ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1799525 | CD4+ T cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◣ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DTX2
GBA
KCNJ15
THEM4
CAMK1D
DUSP6
SMCO1
GDPGP1
CIB1
ZWINT
ANXA2
PAXBP1
NECTIN4
HDAC7
ITGA4
PUM1
SFT2D3
ITGAL
FRG2C
SPATA13
KRT2
LIME1
SLC2A4RG
STX6
GCNT7
FAM209A
THAP11
NUTF2
CENPT
YPEL3
TBX6
FAIM
ZNF527
TNFAIP8
SF3A3
NOXO1
TBL3
RPS2
RNF151
PPIAL4F
PPIAL4E
PPIAL4D
FNBP1
FRG1
ZNF571
ZNF540
ZNF792
SSBP1
SORL1
TTLL12
NUF2
DDX18
SYTL2
PSTPIP1
DUX4
ZNF827
ZNF226
CD69
RUNX2
SKP2
LMBRD2
VTA1
NMBR
DMAP1
GPR68
ASB2
MRPL44
ZBTB20
TEDC1
CRIP1
CRIP2
NDUFS7
GMPS
GLS
TNRC6B
APBB1
EXO5
PDP1
STAG3
GPC2
TMEM255A
DCP1A
FRG2
ZNF550
TFPT
PRPF31
MYCBP2
USP25
PPIP5K2
GIN1
COQ9
CIAPIN1
HMGB1
USPL1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
HNRNPD
NME1-NME2
NME1
NAP1L3
FAM133A
ARHGAP15
TDP2
ACOT13
STX16
F2RL3
AP2B1
PEX12
ST20-MTHFS
COX16
CLUAP1
ALG10B
GTF2H2C_2
GTF2H2
MINDY3
SLC35E1
TEKT2
ADPRS
GTF2H2C
NSUN6
ARL5B
FAM227B
DTWD1
CHMP5
BAG1
MED18
SLC29A2
PSD4
NTRK1
SH2D2A
TM9SF1
IPO4
IRAK2
ORC4
MBD5
CARD6
RPL37
POLR3B
PCYOX1
TIA1
SATB1
DCAF10
GTPBP10
BRWD3
PPM1M
ZNF83
APOC3
APOA1
NDST2
MED23
ENPP3
ATP5F1B
ELOVL5
ARHGAP9
MARS1
RPS7
KMT2A
ORAI3
SETD1A
DCTN6
MBOAT4
FRA10AC1
CEP68
MAMDC2
SEC23B
NAT10
SARAF
GATM
SPATA5L1
LEPROTL1
LY9
RRN3
RAB18
CCNT1
MKLN1
HECA
TMEM167B
PHB2
TRAM1
MTF2
LCK
SNRPB
FLI1
INTS12
GSTCD
NLRP1
VSX1
TNFRSF1B
SUSD3
P3H4
FKBP10
ZNF791
ZNF490
RPL27
IFI35
TOR1AIP2
TOR1AIP1
ADORA2A
NDUFB3
FAM126B
CCDC59
TES
PWP1
ERCC5
EIF3E
TDRD9
ATP5MPL
ARID1B
LIPA
NUP133
NUCB2
MANEA
CTNNB1
NDUFAF1
CSK
CNIH1
ZNFX1
FGFBP3
HTT
PEX3
ADAT2
C16orf54
RAB5C
NR4A3
DNAJC25-GNG10
DNAJC25
TTC13
PRRG2
NOSIP
TATDN3
NSL1
GABPA
ATP5PF
WWOX
RBBP5
ARHGEF3
EIF2D
CPEB4
CBR4
GOSR1
LSP1
ING2
GTF2H3
EIF2B1
MDGA1
TMED2
SCAND1
SNX17
EIF2B4
ZNF513
PSRC1
TMEM262
SNX16
NSA2
GFM2
TSGA10
C2orf15
SSTR3
ZC3H13
PGBD4
EMC7
SCP2
SRPK2
PGK1
ADAP1
RPS11
LSM8
ZC3H15
IL36A
EPS8
TPR
ODR4
BCL9
LDB1
SAMD4B
GMFG
NOTCH2NLB
SIRT6
ANKRD24
SURF6
VPS29
RAD9B
WDR36
UBE2O
AANAT
TPP2
GPAM
NPAS4
ABLIM1
MTA2
TUT1
ALG10
SMAD7
PRRC2B
PTK2
STX18
STOML2
FAM214B
PIGO
ANXA2R
RPL26L1
USP45
TSTD3
SF3B1
CCAR2
C8orf58
RHOG
ING4
MRPS23
ZZZ3
ZNF555
RPS24
POLR3A
RPL29
MTRNR2L1
