ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9823127 | GM12878
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◣ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DUX4
RANGAP1
FRG2C
STARD10
PHF13
ZNF286A
TIMM22
NAA80
HYAL3
IFRD2
TNFAIP1
IFT20
IPO13
PSMC4
TBC1D23
ZNF331
RPL36
MICOS13
HSD11B1L
AP2S1
ARHGAP35
ERCC4
HDGF
MRPL24
GSPT1
RTEL1
STMN3
GPI
ZNF414
SF3B2
GAL3ST3
TESK2
MMACHC
CCDC163
SERTAD3
SEC11C
LMLN2
ACIN1
C14orf119
RPS27A
CLHC1
FAM193A
PAFAH2
ZNF565
MBD1
CXXC1
ZNF146
TMEM245
CLPB
NOLC1
MTRNR2L1
TERF2
STIL
ANO10
PSMD2
ZNF256
CARM1
VPS35L
PHF12
FBXO48
APLF
ASIC3
SLC4A2
CDK5
VARS2
GTF2H4
EIF1B
ZNF56
RRP36
MEA1
KLHDC3
DUS3L
SYMPK
FOXA3
PRR22
PRCC
NT5C3A
MPI
GORASP2
PIK3R2
ZNF268
ZSWIM9
LIG1
OSCAR
NDUFA3
APEH
REXO1
CHMP5
BAG1
ZSCAN22
ZW10
CLDN25
PA2G4
KPTN
ST3GAL2
ST20-MTHFS
ZNF180
ATP6V1FNB
ATP6V1F
TMEM208
LRRC29
DNAJB12
UPK3BL1
CEP128
RETSAT
CALCOCO1
C12orf43
STXBP3
ZBTB22
TAPBP
DAXX
FZR1
SMIM40
DOHH
CNPY2
GSK3A
SAMHD1
SLC39A1
CREB3L4
CRTC2
SRRM2
CFAP20
ZCCHC8
NEURL4
ACAP1
SYNGR4
N4BP2L2
ZNF133
ZNF227
ETFDH
C4orf46
ABLIM2
PRRG2
NOSIP
BTRC
TBC1D31
TSPAN17
EPRS1
SCGB1C1
ODF3
PEMT
GATB
ACP6
AHCY
LAT
SPNS1
CDC6
SERF2
SERINC4
HYPK
SMPD3
RPGRIP1L
FTO
EIF1AD
CST6
BANF1
MPHOSPH10
MCEE
NSFL1C
POLR2E
GPX4
PGM2L1
PI4KB
ADCK1
C1orf159
ZNF408
ARHGAP1
FOXP4
DOP1B
PKD1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
NOP16
HIGD2A
HEXIM2
RNASEH1
PANK3
ZNF500
TMEM139
CASP2
CNIH4
RPS5
CNIH1
DNAJC16
CASP9
CNEP1R1
LINS1
ASB7
ZNF530
UCN2
PFKFB4
ZNF557
UBR2
TMEM191C
PRSS8
PRSS36
ZDHHC16
EXOSC1
RBBP5
WBP1
INO80B
TMEM59
PRKCSH
CCDC151
MFN2
SGPP1
SDCCAG8
CEP170
TSSC4
U2SURP
C1orf74
NPRL2
CYB561D2
TMEM115
BARD1
OR10P1
ZNF7
TMEM201
CCDC59
SPHK2
THOC3
RPL18
FAM83E
GAPVD1
HAUS6
ZNF446
GTF2IRD2B
ABCF3
ZNF324
KIAA0895L
ELMO3
EXOC3L1
E2F4
DCTN1
ITGB3BP
EFCAB7
BANP
NOXO1
TBL3
RPS2
RNF151
FNTB
FBXO46
ZNF547
TRAPPC2B
DNAJC28
SMIM12
PPP4R3B
SAMD1
C19orf67
ZC3H3
MISP3
STK25
ZFP90
PLTP
CYB561D1
RTN3
ATL3
USP35
KCTD21
CACTIN
ZNF546
SLC35B1
RPL13A
RPS11
TMEM199
SEBOX
POLDIP2
MAP2K7
ZNF84
NACA
ESCO2
USP34
RBIS
SNAPC3
FAM98A
PELI1
ZMAT5
UQCR10
INTS9
HMBOX1
WDPCP
MDH1
ENDOG
KBTBD6
UTP6
SNAPIN
CLDN6
THOC6
HCFC1R1
TNFRSF12A
SKP2
LMBRD2
CARD6
RPL37
MZF1
DGAT1
ERICH4
DMAC2
SCRT1
RECQL4
LRRC14
RIC8A
BET1L
GPBAR1
PNKD
AAMP
