ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX553665 | hESC H1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◣ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FAM153B
FRG2C
KCNJ15
FRG2
NKX1-1
ADAM21
ZWINT
LOC102724770
DGCR6
THEM4
UCKL1
ZNF512B
CNOT3
SULT1C3
CHIT1
BRSK2
ANP32D
LMLN2
IFNAR2
THUMPD1
EIF4A3
ZNF433
CYP2C9
ZSCAN30
EIF4EBP1
PXDNL
ZNHIT6
ATP5F1B
F2RL3
ART1
CFHR4
TLR2
DUX4
RGS18
SNCG
MMRN2
PTGER2
ZBTB8B
SUPT6H
SDF2
RHOT1
MAD1L1
ZNF527
PIN4
WDR33
RBPJ
LILRA5
APOBEC3B
COL23A1
C1GALT1C1L
RAD54L
CNGA1
PPP1R3B
SHISAL2B
PHRF1
PIP
ZNF117
ZKSCAN7
IRAK2
SARS2
MRPS12
PDP1
CALCB
CADM2
CRP
COX6A1
C2CD4C
COLEC11
DCTN6
MBOAT4
C16orf54
MANEA
OR6J1
RGS21
GCNT7
FAM209A
BAAT
REM1
DEFB124
PAIP2B
GORASP2
NFE2L3
PPP2R3A
POLD1
VPS37C
FAM234B
LHFPL4
ZNF24
B4GALNT4
LEP
CYP4F11
MYO5C
DBNDD2
SPATA6
ZNF611
TACC1
PRDX3
OLFML3
LMLN
IQCG
BCAR3
ATP9B
CTSF
ZNF550
MOS
DMXL2
BPIFB3
PADI4
DUSP16
CLPP
KRTAP5-9
KRTAP5-10
SMCO1
SPATA22
ASPA
MYH2
VBP1
ALKAL1
ZNF143
MAPK10
MTERF1
CTAG1B
CTAG1A
RPL10L
TTC7B
PRDX6
NEU1
CPM
TMX2
MED19
PIAS2
C5orf60
CXCR2
MAMDC2
MRTFA
UPK1B
TMCC1
MID2
TIMELESS
CASP10
B4GALNT3
MLLT1
GIMAP4
MAGEB1
MACROD1
SLC22A25
VN1R4
MAP3K19
MROH2B
CCL26
LSS
EDNRA
CLDN4
METTL27
GPD1L
KRTAP5-2
KRTAP5-3
SPATA33
RBM5
SLC41A3
C1orf159
ZNF708
ZNF761
METTL8
DCAF17
PRSS38
MRLN
ENPP1
TMEM106C
UBE4B
ATP6V0A1
ZNF566
INPP5F
DGKQ
ACBD6
TULP4
NT5C3A
CYP17A1
PLG
MRAP2
SIVA1
FGD3
CPT2
PARK7
GCNT1
BTN3A3
ACSM2B
C2orf88
STXBP5L
SATB1
HAUS5
GPR35
GSTM1
SEM1
PAAF1
IQCF2
SMYD3
TMEM239
C20orf141
LRIG2
ARHGAP19
C9orf64
EML5
DDX23
ZNF487
FAM193B
OR1E3
TMEM44
INPP4A
CCDC149
BCR
FDX1
ANGEL2
RPGRIP1L
FTO
RWDD2B
TMEM125
GTPBP4
RPL11
SPATA13
NARF
CYBC1
EDF1
DNAJC25-GNG10
DNAJC25
BTNL9
MOB3A
IZUMO4
PNPLA7
MRPL41
SLC30A7
EXTL2
RFC1
PROKR2
H4C11
H4C12
C2orf66
DIP2B
B4GALNT2
GPR146
SCGB2A2
SRPRB
TMEM202
PPIG
FASTKD1
EIF3C
PSMD8
TNP1
CLEC4M
CD209
INTS9
HMBOX1
PSPC1
ETFBKMT
BTBD8
TTC30B
ZNF577
RAB6D
ZNF665
FAM177A1
COMT
TXNRD2
ALDH7A1
TBC1D5
SLC2A11
PER3
MINDY3
SMIM31
FKBP11
PTCHD4
SLC2A7
TMEM242
FEM1C
CLIC3
RMDN2
CYP4X1
VTCN1
SLC28A2
MON2
HORMAD1
PPM1K
SPACA3
OR2AP1
ANXA3
PABPC4L
NCKAP1L
EML2
GSTM5
PDCD7
F2RL1
CEACAM21
OR8B3
ADCY10
LIPG
MAP3K4
MRPS16
PSEN1
ZNF324B
OR4K17
ZNF132
ACSM2A
PCYOX1
GTF2A1L
ACAA2
ZER1
TBC1D13
ARHGAP45
UGT1A10
ZDHHC9
SCCPDH
RSU1
HACD2