BCL3
SNX5
MGME1
UBA3
ARL6IP5
PRKCE
NOTCH2NLC
WDFY1
TRMT6
MCM8
GALK2
COPS2
ZNF829
ZNF568
DDX46
ZC3H12D
MTMR9
SMG6
ZNF408
ARHGAP1
DND1
WDR55
TTC32
SELPLG
RMDN1
CPNE3
GAA
IL2RB
CYP20A1
PFAS
STARD6
C18orf54
CBWD5
CBWD3
CBWD6
MRPS16
SLC33A1
DNAJC9
POLG2
DDX5
MRPL53
MOGS
MFSD8
ABHD18
TBC1D10A
CD2
SDHAF3
MED4
ATG5
ZNF696
TMEM222
VPS11
SS18L2
SEC22C
NKTR
MRPS31
PPP4R3B
KLHL20
SNRPD1
UBE4A
NOTCH2
SPRYD4
GPR61
GNAI3
SNAP47
JMJD4
RSL24D1
SUPT5H
RPS16
PACSIN2
PPP6C
RALBP1
ZNF44
COL23A1
RAB5A
EFHB
ECSCR
RNF207
RPL22
TLR6
MITD1
MFF
SP140L
MRPS18C
HELQ
EXOSC9
LEFTY1
FBXW7
MRPL21
IGHMBP2
BUD13
CBWD2
ZNF846
EIF3F
C1orf74
RANBP3
TMEM87A
GANC
WBP1
INO80B
LCP1
BTRC
EXOC5
AP5M1
SLAMF1
NUP214
RRM1
TAF12
PCNA
TMEM230
DGKA
PYM1
RPS15
SELENON
RAB43
PSMF1
THOC3
NOC4L
DDX51
PPME1
C2CD3
ATR
GNAL
CHMP1B
RABGAP1L
STAT1
KCTD5
ACAA2
SLC2A8
TRNAU1AP
XPC
LSM3
LRRN3
TNFRSF10A
ARHGAP45
KDM7A
FAM228B
TP53I3
SF3B6
ZFPL1
CDCA5
PRKAG1
TADA1
RGL2
PFDN6
WDR76
MFAP1
ARAP1
RGCC
FITM2
CAMK2D
ARHGEF12
KANSL1
MAP3K7CL
CCT8
PPP1R2
RAD54L2
HAX1
GPR65
LNPEP
NOTCH1
UBAP1
NUGGC
ELP3
HERPUD2
EIF1AD
CST6
BANF1
MAP1LC3B2
NDUFA12
PUM3
ZMPSTE24
TMCO2
TCTE3
ERMARD
TESPA1
CDK11A
MLEC
ARID1A
RPS20
SECISBP2L
AOPEP
WIPF1
C10orf88
IFIT3
TMEM68
TGS1
EXOSC6
CEP85L
USP4
RPS12
PRPF18
KRTAP17-1
KRTAP29-1
KRTAP16-1
TMEM116
ERP29
GRAMD4
ACOX3
TRMT44
DPYD
MFAP5
ZC3H3
RFX7
TEX9
ZNF581
ZNF580
NDUFAB1
MTIF3
FYN
SLC25A51
BIRC3
ARF6
TMEM242
SUGT1
CLCC1
CD2BP2
PIK3R1
NOTCH2NLA
GRIN1
COX6A1
VWA8
HILPDA
TBC1D19
PSMD3
SLC28A2
MGAT1
EDEM1
ZNF3
TRIP4
PCLAF
ZNF501
COPS6
WASHC2C
RPL39L
NSUN4
BRIX1
THUMPD3
MRPL10
LRRC46
OSBPL7
SCRN2
ENO1
FAM207A
NUP107
NDUFB6
RESF1
API5
KISS1R
R3HDM4
ACTR6
CDK5RAP1
CANT1
TTI2
THNSL2
KIAA1191
ARL10
FKBP1A
UTP23
OCIAD1
UBE2F
IL16
PKN2
RPS29
NSMAF
PA2G4
NR2C1
PXN
WDR4
SAP30
SLC44A1
ATXN7L3B
ZNF562
ADPGK
EGR2
ADH5
MAD1L1
PHF21A
MTPN
LUZP6
ZNF567
BACH2
ARHGEF1
CD79A
THAP9
SEC31A
RPS13
C12orf40
ABCD2
ARHGEF6
PAFAH2
DFFB
CEP104
PHKB
ITFG1
ZDHHC18
STRADA
ITPRIP
ZBTB2
UTP25
BACH1
UFL1
RMND1
ARMT1
NFAT5
HNRNPA1L2
SEC22B
FADD
LAX1
PSMD6
STK17B
GPR171
WDR70
NUP155
PTPN4
CRADD
SLC7A6OS
PRMT7
RNF138
UNC50
COA5
OXA1L
RGS1
LMAN2
RGS14
UBL7
LDLR
SGO1
COPS4
DHX16
MRPL19
LBH
PPP1R18
NRM
EVI2B
EVI2A
PIH1D1
ALDH16A1
HBS1L
PYGO2
PBXIP1
