ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150666 | U2OS
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◣ SRX150666: U2OS

◢ TRIM28: STRING

GTPBP6
BRSK2
MAPRE2
MTRNR2L8
ITGB3BP
EFCAB7
BSDC1
KCNJ15
CRLF2
ZNF436
GALNT1
SUPT7L
SLC4A1AP
AADACL4
ATF7IP
KDM3A
WEE1
OBSCN
ZNF408
ARHGAP1
GABPB2
MLLT11
NBPF1
LCA5
SAMD14
RCAN1
RPL27
IFI35
C19orf18
PRKACB
COL4A6
COL4A5
MSH3
DHFR
MTRNR2L2
L2HGDH
DMAC2L
SLC2A8
SF3A3
FGD3
IRF6
LGALS3BP
COX16
TMEM79
SMG5
TESK2
MMACHC
CCDC163
CDIPT
SRPRB
PPP6R1
KRBA1
COPS4
PRSS41
NDUFB3
FAM126B
F2RL3
PIH1D2
NKAPD1
RBBP5
NOX5
FCGR1A
EVPL
HDAC8
PAQR8
NME1-NME2
NME1
AURKAIP1
COX7A2
APOC3
APOA1
MRPL55
PRPSAP1
INTS5
GANAB
MTF2
GJC1
INKA2
DDX20
IKZF3
RPS26
ARID1A
ZWINT
MTA2
TUT1
ZNF134
LY6K
DNAJC16
CASP9
ZBTB26
RABGAP1
ARTN
KDM5C
PLA2G2A
MED18
MAMDC2
EIF2S1
ATP6V1D
TBL1X
DUX4
RPS7
CLPTM1
APOC2
CALCRL
SMG8
SMTN
DEFA1B
DEFA1
SLC33A1
ARHGAP39
TPM3
CCL20
C1orf189
STAT3
AHCYL1
ZNF555
PAXBP1
SELENOH
STC1
WBP1
INO80B
LIMK1
ZNF426
EPHA2
CCNI
SMYD3
RGPD2
RGPD1
SERPIND1
ITFG2
SLFN12
CDK12
MED1
HAX1
ZNF226
RFFL
CELSR1
CYB5R4
PLK3
TCTEX1D4
BTBD19
ABR
DHX16
RAB33A
AIFM1
ZNF514
GDNF
SAMD7
SCTR
DYNC1H1
GLT6D1
BAIAP2
MAP3K14
DUSP6
ZNF571
ZNF540
GPC6
WDR83OS
WDR83
MAN2B1
TEX46
KDM1A
UBB
TNFRSF1B
ZNHIT6
RMND1
ARMT1
SSBP1
EIF3F
RPIA
ZDHHC6
VTI1A
IGFL4
THG1L
GTPBP3
ANO8
MID2
ARMCX5-GPRASP2
ARMCX5
KANK4
ELFN2
CELF1
PSMB7
ABRACL
RAG2
IFTAP
TSKU
RBM33
VARS2
GTF2H4
ZMPSTE24
TMCO2
UTP3
MT1HL1
ISY1-RAB43
ISY1
STK40
CCDC174
CANT1
C1QTNF1
TIMP4
MTBP
MRPL13
LPIN1
ARHGEF2
PPIL3
NIF3L1
NPR1
ILF2
BCL10
NKX1-1
LRIG2
SNX27
RCAN2
COL18A1
RPH3AL
AKIRIN1
NOL12
LY6L
ALG14
VSIG1
AGFG1
DHRS3
ZNF331
PLK2
AP1G1
SLCO1A2
FGFBP3
NID1
KIAA0754
ZSCAN32
ZNF174
RNF125
ZBTB33
GNB1
SLC5A1
REXO4
ADAMTS13
PACSIN2
C1orf174
UQCRC2
KAZN
MICALL1
GBA
COL23A1
YWHAQ
AEBP2
PLEKHG1
PPIP5K2
GIN1
TTC26
ZNF383
ZNF585B
TRIM5
PPRC1
TRIM22
RAD51AP1
C12orf4
EDF1
ZW10
CLDN25
DUSP14
RPA2
ZBED9
IL17F
ZNF56
TTC39C
GPS2
EIF5A
DNAJC25-GNG10
DNAJC25
RRAGB
ZNF790
ZNF594
NRARP
TRUB2
COQ4
MRPS23
EFHD1
CITED4
TFB1M
VTA1
NMBR
TMEM101
DNAJB12
DDX41
DOK3
DLX4
PIKFYVE
ASAP3
RDH12
TMEM247
FAM124B
FAAP20
ZBTB25
ZBTB1
CSNK1E
RHOD
ZNF165
OR1F12
ZC3HAV1
PCYT1A
PM20D2
CORT
CELA2A
NEMF
PISD
TRMO
YPEL3
TBX6
TMEM242
SLC25A53
FAM199X
