ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3474299 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◣ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

ZNF550
MSH3
DHFR
MTRNR2L2
KCNJ15
ZSCAN32
ZNF174
SMYD3
MTRNR2L8
MTRNR2L1
BTBD8
KRBA1
ZSCAN31
CLDN18
DUX4
PAXBP1
RAB37
OBSCN
RGPD2
RGPD1
KIF5C
TMEM43
CHCHD4
SMCO1
FKBP9
ZNF514
OR4K17
ARHGAP45
PTPRN2
ZWINT
SLC28A2
LOC102724770
DGCR6
FAM178B
H4C8
LCE3B
LCE3A
NOX5
ZNF613
TSC22D3
NCBP2L
GBA
TTLL1
MID2
ZNF222
RAPH1
MMEL1
JDP2
ZNF134
DIP2B
DIO2
CRLF2
UQCRC1
TMEM89
BSDC1
SNAP47
HTR5A
JMJD4
HLA-DRB1
ABCC9
UBE3C
NPR1
ILF2
TINAGL1
APOC3
APOA1
NDUFS7
ZMYM3
LIMK2
ZNF317
ZNF91
UBC
DCP1A
C19orf18
RBBP5
LOC102724265
CHIT1
NXPE4
ST20-MTHFS
FBXO31
ARID3A
ZNF761
OTUD7A
RAX2
MATK
COX16
TDP2
ACOT13
HECW2
DACH1
POU2F1
FMO4
TRIM9
LMTK2
FUT8
ZBTB8B
DEFA6
TMED9
B4GALT7
ALLC
CASC3
RGS18
EPS8
MKLN1
FAM184A
SAMD7
TMEM259
CNN2
TOP3B
H2BC17
H2AC17
OR2B2
NGB
SMG6
C5orf46
LY6L
MYH2
FAM167A
BRSK2
PDP1
CRP
TEX38
ATPAF1
DNAH6
ATP5F1B
EIF2D
ZNF76
TBC1D19
ACP6
RD3L
ATP5MC2
ATAD2
TLE7
RAB5IF
IRAG2
STK39
CARD14
FAM227B
DTWD1
GPR35
NPAS4
FRG2
SLC44A1
DRAP1
C11orf68
USP30
SUB1
GPR19
GLT6D1
AURKAIP1
RAD54L2
CYP4X1
POLG
BLK
RHOT1
TNFRSF13B
PRIM1
HSD17B6
TPM1
GCNT7
FAM209A
WDR11
DEGS2
ZNF34
ZNF555
CCDC130
DDX1
COMTD1
OR4X2
RERE
ZSCAN18
UBE4A
KRTAP9-9
KRTAP9-6
COL23A1
COMMD2
RPS14
TACO1
TLR9
NCLN
S1PR4
LGI1
ZNFX1
DMAP1
JAK1
ITGB3BP
EFCAB7
SLC33A1
NCOA7
CXCR2
ZNF394
ZCCHC4
CCDC88B
BARHL1
HTN1
NUF2
CHST3
WWOX
RAB11FIP1
WDR33
MRPL38
TRIM65
S100P
KATNBL1
ZNF662
WDFY1
OR2F1
NARS2
TOR1A
CORIN
EIF4A3
CPT2
PIP
SAMD4B
GMFG
NCBP3
KNL1
POLN
HAUS3
DPH6
ANAPC1
METTL15
KIF18A
CCL24
HMGB1
USPL1
ZNF670
PDE7B
PRSS38
RGPD6
RGPD8
RGPD5
ERCC4
NEMF
IQSEC3
CITED4
MZT2A
FSIP2
PRDX6
LEP
ATP1A1
TNKS2
MTNR1B
TATDN3
NSL1
RHEX
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3D
TBC1D3J
ANKRD20A1
FRG2C
PDRG1
RRP15
ALG6
CNGA3
AGR3
CLEC4M
BFSP2
NDUFS2
ADAMTS4
FETUB
DBNDD2
PADI4
RPS29
SNX19
BCR
GPD1L
PPP6R1
TSPAN10
NPLOC4
OR6B1
PER3
SYT3
SLC36A2
NOD2
TAFA2
ACYP2
IGFALS
ZFP30
EPB41L2
CCDC150
UGT1A10
GGNBP2
MYO19
PIGW
FAM98B
USHBP1
BABAM1
FAM25E
NEUROD4
MRPL28
C2orf88
DSTYK
CIZ1
DNM1
CDHR1
TRPC3
SNTG2
ZNF708
C2orf66
NOTCH2NLB
LRP11
FGD3
STX18
TM9SF1
IPO4
TTYH1
MTF2
CALM1
TOR1AIP2
TOR1AIP1
MRPL21
IGHMBP2
