
CG2224
CDase
PH4alphaEFB
aralar1
Lasp
Dab
CG9692
CG43954
Asx
CG30197
Cpr51A
CG14762
Odc2
Odc1
Eglp4
Eglp2
Eglp3
apt
IM18
Eglp1
CG43209
CG42560
CG42559
CG10332
CG10947
Mp
bin
CG43439
CG32388
Pdp1
out