ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065554 | U2OS
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◣ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BRSK2
ZNF436
MAPRE2
GTPBP6
ITGB3BP
EFCAB7
AADACL4
MTRNR2L8
KCNJ15
BSDC1
PAQR8
CRLF2
COL4A6
COL4A5
SUPT7L
SLC4A1AP
PRKACB
C19orf18
FGD3
F2RL3
IRF6
MSH3
DHFR
MTRNR2L2
ZNF408
ARHGAP1
GABPB2
IKZF3
GALNT1
NBPF1
SCTR
OBSCN
KDM3A
ATF7IP
RBM33
YPEL3
TBX6
KRBA1
CYB5R4
MRPL55
PAXBP1
SLC2A8
LGALS3BP
TMEM79
SMG5
CDIPT
ZNF426
ABR
RPS26
SRPRB
THG1L
LCA5
CANT1
ZNF571
ZNF540
DHRS2
C1QTNF1
NOX5
CALCRL
UBB
PRPSAP1
WEE1
ARID1A
CCL20
SMYD3
RPH3AL
PLK3
TCTEX1D4
BTBD19
DEFA1B
DEFA1
MT1HL1
RPL27
IFI35
ZNF134
SAMD14
HDAC8
CELSR1
TFPT
PRPF31
L2HGDH
DMAC2L
AHCYL1
RRAGB
PIH1D2
NKAPD1
KAZN
CELF1
DYNC1H1
CCNI
ST20-MTHFS
SMTN
ZNF594
NDUFB3
FAM126B
PLA2G2A
CLPTM1
APOC2
RDH12
KSR1
CELA2A
LRIG2
GTPBP3
ANO8
GDNF
AURKAIP1
MAP3K14
VSIG1
ZSCAN32
ZNF174
SSBP1
RGPD2
RGPD1
RHOQ
ATP6V1E2
RPIA
PPIL3
NIF3L1
ZNF514
FCGR1A
PPP6R1
RCAN1
SERPIND1
RBBP5
ANKRD35
INTS5
GANAB
ZDHHC6
VTI1A
ARTN
GTPBP4
RPS24
POLR3A
EVPL
ZNF577
ZNF891
ZNF10
NOL12
EPHA2
TLE4
GNB1
ABRACL
SLC39A6
SAMD7
VARS2
GTF2H4
NEK2
LY6K
ISY1-RAB43
ISY1
CDK12
MED1
KDM5C
RAG2
IFTAP
ARHGAP39
EIF2S1
ATP6V1D
MAST2
PRSS21
SLC5A1
ZNF555
APOC3
APOA1
RAD51AP1
C12orf4
DUSP6
ZNF302
GJC1
ZNF383
CREM
ZNF585B
PDE12
PM20D2
IL17F
NARS2
TNFRSF1B
SIRT3
PSMD13
MRPS33
TBL1X
UBE3B
SLFN12
ZWINT
ZBTB26
RABGAP1
FGFBP3
ARHGEF2
CD2BP2
PRSS41
GBA
MAGEA11
IL22RA2
TESK2
MMACHC
CCDC163
BCL10
NKX1-1
DNAJC16
CASP9
FAAP20
ELFN2
SLC33A1
PISD
AKIRIN1
COX7A2
WDR83OS
WDR83
MAN2B1
WDR33
ZNHIT6
BAIAP2
HAX1
TSKU
KAT6B
SNIP1
DNALI1
UBAC1
AP1G1
STX1A
SOD2
TPM3
C1orf189
ITFG2
AGFG1
IGFL4
GCNT7
FAM209A
MID2
GPR35
B4GALT3
TTC26
KANK4
ACY3
SF3A3
PTP4A1
MTF2
ERICH4
DMAC2
DUX4
INKA2
DDX20
ZW10
CLDN25
AAAS
LACTBL1
TMEM125
GPC6
THEM4
ZMPSTE24
TMCO2
NPR1
ILF2
TRIM5
COIL
TRIM22
ZNF750
NME1-NME2
NME1
LRP6
PPRC1
DYNLRB2
ARMCX5-GPRASP2
ARMCX5
TMEM242
PROC
EPRS1
C3AR1
ARID3B
KCNH4
CITED4
HCRT
DMP1
EIF3F
SCMH1
NCOA7
STC1
LIMK1
AEBP2
IFI6
SELENOH
YWHAQ
ID2
NEMF
COX16
PACSIN2
COPS4
DND1
WDR55
TNPO3
PCDH9
DNAAF1
HSDL1
MICALL1
MTR
STK40
ZNF572
CD14
AKR1A1
ZNF3
SNRPD1
DDX42
CCDC47
RFFL
LMNA
NID1
PARP15
TYSND1
YTHDF2
HEMK1
C3orf18
PARP9