CDYL
IKZF3
ZPBP2
FAF1
CDKN2C
MAP3K7CL
ZNF124
SPINK8
COQ9
CIAPIN1
RTTN
ARSD
DUS1L
PRSS22
SCRT2
LOC388282
SLC24A1
INTS14
FOXN1
CRH
PRR25
GNG13
CREG1
CHTF18
RPUSD1
TMEM229B
STRBP
TRIP4
PCLAF
IQGAP2
TJAP1
RAG2
IFTAP
FAM174B
CLEC19A
ZNF433
ZNF501
AP3S2
ZNF502
IRAK2
SMIM12
SMIM17
NAP1L4
RTP5
COPS4
COG2
SPTBN4
ZFP37
DENND11
CCDC187
BLVRB
CALCB
DRG2
CLTB
CDC73
RPS6KB2
PTPRCAP
PHF2
CEP112
SF3A3
TTLL12
SCARF1
RILP
GNAL
RNF217
PCYT1A
PLK1
WNT9A
IAPP
GABARAPL1
PAX4
RPS7
TEFM
CCDC92B
SCIMP
NDST2
ADAMTS17
NEMP1
NAB2
MAMDC2
ZNF440
ZNF491
TRAM1
GRM4
PDE8A
ALG10B
NUP107
CNTNAP4
ACOX3
MKRN2OS
MKRN2
XYLB
CFHR4
ZER1
RAPGEF1
CASTOR1
CXCL8
MYLK
LAG3
SLC38A10
KRTDAP
ABRA
FRA10AC1
GPAM
OR2AP1
SPANXC
ISM1
KCNH7
LHX6
UBE2F
CNGA1
TLE2
TLE5
SLC44A3
NUDT15
EPRS1
MRPS31
FAM207A
POLE4
ARHGAP32
PSMD9
HPD
PCDH1
SELENOH
GPX3
LDHD
B4GALNT4
CYP17A1
UTP3
ELAVL3
FGD4
CSRP1
NBPF11
THBS1
GBP7
ZMAT2
HARS2
HARS1
KLHL12
CDK2AP1
ADTRP
WASHC3
CCNB1IP1
PARP2
TMED1
CBR3
MIER2
CACNG4
RHOT2
RHBDL1
NCOA3
RAF1
PCARE
OR10A3
DUSP15
SHTN1
ADAM2
NSFL1C
MPZL1
SPACA3
ZBED9
PARP15
GSTM5
SLC25A51
DPP9
SCTR
IMP4
CCDC115
USP2
ZNF792
ZBTB26
RABGAP1
UIMC1
CERS3
RPL22L1
MFAP4
PAX5
CAPN2
ATAD2B
ZNF527
ARHGEF39
SIT1
CCDC107
ZZEF1
CYB5D2
CEBPA
BCAT2
ABLIM1
HIBADH
AARS2
TRIM52
COL6A1
RGS21
TGM1
RABGGTA
SNX18
TFAP4
PNPLA6
NUAK2
PRKAR2A
THG1L
HECTD2
SYK
CLUAP1
C16orf90
TMC7
KRTAP10-12
GINS1
LAMB2
SLF1
KIAA0825
LIMCH1
ADRM1
STX6
TYW3
CRYZ
NINJ1
CFAP73
THEM4
YPEL3
TBX6
TSKU
F2RL3
ZNF436
TATDN2
CYB5R4
ZNHIT6
AADACL4
COX6A1
THUMPD1
DCTN6
MBOAT4
SLC30A7
EXTL2
GTPBP6
ZNF562
DUSP6
EIF4EBP1
FAM153B
METTL8
DCAF17
SNCG
MMRN2
GTPBP4
TEAD2
DKKL1
ZSCAN30
NT5C3A
BPIFB3
MANEA
TBC1D22A
PDE11A
GORASP2
CTAG1B
CTAG1A
CDCA7
ZNF3
IER3IP1
LMLN
IQCG
HACD2
ZNF24
SARS2
MRPS12
ELAC1
SUMO3
COMT
PEX7
PTGER2
TMEM242
TTC7B
GRAMD4
FEM1C
SNX11
CBX1
TXNRD2
PPIG
MAP3K4
FAM234B
ZNF572
COL18A1
SPATA33
SLC27A5
FAM193B
ZNF143
APOBEC3B
BCAR3
LGALS12
ZNF426
CD2
ADAM21
ZNF341
KAT6B
AFAP1
PLAAT5
ARHGAP39
TLR2
FGL2
SNX20
ZNF324B
ZNF117
VPS13D
SSBP1
SAP130
TSPAN5
MRPS16
IFI6
CYP2C9
MINDY3
LUC7L2
FMC1-LUC7L2
FMC1
PRRT1B
ACY3
ZNF132
EDF1
MON2
RPL39L
TEDC1
CRIP1
TACC1
ANP32D
PUM1
PXDNL
IL21R
GPRC5C
STX16
LBP
CRIP2
SCCPDH
FAAH
DTX2
MROH7
RFC1
CEP85
CHD1L
CNOT3
RBPJ
SHISAL2B
EXOC6
C4B_2
C4B
IL22RA2
MED23
ENPP3
UBE2D3