OPN1MW3
OPN1MW2
OPN1MW
MPP1
THEM4
FRRS1
TTYH2
RPL38
RHOQ
ATP6V1E2
IFNL4
IFNL2
PRRT1B
MITD1
USP21
ARID3B
UFC1
WDR33
RERE
TFPT
PRPF31
HEXB
TAGLN2
HAPLN2
LSG1
TMEM72
ANKRD35
NCOA7
RNF207
RPL22
ARL15
ARMC1
RPL11
CTPS2
TBC1D19
ZBTB38
APOLD1
SIN3B
BNIP1
TIMM10
SMTNL1
TLE4
MED11
ZMYND15
CXCL16
SCARB1
B4GALT3
AK2
KAT6B
SGPP1
KSR1
PSAP
PDE12
IFI6
TNPO3
UBE3B
C2orf66
GTF3C3
NOTCH2
GYG2
MAST2
ZNF454
DDX47
FAM89A
RABGAP1L
LRP6
HEATR1
SPINDOC
PES1
STX1A
TM2D1
C5AR1
TMEM262
PARP15
PRRC2B
PSMD3
PARP9
DTX3L
KANSL3
FER1L5
C3AR1
TOMM40
CASP10
VPS52
RPS18
B3GALT4
NEK2
ECPAS
LIMS4
LIMS3
ZNF577
CD14
ZNF764
ZRANB2
ZNF688
PRSS21
CTSK
ADRA1A
BZW2
SHOC2
BBIP1
BAHCC1
TEFM
BORCS6
SLC35B1
FANCC
RPS24
POLR3A
ZNF251
PTPRH
ACY3
HEMK1
C3orf18
RUVBL1
PCNP
TNFRSF1A
SFRP2
RAB30
RBM25
ENKUR
PEX3
ADAT2
SCMH1
SNX17
EIF2B4
ZNF513
ZNF704
ATP5MC2
ANO9
ZNF461
PTDSS2
ADAT1
TIMP3
KRT19
SULT1C2
UFD1
CDC45
GTPBP4
DPP9
TTI2
TIMM22
RPRD1A
ZNF750
FAM81B
VPS35L
TRAFD1
TAAR5
S100A11
EIF3E
AASDH
CENPP
AAAS
NOL8
GNA13
COIL
GPN2
SLC39A9
ERH
GPATCH3
PAFAH2
OSBPL9
SPHK2
RPL18
FAM83E
PRDM1
SMIM12
SNRPB
NR1H3
ACP2
CEP120
ZNF510
ZNF335
CLASP2
TAF12
NEURL4
ACAP1
SLC27A5
GPR35
TM9SF1
IPO4
ZBTB45
EPRS1
HEBP2
TTC14
LIG3
ARMC7
TBC1D9
FAM184A
TMEM125
LIMS1
MTR
PHC2
ZNF585A
DDX42
CCDC47
PYGB
PHF5A
ACO2
CHMP7
NECTIN4
CCNC
SNRPD1
TMCO3
DCUN1D2
ZNF501
ZNF502
B3GNTL1
LMBR1
RCC2
TTLL2
SESN1
CEP57L1
GADD45A
ZXDC
IL22RA2
DDX18
ANKRD13C
NARS2
YJU2
FBXW7
ZNF221
AKR1A1
AMHR2
MDM4
CCDC97
PIGL
NCOR1
TRAPPC8
ISLR
CDK5RAP1
ABL1
TMEM259
CNN2
CMSS1
SLC25A33
GTF2B
HECTD4
PREPL
CAMKMT
CDKN1A
PXT1
KCTD20
DMAP1
IMP4
CCDC115
UBAC1
TIMM9
KIAA0586
OCIAD2
KIF25
TRPV2
PLEKHM3
FAM222B
SASH1
MROH7
GYPC
ALG10B
DHX8
PDSS2
KDELR1
GRIN2D
FRA10AC1
SAR1B
SOD2
POMGNT1
DYNLRB2
LURAP1
EFCAB14
JMJD1C
CLEC4M
COMMD2
CD209
CHAD
ID2
MAN1C1
CREM
ZNF484
SLITRK5
CLDN7
MTHFD1L
DAPK3
MRPS15
IPO13
DBF4B
ZNF793
NR1I2
GCNT7
FAM209A
MED23
ENPP3
CALD1
WSCD1
CNGA1
ZNF891
ZNF10
FAF1
NIPAL1
PPIH
USO1
CDKN2C
PDE10A
ZNF550
PTPRN2
EXOC2
SMAD5
LRRFIP1
CLN3
APOBR
ST20-MTHFS
TTC32
PPP1R11
POLR1H
ZNF260
SLC22A23
APOL6
ZBTB40
POLG
RBL1
GMEB2
ZNF2
PC
ZSCAN4
SEC16B
NUF2
FDXACB1
C11orf1
ALG9
SRSF1
KIAA0319
TUFT1
MTMR11
IFITM3
ANOS1
ATG4C
DNAJB4
KAT7
FUBP1
PTP4A1
SLC1A3
CCDC59
KDM8
ANKRD17