ZNF589
TBC1D14
DLAT
CAMP
ACY3
ZNF486
CYB5R4
FAM184A
OR10J1
PLGLB2
PLGLB1
PHGDH
SLC38A9
S100A2
MPHOSPH8
TFPI
ITPR2
DRD4
AIG1
CTSV
RTP3
LTF
C10orf53
WDR3
GDAP2
ESCO1
RNF212B
PAM16
ST3GAL5
TBC1D22A
CNOT6
ZNF429
TNFRSF6B
SYNJ2BP-COX16
SYNJ2BP
C10orf99
GIMAP8
NUDT3
ACER2
PIK3R1
THOC5
PDCD2
UBN2
RPL39L
RTCA
CCDC83
CDC34
SPRN
SEMA3D
IFIT1
CRYGB
CRYGC
ADAMTS9
RTP5
ZNF677
VN1R2
OR1J4
OR1J2
PHB
VCX3B
TMCC3
CCDC38
AMDHD1
C10orf143
ELAC1
STAM2
SCAF11
ZNF280D
LBR
ZNF792
NUP93
NUDT15
CNIH4
ASNSD1
ASDURF
C4B_2
C4B
LOC110384692
C4A
MAP3K2
STK19
DXO
TSPAN8
AKR7A3
TMEM62
H1-7
DIO2
VKORC1
BCKDK
HIGD1A
OR7C2
ZNF83
SPRR2G
SEC63
KIF1A
TMEM68
TGS1
CYP19A1
PUS1
SLCO1B3-SLCO1B7
SLCO1B3
NETO2
NXPE4
SLC17A5
NOXRED1
ZNF627
ACSF3
ZNF562
PRKAG2
HLA-F
VPS11
HYOU1
MRPL15
RPL32
TSKU
ZNF443
NAXD
DCTN4
ERBB3
IL22RA2
PTPDC1
ARRDC2
LMBR1L
HNRNPL
HRH2
FGFBP2
SMAD1
ALDH3A2
OMP
ADI1
RNF19B
THOC2
KRTAP12-2
ABCC10
PLSCR4
CCL24
SDR42E1
ZNF329
DDC
RPEL1
IFNA5
OR14I1
HLA-C
SLC35G5
CELF2
COQ9
CIAPIN1
CAT
TAAR9
SEL1L
ZDHHC18
ZNF613
DIP2A
UGT1A1
DNAJB3
KRTAP10-7
KRTAP10-8
APOL4
OR56A5
ZNF341
LRTM2
TMBIM4
CTNND2
CAPN8
RPL30
CCDC88C
PTGES2
MRPS36
OR5H15
GLT6D1
CCNDBP1
AADACL4
FAIM
CEP70
USHBP1
BABAM1
EDARADD
STK32C
MIPOL1
ZFP42
GTPBP6
C2orf69
KCNF1
YIPF7
ORAI1
CLN8
RGS11
FAM47A
PDIA2
ARHGDIG
PGM2
RTP1
MKLN1
VPS13D
DNAJC3
URI1
XPO5
POLH
GTF3C2
MACROH2A1
GASK1A
AP1AR
PPP2R5A
POU2F1
PRAMEF1
AGL
ZBTB44
CLEC12A
RPS10-NUDT3
RPS10
BLOC1S2
IL34
ELAPOR1
SLC35G4
PNMA3
MGA
TCEAL4
MUC21
GPR45
CTAGE9
FAM120B
SIMC1
DLL1
TYW3
CRYZ
CHST3
ZNF680
MARS2
FGL2
PIGZ
NCEH1
NMNAT2
NRL
DCAF11
SIAE
ERICH3
TMPRSS7
GFOD2
SRSF7
EDEM2
CCNY
SPZ1
SLC27A5
VAMP1
CD83
NRBP2
WWTR1
STAG1
PRPF8
MCF2L2
TSPAN5
CTAGE8
CTAGE4
CD14
GINS1
KLHL41
VCX3A
GAS2L3
ERN2
UNC79
BTBD7
COX8C
UGT1A4
UGT1A3
AHCYL2
REEP6
PCSK4
ADH1B
RANGAP1
FNIP2
ZC3H7B
SMTNL2
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
SPAAR
HRCT1
FBXO31
LIPA
EHD2
PIRT
METTL7A
CD248
CDC23
SLC27A2
ZSCAN32
ZNF174
SUMO3
PEX7
ERV3-1-ZNF117
ERV3-1
BDH1
PRAME
GLYAT
IGFALS
TRIM69
TTC5
MTRNR2L1
C5orf34
PRAMEF14
IL1RL1
WDR17
KLRD1
FABP6
UHRF1BP1
SLC25A12
EMC8
COX4I1
GOLGA7B
RCBTB1
DNAH6
KRT82
KRTAP10-5
KRTAP10-4
LCN15
LCN8
LCN6
DYNC2I1
IL36B
IL36RN
KCNMA1
HSD3B1
MYLK
APOD
ST20-MTHFS
RNASET2
ASB18
SH2D4B
SPATA2
IER3IP1
MSRA
B3GALT2
MIF
ADGRA1
GTDC1
ENTPD1
SFTPD
SYN3