MFSD3
GPT
PLAUR
SSBP1
SNX17
EIF2B4
ZNF513
BNIP1
TSC22D4
NYAP1
BIRC6
FBXO9
CILK1
CDC27
EIF4B
CCAR2
C8orf58
ZNF605
SEC14L1
FAM220A
SYNCRIP
CNOT1
CORO7-PAM16
CORO7
DNAJA3
RPP40
CCDC150
DDX56
TMED4
PLEC
CLPP
TPR
ODR4
CCNB1IP1
PARP2
FAM168A
CTDP1
DIXDC1
CRYAB
C11orf52
CLPX
ATR
ZNF25
BUB1B
ICE1
PAK2
INVS
ERP44
CEP162
TOP1
EIF2D
FEM1B
RNGTT
RPL26
KRBA2
RAB5A
EFHB
KIFAP3
TFB2M
CNST
YTHDF1
ZNF444
LMOD1
TIMM17A
KANK2
LYSMD3
ZNF134
RPL27
IFI35
TOR1AIP2
TOR1AIP1
TMEM68
TGS1
NDUFB8
HIF1AN
VCPIP1
C8orf44-SGK3
PLEKHO2
LARS1
KMT5A
SETMAR
NDUFV1
LRRC37A3
WWOX
ARHGAP9
MARS1
GTF2B
POLR3F
DZANK1
NDE1
UMODL1
MARF1
RAB1B
ATP6V0D1
AGRP
CYP20A1
ZNF14
SDE2
AFG3L2
MAMSTR
AURKAIP1
RMND1
ARMT1
MRPL15
CC2D1B
TRIP4
PCLAF
SLC33A1
TMEM18
COG2
MAPK1
TSNAX
RIC8B
EIF1
RPP14
HTD2
AKR1A1
SNRNP70
SLC24A1
INTS14
ZNF383
ZNF585B
ZNF576
IRGQ
DUOXA1
DUOXA2
DUOX2
CTU1
CIBAR2
SEH1L
SCAND1
RALBP1
NMNAT1
LZIC
MTRES1
C8orf76
RAB6A
DHX9
RTTN
PRPSAP1
MEMO1
SIVA1
PUM3
CEP350
NAA35
STRN
FDXR
POLR3H
ZMPSTE24
TMCO2
RAB18
TSGA10
C2orf15
DHX8
CNOT4
UBFD1
EARS2
SLC25A11
RNF167
PFN1
GP1BA
VKORC1
RPS3A
PPRC1
SEC61A2
NMT1
DCAKD
PRSS53
CCNT2
SUFU
ACTR1A
IQCB1
EAF2
SPG21
CCL5
DCP1A
PHB
EMILIN1
OST4
KHK
COPS7A
ZNF497
A1BG
PLD3
C19orf47
RPL18A
TPGS1
RAB5C
LONP1
CATSPERD
LIMK2
ZNF764
SAYSD1
MZT1
BORA
SLC35E2A
ZNF416
PLK3
TCTEX1D4
BTBD19
ZIK1
CCAR1
ZNF816-ZNF321P
ZNF816
AP2M1
WDR54
C2orf81
SARS2
MRPS12
POLD1
TRUB2
COQ4
NR1H2
SLC23A3
AMBRA1
SLC10A7
SPAG4
C5AR2
NHEJ1
STK11IP
SLC5A6
CAD
ATRAID
DHX34
RCE1
FAM228B
TP53I3
SF3B6
MRPL34
ABHD8
SCGB1C2
NOL11
C19orf48
DDA1
EYA3
ZNF586
PARD6B
SAC3D1
TIGD2
ATP8B3
ZNF189
MRPL50
TDRD9
ATP5MPL
SOCS5
GPD1
COX14
RNF207
RPL22
KLHDC10
FEM1A
ZNF773
STOML2
PIGO
TESK1
KIFC1
SRMS
PTK6
CRELD2
ALG12
DRG2
BMS1
PIP4P1
TSNAXIP1
OSGEP
APEX1
CCDC183
SH3GLB2
PGRMC2
AP1M1
TMEM141
MIGA2
RANBP10
DTWD2
SERBP1
ASNSD1
ASDURF
PTPN4
TVP23B
NUDCD1
ZNF140
SH2D3A
VAV1
LOC100289561
SLC25A23
CRB3
MRPL42
EIF3C
TARBP2
NPFF
MAP3K12
RPA2
SPDYE6
FBXL19
GABARAP
PHF23
DVL2
EIF3CL
CCL25
PUM1
HMGB1
USPL1
ZNF585A
IBA57
GGT6
MYBBP1A
AGA
MYBL1
UMPS
TRMT1L
SWT1
SUCO
SMIM13
MFSD8
ABHD18
STAG3
GPC2
PCM1
PSMC5
FTSJ3
GAL3ST4
PABPC1
RABL2A
LHPP
COPS4
CDK11A
BORCS5
MANSC1
NME1-NME2
NME1
TLCD1
NEK8
ELAC2
EXD1
CHP1
ZNF260
RPL23A
RAB34
PROCA1
TSTD2
NCBP1
RAB8A
RALGAPA2
CPPED1