DTX3L
CYB561D1
ATXN7L2
CASP10
GLIPR1L2
RAB33A
AIFM1
MRPL54
APBA3
RHOC
JMJD1C
CHMP7
VPS35L
CEP120
USO1
SMAD5
KRT10
COL18A1
TPK1
PHC2
EDDM3A
C1orf174
PLEKHG1
MXI1
PRRT1B
RERE
MRPL1
ZBED9
ZNF790
CNGA1
RABGAP1L
RPL11
INTS2
NIPAL1
TMEM72
COQ8A
RNF125
TTC39C
ZNF226
LSG1
RMND1
ARMT1
RNF207
RPL22
HEATR1
FNTB
DNAJB12
ABLIM1
MED11
ZMYND15
CXCL16
TMEM127
CIAO1
PLAAT2
TTLL2
SGPP1
RPA2
ZNF793
KRT19
OPN4
TIMM10
SMTNL1
GLT6D1
REXO4
ADAMTS13
SLC25A53
FAM199X
KDM6B
PHF5A
ACO2
ZNF335
NR1I2
TIMP3
ZNF56
CGGBP1
C3orf38
LIG3
CDH1
CCNC
MTBP
MRPL13
MROH7
TBC1D19
EIF1AD
CST6
BANF1
LIMS1
MIDEAS
SLCO1A2
AGTPBP1
ELL
PLEKHH2
STAT3
TRUB2
COQ4
TUFT1
CCIN
SHOC2
BBIP1
RGPD6
ITPR3
C5AR1
SH2D5
OR13H1
BEST4
AK2
TRAFD1
CCKAR
BIK
CCDC130
UBE2L3
RIMBP3C
RIMBP3B
CORT
RSPH3
HEXB
PEAK1
HMG20A
PLAU
GAPDH
RCN1
PLK2
ZBTB33
USP21
UFC1
GPX1
PSMB11
UQCRC2
ZSCAN4
PSMB5
SFRP2
ZNFX1
ARHGEF3
TMEM107
CLASP2
SNX27
ARL15
LIMS4
LIMS3
SPATA12
EDF1
TXNRD1
RMI1
HNRNPK
CEP162
NYX
NHLH1
CPN2
MTA2
TUT1
TRMT11
GPS2
EIF5A
CALCB
ZBTB40
PTPRH
RBM25
CTR9
DHRS3
ZNF331
MIS18BP1
RCC2
ASAP3
KRT31
CENPP
NOL8
DYNC2I2
SMG9
GLRA1
CDC73
STN1
RPL12
LRSAM1
SRA1
SLC35A4
APBB3
DRD4
TMEM247
IFNL4
IFNL2
CRTAM
GLRX2
CDHR5
APOL6
SCT
RBMS2
MKLN1
GTF3C5
MAP7D2
FEM1C
LY6L
CLCN3
ZFP37
ENSA
MTMR11
CD24
FRRS1
NRL
DCAF11
CHAD
ZBTB38
ENPP1
RCAN2
DUSP14
AMHR2
CCDC97
TRMO
PSMB7
DDX47
SPOCK2
SIN3B
BNIP5
ANKRD1
BORCS7
CYP46A1
SLC25A33
TIMP4
RFXANK
BORCS8
PCNP
USP9X
MTHFD1L
FAM184A
CSTF2T
ZNF461
THAP12
GVQW3
NME7
BLZF1
HAPLN2
C19orf25
CLN3
APOBR
RHOD
ZNF623
ZNF829
ZNF568
PRKCSH
CCDC151
ZNF221
TIMM9
KIAA0586
TAGLN2
HKDC1
LONRF3
TBC1D22A
ZNF566
AASDH
CASP3
TNFRSF1A
ZNF704
FAM81B
ELSPBP1
BSPH1
VGLL1
ZSCAN30
LMTK2
TAF12
GYG2
PSAP
PRKG1
PXT1
KCTD20
TCIM
WSCD1
SHISA3
ISX
LDHD
ZNF24
TEX46
KDM1A
ZSCAN22
SCYL3
KCTD9
CDCA2
FAM89A
SLITRK5
GORASP2
POMGNT1
ZKSCAN2
EFHD1
TRMT1
NACC1
LURAP1
ZNHIT3
OPN1MW
OPN1MW3
OPN1MW2
NAV2
FKBP5
ZNF416
HEBP2
APOLD1
OCIAD2
CCDC142
TTC31
JUN
LSM4
PGLS
RIN2
ZSCAN23
NTN1
ZNF527
ZC3HAV1
MNAT1
ATL1
KCNMA1
XPNPEP3
ST13
DNAJB7
CEBPA
EIF4A3
SMG8
BNIP1
SESN1
CEP57L1
SOX30
UIMC1
ASIC3
TRAPPC8
TM2D1
SUGP1
MAU2
DNAL4
TEX28
SAP130
ZNF501
ZNF502
BZW2
STAT6
CCNG2
SCARB1
SLC7A11
MPP1
GAL3ST2
SYT16
KLHL34
FRA10AC1
RPS3A
BFSP1
KCNAB2
MVB12A
IRF9
CNIH3
ADAT1