BNIP5
MYO1B
PJA1
MOB4
CPD
TNFRSF10B
KDM6B
PFDN1
UQCRH
LRRC41
ABLIM1
GLIPR1L2
LSM4
NEK10
SH2D5
SGMS2
TMEM128
GALM
GPC1
CCKAR
BANP
ZNF662
KIF2C
MNAT1
DHRS2
LYPLA2
GALE
SMARCD1
ERICH4
DMAC2
SNX12
CCNY
SF3B5
LONRF3
CDC73
TM9SF4
RPL26
KRBA2
GLRX2
RMI1
HNRNPK
NFYC
BIK
TMEM167B
ARHGEF39
SIT1
CCDC107
ZNF806
INTS4
C19orf48
LIMA1
MRPL1
KRR1
PKN2
RHOC
MED16
ZNF230
VMO1
PSMB6
GLTPD2
PLCD3
ACBD4
EIF3D
CZIB
NYX
RTTN
INTS2
DNM2
LACTBL1
POLD1
C11orf49
PCBP2
NR1H2
SCP2
SH2B1
CSTF2T
ZNF302
SLCO4A1
IRF9
KPNA2
LCT
RFXANK
BORCS8
AMD1
CDK19
HIRIP3
DRD4
STBD1
SF3A1
CCDC157
RPL37A
ADGRF1
CDHR5
SCT
MRPS33
OAZ3
MRPL9
PRRG2
NOSIP
F2RL1
GOSR1
PSMD9
HPD
PCDH9
CORO1C
GPR1
CCDC130
TTLL12
CALCB
EAPP
SNIP1
DNALI1
UIMC1
OSBPL8
PDE7B
ZNHIT3
SUGCT
MPLKIP
UBE2L3
RIMBP3C
RIMBP3B
ARL14EP
MVB12A
NFATC3
ZBTB8OS
RBBP4
TIMM50
NRDE2
SREK1IP1
CWC27
MIDEAS
PHB2
USP54
CDC5L
TNFAIP1
IFT20
PEAK1
HMG20A
INSYN2B
RCN1
TACC1
KIF5C
CDH1
SUGP1
MAU2
ATP5F1B
CYB561D1
ATXN7L2
EMILIN1
OST4
KHK
POC1B-GALNT4
GALNT4
NME7
BLZF1
JUN
RRP12
TIMP2
RTL9
CHST4
YBX3
ASB5
NSA2
GFM2
RSPH3
CDK14
PRDM4
PNPLA5
DMP1
ZNF613
ZNF791
ZNF490
ZBTB7B
NCF4
RDX
LENEP
WDPCP
MDH1
TSTD1
ZMYM6
TMEM127
CIAO1
USF1
MAGEA11
TANC1
KRT31
DND1
WDR55
CORO2A
SLC19A1
RANBP3
PRKCI
KRT10
BST2
ZNFX1
WDR11
NOP16
HIGD2A
CRADD
SIPA1L2
MAP7D2
NFAM1
BRF2
ZNF350
MRPS18C
HELQ
AAR2
SCYL3
UBQLN1
PRKG1
CYB5R2
PSMG4
COASY
HSD17B1
MLX
WTAP
KIF3B
AJUBA
DNAAF1
HSDL1
INO80C
TYSND1
TMED1
RGPD6
S100A13
SPRR2F
KCNH4
S100A1
CHTOP
ADAMTS17
HCRT
DNAL4
SUMO3
WDR36
FHL3
UTP11
ZNF48
WASF2
MYLPF
TBC1D10B
SEPTIN1
ZSCAN30
NRL
DCAF11
DCT
SLC39A6
SRA1
SLC35A4
APBB3
CES3
HAUS4
CD2BP2
RUFY3
SLC25A44
MYO1H
PFKP
TRAF4
TEF
BORCS7
RMND5A
ZNF518A
TMEM30A
ZNF570
ZNF569
FBXO46
NEDD4L
AGTPBP1
CEP162
STAC2
C2CD4D
GDF6
LGI1
THEM5
ZNF572
STARD10
IARS2
BPNT1
CAND1
QRICH1
SIRT4
PTAFR
LMNA
PAFAH1B1
TCIM
PTPRK
TEKT3
C8orf37
LSM5
AVL9
ATP5MC3
RIPPLY2
UBQLN4
LAMTOR2
GPX1
LRRC37B
LMNTD1
SGIP1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
LGALS8
CTR9
TCEANC
RAB42
CNPY2
ERVFRD-1
CPN2
RCC1
SLC7A11
MBNL2
NHLH1
SEPHS2
TBX18
EIF4A3
BCAR3
LTA4H
NEK4
ITIH1
TRMT1
NACC1
MAP2K3
SPOCK2
RPAIN
NUP88
ASXL3
LGI2
CCNT1
TEKT2
ADPRS
TMBIM1
STAT6
KLF3
ACTR6
C12orf40
ABCD2
GLCE
PROC
TTC9B
CCNP
STRA6
MTRNR2L10
TBC1D22A
PSMD8
MRPL48