FBXL12
CYB5A
ACRV1
CLIC5
GCGR
SLC25A18
TM9SF2
SNX16
LPIN2
CASP4
USP17L21
USP17L20
USP17L12
USP17L22
IFI6
ZNF557
PDE4DIP
MBD3L3
RGSL1
PDE11A
CRELD1
UGT3A1
PDRG1
LAMA5
NANOGP8
FANK1
MKRN3
TMPRSS12
ARHGAP28
MOGAT2
CDC14C
MMS22L
PLGRKT
TAFA3
SAGE1
CT45A10
OR2L5
RABGEF1
SVOPL
NDUFV1
ZNF705A
LIMS2
SLC35G3
PRIM2
GLS2
LRPAP1
LCE3B
LCE3A
RABL6
CCDC183
OBSCN
C3orf14
KIF2C
LIM2
ZNF114
EIF4E
NKG7
TMUB2
ABL2
TEX19
MS4A10
IAH1
MORC1
C1QC
C1QA
ZNF426
ZNF662
ARL8B
SH3BP5L
PTPN12
ZNF672
SPRR2F
YJU2
PHC2
EHD4
PKP3
LRRC36
KCTD19
PFKFB3
HILPDA
CREBL2
HYAL1
NAA80
HYAL3
PIH1D1
ALDH16A1
CIPC
CBLL1
RTL6
CCR3
LRP5L
CPA1
MTFR1
SSTR5
EIF4EBP2
FRRS1
RICTOR
TBCK
AIMP1
TFAP2B
PRR16
SH3D19
TTYH3
VCX
ZNF100
MS4A13
GALNT1
LGR5
PPEF2
CDYL
MS4A1
AFM
TRIP11
GOLGA6L7
ENHO
OR10A7
MUC20
NPHS2
RNASE10
NPR3
TTC38
PKDREJ
C7orf50
ELAPOR2
ARL13A
LDHD
TNFRSF13B
PRKAA1
PXDN
PDE1C
COL26A1
UBE2D3
CISD2
RNF169
CHRDL2
FAAH2
SULT1B1
FRMD3
CFAP73
CHMP7
CLDN16
EFCAB10
OAZ3
MRPL9
TM4SF1
AFAP1
BANP
YAF2
MEST
OR6C4
HLA-A
KLHL33
HLA-E
METTL16
NSUN7
TNNI1
OR2Z1
ZNF614
OR5AN1
RAB29
BRMS1L
HTN3
ZNF560
KMT2A
EPM2A
PRR4
ZNF485
ROBO2
CLEC4E
ASB16
C2CD6
FAM151A
USP17L18
USP17L13
USP17L11
USP17L10
ASPSCR1
CD200R1L
TAS2R4
CHD1L
ZNF879
HSD17B4
FMO5
SERHL2
PPARD
DYNLL2
CDCA7
PDS5B
NOC4L
DDX51
C4BPB
C4BPA
CHODL
USP17L17
USP17L15
LOC100287896
LIPT2
SCAPER
TEDDM1
SPAG5
UGDH
RSKR
ZMYM5
MAPK12
IL22
NCOA7
ZNF34
PPA1
TLR1
PLA2G2E
ZNF788P
DEFB108B
NET1
SPARCL1
SUN1
NLRP2B
TUBAL3
PLA2G1B
OTUD7A
FANCI
NAT8
SGCE
PEG10
CARS1
SPDYE13
ARHGAP40
CLN6
RDH16
ART5
CYP2C8
OR1D2
ZNF623
CRYAA
CRYAA2
SPINK5
FBXL2
ZNF555
PRSS41
TMOD1
C9orf72
CYP1A1
HBB
CLK4
EPB41L2
FKTN
GML
SERPINF2
FIGNL1
OR5M8
FRMPD4
TAS1R1
NOL9
SET
ANKRD60
DPP4
CRY2
CCDC200
ID2
TSACC
CHAF1B
TMEM98
PDGFRL
OR4X2
ZNF582
ZNF583
PDAP1
BUD31
ANGEL1
ZNF28
GCSAML
LRRC74A
ADAM20
HS2ST1
ABHD3
LGR6
TRIM56
ENOSF1
DBI
C2orf76
IQGAP2
TNFRSF21
YY1AP1
DAP3
XRCC6
DESI1
CATSPER2
PLA2G6
SLC22A1
LCN9
ZNF134
TMC5
APOC1
GCNT3
FAM25E
ZNF699
ZNF311
MROH7
SLC25A48
CRYBB2
PRAMEF13
SECTM1
KITLG
CCR2
PDGFRA
UGT2A3
YWHAB
ARHGAP39
ACOX3
TRMT44
ZNF398
ZNF425
CCS
CCDC87
GINS3
NEUROG3
ACSF2
HGC6.3
F11R
ACOT2
HEATR4
TBL1XR1
FANCC
TSTD1
BTNL10
WFDC13
ZNF572
RANBP9
MMP8
CD47
FOLR3
RNF135
FAF1
AARSD1
RUNDC1
PTGES3L-AARSD1
PTGES3L
ALOX12B
MUC3A
PCBP3
RAB3C
FAM240C
GALK2
GLO1
PRIM1
MYL12A