LOC101928120
KCNJ14
GRWD1
RER1
MORN1
BRF2
WDR43
RANBP2
WWP2
NOB1
ATP1B3
PTPN22
MRPL52
MMP14
SLC7A7
NOXA1
NDUFS2
ADAMTS4
CAP1
YBEY
MCM3AP
DOK2
XPO7
SYT11
GON4L
METTL18
C1orf112
FAM167B
PLCXD2
SPDL1
CHERP
RETSAT
GPD1L
BCDIN3D
ARHGDIB
ITPKB
TSEN15
FNDC7
TMEM186
PMM2
EPRS1
PSMB7
CASP8
ZNF805
AURKC
SMIM26
CELF2
INTS4
ZNF821
PTGER2
ARPC2
CWC25
SKIV2L
NELFE
ADAR
TRMT61B
S100P
RUNX1
PLEC
RCC1
ZNF207
C17orf75
GGNBP2
ACTR3
NDUFB8
HIF1AN
UBA52
POLR2J3
ICAM2
PLEKHF1
GZF1
EIF1B
PSMG1
SPTLC1
EIF2B2
XRCC2
DRG2
GSPT1
AGGF1
SLC38A2
RIC8A
BET1L
VIRMA
U2SURP
INO80D
ASXL2
SNRPC
MED31
C17orf100
RSPH14
RAB36
PPP1R11
RUVBL1
POLR1H
RNF39
C18orf25
TIMM23
ZNF668
ZNF646
ZNF302
BBS2
LSM5
AVL9
DPP8
TTYH2
AP3B1
RPL38
PDE4A
PIK3R4
PPIAL4C
CCDC86
FLT3LG
RAB8B
MTFP1
ZNF318
RTF2
LRRC37A3
PPIH
NARS1
ZNF286A
SPN
MTRES1
UBR4
LSG1
SLTM
TSFM
ZNF91
ZCCHC8
MAL
SUN2
POLR1F
MRPS35
ZBTB22
TAPBP
DAXX
SNUPN
SMIM40
NDUFS1
EEF1B2
RAB37
AQR
C3AR1
POLR2H
CLCN2
IRF2BPL
PARP8
POLE4
SLC30A6
PDE8A
SLA
HUS1
CABIN1
ANAPC10
ABCE1
ITCH
DBNDD2
TMEM41A
POLD1
GLO1
USP30
NR1H2
CPPED1
CCAR1
DDX19A
ATAD1
ZNF605
EIF2B3
SEPTIN9
SRP19
RGL4
RWDD1
TRIAP1
CYB5R4
POLR2K
SPAG1
FBXO43
URM1
NDUFB5
MRPL47
CPT2
RTCA
SYTL3
DYNLT1
TERF2
ETFBKMT
GNG14
DHPS
IARS2
BPNT1
TM2D3
POMP
SMARCC1
TTC28
ZFYVE16
DSN1
MOB4
CRLF3
ATAD5
PPP1R16B
RAPGEF6
NSFL1C
METTL3
ATXN1L
GTF2B
ZNF879
ZBTB43
EIF3D
CTPS2
SNX11
CBX1
TNFAIP8L1
SNX19
RAP2C
TMEM248
FMNL1
CALR
RAD23A
PDCD2
INTS1
SLC12A6
BRAP
ACAD10
NUTM1
NOP10
KIF21B
PPIAL4G
PIK3C3
RSRP1
CCDC69
CHIC2
TTLL5
ERG28
RALGAPB
RAD52
ZNF784
SMG8
MTERF1
TTC5
ATP5MC3
TMEM30A
LMNA
AP3S2
CRBN
DSE
DOCK8
TSPYL1
CMTR1
FAF2
ATG4C
EID2
EID2B
KCTD16
YIPF5
TRUB2
COQ4
ZCCHC4
SNRPB2
CUL5
VPS72
PIP5K1A
MMADHC
LINS1
ASB7
CWF19L2
SLC26A11
SGSH
GORASP2
PIGF
CRIPT
TMTC3
CEP290
PRKRIP1
FAM133B
TIMM9
KIAA0586
RIC1
THAP12
GVQW3
CSNK1A1
RBM7
C11orf71
ZNF773
SNCG
MMRN2
TM9SF2
CCDC102B
TMX3
OGFOD1
NUDT21
XRRA1
SPCS2
COX7C
PIGM
LGALS8
MRPL20
POLR2C
CCNL2
PARN
BFAR
NDUFC1
NAA15
YPEL1
FCHO1
GNPAT
C1orf131
TGFBR2
SYPL1
IL17RA
C15orf40
PPIL4
SEH1L
CIPC
TNFRSF14
KIFAP3
STK38
ZNF708
RPS3A
CD55
TRIM46
KRTCAP2
TMEM101
WDR24
SIRT4
PRKAB1
ZNF510
JMJD8
STUB1
TFAM
MFGE8
HAPLN3
ZNF134
TRIP11
IGFBP4
TIMMDC1
GIMAP1-GIMAP5
GIMAP1
ACTRT3
HACL1
BTD
MYNN
CASC3
TMEM109