DLX4
ZNF721
PIGG
BST2
ZFP30
WDR11
INPP5A
CCNY
UBQLN1
OVOL3
TBCB
POLR2I
SLC19A1
ADRA1A
EXPH5
PLS1
SLC39A9
ERH
CLASP1
EFCAB14
TFB1M
MYO1B
SLC41A3
PPIP5K2
GIN1
RBL1
ZRANB2
ZNF251
RFC4
FRAT1
FRAT2
PRAC2
PRAC1
HOXB13
CD109
SUMO3
NRARP
UTP3
ZNF300
PRPF18
LUC7L
FAM234A
ZNF75D
CTSB
GPN2
GNA12
GPATCH3
TOMM40
CD320
TBC1D1
TIAM2
C6orf118
ZNRF3
SAR1B
FBXO46
NFATC3
CTPS2
RIPPLY3
RPAIN
NUP88
FCRLA
PTPRN2
MSRA
NUB1
LMBR1
CHPF2
ABCF2
ZNF22
SIPA1L2
CPD
TYMP
ODF3B
KLHDC7B
PEF1
PTPRK
HTR3B
PNMA3
TDP2
ACOT13
MRPS18C
HELQ
NRSN2
SGMS2
NUDT5
CDC123
SULT1C2
GPR1
LGI2
CCL7
CCL11
CLEC4M
CD209
NAA20
NOP16
HIGD2A
EIF3E
NUDT9
NFYC
PLPP5
SSUH2
ZNF792
PSMD3
CMSS1
AGPAT3
ARMC1
IAPP
RNF223
RAI1
ENKUR
NDUFS7
RMND5A
MED18
SPSB1
TRIM25
CSNK1E
EIF2AK3
RTL9
SFXN3
PDZD7
ISLR
BANP
ZNF662
SMIM12
FANCC
ARHGEF18
PEMT
RGL2
PFDN6
STBD1
RPRD1A
PC
ADAMTS17
CACTIN
FERMT3
CARHSP1
RIIAD1
CELF3
MMP28
TRPV2
AQP12B
AQP12A
TTLL12
LZTR1
SNRPD3
GUCD1
ALG14
SIRT4
C19orf48
PREPL
CAMKMT
ZXDC
ROCK1
SASH1
BAMBI
SLC1A3
KLF6
TTLL1
GRAMD4
TTC32
NOTCH2
VPS13B
ZNF518A
PES1
ZFP36L1
PDF
NIP7
COG8
HBS1L
LRRFIP1
CYB561
SH3BP4
TEFM
RPS27A
CLHC1
CCDC69
CDKN1A
TNFRSF10B
RASL10B
MRPS23
SUGCT
MPLKIP
OPRL1
PCYT1A
RGS19
LKAAEAR1
SLCO4A1
RSRP1
PLAAT1
SPEF2
MSANTD4
NHSL1
C2CD4D
MYOM2
THEM5
RPS7
TXN2
MRPL48
TLE7
NOTCH2NLB
TIGD1
EIF4E2
RPL26
KRBA2
UFD1
CDC45
EHD2
PSMG4
C2orf66
GTF3C3
E2F2
CASP7
OSBPL8
PRDM1
PMEPA1
PHACTR4
RUFY4
ORC2
POLD4
SPR
HACD2
ZNF230
SLC23A3
IRAG1
RETREG2
CNPPD1
KAT7
CLDN7
CLIP2
LGI1
ATP5F1B
UBE2F
WBP1
INO80B
TMBIM1
WTAP
SNX3
FOXP4
TTC14
PIP5KL1
FBXO7
ZNF2
C12orf40
ABCD2
DPM2
NRDE2
SGSM3
FURIN
PNPLA5
PDE11A
RBM45
CLTC
DOC2A
IFT46
ARCN1
NEURL4
ACAP1
PIK3CB
PDZRN3
TLCD3B
C16orf92
GNA13
NEDD4L
TEF
ECPAS
AFF3
ZNF433
ZSCAN31
ELAC1
ZNF165
ABLIM2
ZNF878
TMBIM6
PUS10
PEX13
OR1F12
APOL2
SERPINA3
CES3
ZNF14
NECAP1
KIAA0319
SORBS1
ALDOA
TTC9B
CCNP
APOL1
PSG9
PDXP
EAPP
CCDC59
ARHGEF39
CEP85L
TMEM259
CNN2
SIT1
CCDC107
TMOD1
SF3A1
CCDC157
PAFAH1B1
HSCB
CHEK2
LIMCH1
STX12
ADAMTS16
VPS13D
CALD1
CNIH4
EXOC2
PRKAG2
SETD4
CBR1
IRF2BP2
PNISR
PJA1
SLC27A5
YJU2
RPS14
ZBTB45
KRTAP10-9
VPS52
RPS18
B3GALT4
TRAF4
CZIB
TCEANC
KDELR1
GRIN2D
CFAP43
ZNF823
PLA2R1
AKR1D1
UTRN
ZNF708
DNAJC25-GNG10
DNAJC25
INO80C
PLEKHM3
GABPA
ATP5PF
CCDC174
TUBB
MDC1