MARK2
CALML6
ASB6
TMEM52
CRK
CALR3
C19orf44
LYPD3
TBC1D13
C1QTNF6
TSACC
PSMD11
VPS26C
NPAS1
FAM185A
CCT3
POLR2J3
RPTOR
HBS1L
WDFY2
PDHX
APIP
SRPRB
TMEM205
CCDC159
RAB3D
ADAP1
ZFP1
PLPPR2
SUGP1
MAU2
PAIP2
FARP2
SART1
NDUFS4
ZNF324B
ART1
MRPS31
MRPL38
TRIM65
RANBP3
DRG1
MYD88
ACAA1
ADCK5
TXNL4B
DHX38
SNRPD1
SLC7A6OS
PRMT7
CSNK1A1
TMED10
EEF1G
TMEM242
HACL1
BTD
MIB1
SHBG
FXR2
ZNF527
GBA
RAD50
DFFB
CEP104
ABI1
FBXL12
FDXACB1
C11orf1
ALG9
UBL5
XAB2
STXBP2
PCP2
TMED1
CBR4
CDK5RAP3
ASCC2
ZNF736
PFDN4
RIDA
POP1
SLC39A13
UBE2B
CDKL3
SLC35B4
ELMOD2
MEIOSIN
ZNF573
SENP2
MAN1B1
ZSCAN32
ZNF174
SNX1
CIAO2A
TTC9C
HNRNPUL2
CARNMT1
PLEKHM3
ZNF461
RSRP1
SYF2
LARGE2
PEX16
TMEM79
SMG5
C6orf47
APOM
IPO11
DIMT1
GPANK1
CSNK2B
LY6G5B
LUC7L2
FMC1-LUC7L2
FMC1
PDCD2
DNM1L
CCNI
RDH12
LMBRD1
RDH11
MIA3
PLCD1
OS9
CCNB1
NIFK
CBWD5
KDM8
RRP9
PARP3
TIGD4
ARFIP1
BCL10
SMPD1
ZNF350
SKIV2L
NELFE
SUPT5H
RPS16
FAM177A1
CEP131
SLC16A11
SLC16A13
PTX4
TELO2
TBC1D30
PPP1R35
ZCWPW1
MEPCE
CCT2
GNS
SF3B5
CIPC
TRAPPC3
MAP7D1
YIF1B
KCNK6
RPS7
FAM71E1
B9D1
EMC10
MFAP4
MAPK7
AHCTF1
TMUB2
GTF2H5
PARK7
RWDD1
LZTR1
VHL
ZNFX1
SHISA5
LMF1
TREX1
KCNJ15
ZWINT
SMYD3
THEM4
ZNF550
BRSK2
FRG2
LDHD
OBSCN
MKLN1
KRBA1
SMCO1
DBNDD2
GCNT7
FAM209A
COL23A1
LOC102724770
DGCR6
YPEL3
TBX6
TSKU
ATP5F1B
TATDN2
F2RL3
ZNF436
WDR33
PDP1
MSH3
DHFR
CYB5R4
AADACL4
ZNHIT6
MTRNR2L2
BSDC1
UBE2F
COX6A1
EIF4A3
CHIT1
CPT2
THUMPD1
ZNF708
MTRNR2L8
SLC28A2
UQCRC1
DCTN6
MAMDC2
MBOAT4
TMEM89
IRAK2
ZBTB8B
SLC30A7
EXTL2
ZNF562
GTPBP6
DUSP6
ZNF433
ZSCAN31
EIF4EBP1
FAM153B
METTL8
DEGS2
PER3
DIP2B
DCAF17
MID2
TEAD2
DKKL1
SNCG
MMRN2
GTPBP4
FGD3
ZSCAN30
GLT6D1
BPIFB3
MANEA
TBC1D22A
TTLL1
RHOT1
PDE11A
CTAG1B
CTAG1A
FAM184A
CDCA7
ZNF3
IER3IP1
CNGA1
LMLN
IQCG
HACD2
ZNF24
ELAC1
SUMO3
ZNF792
COQ9
CIAPIN1
COMT
PEX7
ZNF555
PTGER2
ZBTB26
RABGAP1
TTC7B
GRAMD4
RGS18
TMEM229B
PRDX6
BTBD8
PADI4
FEM1C
SNX11
CBX1
TXNRD2
PPIG
MAP3K4
FAM234B
B4GALNT4
CCL24
ZNF572
COL18A1
APOC3
APOA1
CRP
FAM227B
DTWD1
NUF2
SPATA33
SLC27A5
FAM193B
GPR35
ZNF143
APOBEC3B
AFAP1
BCAR3
LGALS12
ZNF426
CD2
ADAM21
ZNF341
KAT6B
PLAAT5
ARHGAP39
PAXBP1
MTF2
TLR2
FGL2
C2orf66
SNX20
ZNF514
BCR
ZNF117
ZNF761
VPS13D
RGS21
LEP
SAP130
TSPAN5
DMAP1
MRPS16
PIP
NOX5
IFI6
CYP2C9
SAMD4B
GMFG
MINDY3
EDF1
PRRT1B
OR4K17
ACY3
C2orf88
ZNF132
MON2
RPL39L