ART1
ZNF627
SDR42E1
ADCY10
CISD2
IQGAP1
ST6GALNAC6
INKA2
DDX20
CLIC3
ST3GAL5
SLC1A7
C10orf143
ACAA2
DMXL2
BAAT
NME1-NME2
NME1
ZNF165
AKR7A3
TMEM70
RPL27
RABGAP1L
DNAJC25-GNG10
DNAJC25
LMLN2
PEX3
ADAT2
BANP
YWHAQ
IL36A
DIP2A
SEM1
MDM4
TMEM41A
ZNF623
LOC110384692
C4A
ZNF83
INTS12
GSTCD
YJU2
YY1AP1
DAP3
JMJD1C
GALNT1
IFI35
PLEC
SATB1
SULT1C3
CEP72
B4GALNT3
NKX1-1
RBM33
ZMPSTE24
TMEM262
NDUFB3
FAM126B
ELOC
LCN15
MRPL44
ZNF577
IFT88
CYC1
NOS3
KMT2A
GDPGP1
CIB1
ZBTB44
NARF
GJC3
SELENBP1
TTC32
PNMA3
FASTKD1
SAMD14
METTL7A
DCAF10
GPAA1
POLD1
BAX
MRPS33
FDX1
MRPL55
CALD1
C2orf69
POLR2J3
BRF2
TTC30B
HERPUD2
LCN8
MAPRE2
SGPP1
PROKR2
SRPRB
ZNF594
TCF25
TMEM14C
TMCO2
GTF2H2C_2
NRARP
SKP2
LMBRD2
HAUS5
GTF2H2
SLC41A3
GLRA1
APOL4
CLK4
CARD6
TRMT44
GTF2H2C
ZNF226
PRKACB
FRMPD4
ZNF280A
CHMP7
ENG
MYOG
TNXB
MOB3A
IZUMO4
PPP2R3A
TMEM106C
BTN3A3
RPL37
PSMD8
PNPLA7
MRPL41
DPY19L4
PHRF1
ZNF487
ZNF443
PIK3R1
SPATA13
PRELID3B
CYBC1
PAFAH2
COQ8A
RBBP9
ABLIM2
TMPRSS12
TMEM62
ADI1
FN3K
EXOSC4
EXOC3
C1orf159
ZNF878
ZNF561
ZNF614
RSF1
AAMDC
EAPP
POLR3B
CEACAM21
ANGEL2
UCKL1
LIPA
TTC26
IFNAR2
FEM1B
RSU1
NME4
DECR2
ADCY3
FAIM
LCN6
CCDC200
KDM3A
SMARCD2
TFPT
PRPF31
FKBP5
ZNF408
ARHGAP1
ACBD6
CAT
YTHDC2
CLDN16
ACER2
PPIP5K2
GTDC1
GIN1
TAS2R39
CCDC59
PSEN1
BAIAP2
REEP3
PCYOX1
GALK2
THAP11
PDCD7
TRIP11
PRAMEF1
GCNT3
ZSCAN29
TUBGCP4
PPP1R11
CYP4F22
PAIP2B
FRG1
DNAJB12
GIMAP4
SFT2D3
TIGD2
GTF3C3
SEMA3D
TMCC3
EIF3F
BAG3
MAD1L1
TMEM68
TGS1
ZKSCAN7
NUTF2
CENPT
TESK2
MMACHC
CCDC163
VTA1
NMBR
ZKSCAN3
VARS2
GTF2H4
LOC100289561
MLLT1
RPIA
SUPT7L
SLC4A1AP
LRPAP1
CATIP
REXO4
ADAMTS13
RPL11
TM9SF2
GSTA4
PLA2G1B
EIF3L
ANKRD54
ZNF391
LSG1
WDR36
INTS5
GANAB
AUH
GLO1
TBC1D13
RUVBL1
MRPL40
HLA-E
HIRA
NBPF1
CD209
INO80C
ACTL8
FGFBP3
VPS37C
ZNF32
NRBP2
SLC2A7
SMG8
BORCS7
STAT3
PARK7
CLPP
SNIP1
DNALI1
TIMELESS
MSRA
MACC1
BMS1
CDK5RAP1
SAR1B
TMEM44
WDR74
RPGRIP1L
FTO
KIAA1549
COLEC11
TEX46
KDM1A
ACTRT3
MAP3K2
MTERF1
ITGA4
ZNF350
PLA2G4E
L2HGDH
DMAC2L
EIF1AD
CST6
BANF1
THOC5
POLR1H
CAMK1D
KRTAP10-7
RMND5A
LRIG2
EFCAB10
RNF187
MYL12A
STAT1
TXNL4B
DHX38
ETFBKMT
STX5
ANK3
CCNT1
TTC13
ZBTB45
ZNF841
ESR2
SCMH1
PRIM2
TMCC1
ZNF891
ZNF10
ORC4
MBD5
REN
ZNF829
ZNF568
DCLRE1B
AP4B1
TSEN15
ZNF582
SNX17
EIF2B4
TAF12
ORC5
SCAND1
PDE6D
COPS7B
DEK
SUPT6H
SDF2
GBP4
C3orf14