ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457587 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◣ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KRBA1
DUX4
SMYD3
OBSCN
LDHD
MKLN1
MTRNR2L1
SUMO3
BSDC1
PPIG
ZBTB26
RABGAP1
DCTN6
MBOAT4
ZSCAN31
BRSK2
TATDN2
ZWINT
ZNF3
COL18A1
BCR
TSKU
IL36A
UBE2F
PRAME
KAT6B
TEAD2
DKKL1
EXOC3
SARS2
MRPS12
AADACL4
GTPBP4
SNAP29
PI4KA
LUC7L2
FMC1-LUC7L2
FMC1
RBM33
COX6A1
ZNF572
ZNF436
SAMD14
SAMD4B
GMFG
ATP1A1
PRRT1B
ART1
ADCY3
YTHDC2
FRG2C
MROH7
GTPBP6
ZSCAN32
ZNF174
GUCA1B
ZNF514
TMEM41A
FKBP5
ST20-MTHFS
ZNF433
KCNJ15
UQCRC1
TMEM89
PDIA4
UBE2H
SAE1
YPEL3
TBX6
EIF4EBP1
FN3K
ATP5F1B
C1orf167
CCDC130
FOXN1
SNX11
CBX1
PPIL2
CD2
ZNF550
ZNF562
TMEM43
CHCHD4
GJC3
ELAC1
PADI4
RSF1
AAMDC
ST6GAL1
POM121L2
NARS2
SIGLEC14
PRELID3B
SNIP1
DNALI1
LZTR1
ZNF662
RBBP5
LMTK2
LGALS12
PLAAT5
AURKAIP1
ZFP30
SERPIND1
CPT2
ZNF134
CABP5
ZNF623
ZSCAN29
TUBGCP4
ENG
NUP214
COMT
TXNRD2
ANGEL2
ITGB3BP
EFCAB7
TRUB2
COQ4
MRPL20
ANKRD65
GCNT7
FAM209A
TOP3B
F2RL3
CHIT1
LBP
DEGS2
GRAMD4
THUMPD1
YY1AP1
DAP3
GFI1B
TSC1
FAAH
VARS2
GTF2H4
ZNF263
HTRA2
DQX1
IFI6
SAMD7
POLR2E
GPX4
SELENBP1
MRPL40
HIRA
NDUFS7
ZNF317
CRKL
TRMT2A
RANBP1
RBL1
JMJD1C
REEP3
LUC7L
FAM234A
MAPK1
ZNF165
CLK4
GPRC5C
NBPF1
CEP85
TRAF4
TLCD1
NEK8
BTBD8
CYC1
CHST3
GPAA1
POLR2J3
EXOSC4
DIP2B
ZNHIT6
GLRA1
MARCHF2
ZNF222
SLC35E2A
PRPH2
TTC32
SMIM12
AMD1
CDK19
METTL7A
STAU1
RCCD1
EIF3L
ANKRD54
ZNF117
ERV3-1-ZNF117
ERV3-1
TGIF1
ZNF761
C4B_2
C4B
TNXB
LONRF2
PCBP2
BAX
ZNF75D
LOC110384692
C4A
SLC1A7
MED23
ENPP3
SEPTIN5
GP1BB
ZNF408
ARHGAP1
PRKAR2B
ZNF501
ZNF502
ARHGAP39
HLA-C
FOXK2
ICAM5
ZGLP1
FAM153B
RHOT1
FEM1C
TAF4
PIH1D2
NKAPD1
UBE2L3
TMEM42
TXN2
GORASP2
RPL26L1
PIGQ
IL22RA2
IMMP2L
LLPH
PHF19
POM121
TRIM52
ZNF555
MYOG
TNPO3
AGPAT1
SMIM13
FAM184A
APOBEC3B
SPIDR
ZNF426
CPA2
LOC102724265
ADCY10
HDHD5
UFD1
CDC45
SULT2A1
COPS4
NRSN2
ZBTB8B
ZNF324B
SSBP1
ZNF132
VPS13D
TMEM259
CNN2
PPM1F
TRANK1
PDXK
SF3A3
ZSCAN25
ADAR
SFSWAP
CCDC116
SDF2L1
WASHC2C
KAT5
RNASEH2C
SEC22B
STX16
GSC2
C9orf16
SNCG
MMRN2
SGPP1
RNF187
IER3IP1
C2orf88
RTP5
EIF1AD
CST6
BANF1
GYG2
EIF4A3
PHRF1
FZD1
RPS29
ZNF594
PAFAH2
DNAJB12
MACROD1
RIMBP3C
RIMBP3B
MAPRE2
OPN1SW
CCDC136
SUPT7L
SLC4A1AP
TTI2
PPP5D1
CALM3
TANGO2
ARVCF
NDUFS6
MRPL36
GCFC2
TAS1R1
NOL9
NME1-NME2
NME1
RBM26
THAP7
ZNF708
MAN2C1
TPGS1
PDP1
TTC26
ZNF438
SNRPE
ZNF440
ZNF491
GLIS2
GNB2
MRPL42
TTLL1
ZMPSTE24
TMCO2
ZNF394
UNC93B1
ALDH3B1
LINGO3
NOS3
TMEM44
PCP4L1
TBC1D22A
GRPEL2
RP9
ASCC2
METTL8
DCAF17
IGFALS
SEC14L2
RNF215
SUPV3L1
PRDX6
TFPT
PRPF31
SLC28A2
EIF2D
MOGAT3
ARTN
PACSIN1
SPACA3
C6orf47
APOM
BAG6
RELN
ZNF878
CDCA7
SNX20
IL21R
GDPD5
BCL7B
PTPA
CRAT
IFT88
NRARP
SPSB1
RXRA
TMEM191C
SLC24A1
INTS14
SUB1
C11orf96
GABPB2
HIP1
WDR47
GTF3C4
DDX31
MAD2L2
TRIM63
DRAXIN
ZNF627
KRTAP10-7
CCNI
ASIC3
KRTAP10-6
PDZK1IP1
SPATA45
TMEM242
SELENOH
PDCD6IP
CSAD
ZNF740
SAMD1
C19orf67
CMC2
CENPN
PGBD2
TRMT11
PRPF3
LCN15
AADACL2
ZFAND6
RSAD2
C1orf158
PLD3
C19orf47
SLC7A6
PER3
ZNF792
MRPS16
TMEM140
MIR1-1HG
ST3GAL5
SLC25A33
VAPB
SH3GL1
CHAF1A
CLIC3
MS4A6A
RGL2
PFDN6
PAXX
LCNL1
MPZL1
NUB1
ZC3HC1
ZW10
CLDN25
POLE4
LOC100289561
KCTD9
CDCA2
INPP5B
YWHAQ
DSTYK
IQSEC1
AURKB
PKMYT1
SLC4A1
DBNDD2
NT5C3A
HLA-E
DGKD
YPEL1
CTAG1B
CTAG1A
POLG
TPR
ODR4
AHCYL2
ULK1
MED15
GALNT1
RERE
LARP1
TAS2R41
OR1F12
CRBN
SYNJ2
RHCE
FRG2
PRIM2
TDRD7
FAM25E
SLC27A4
ZCCHC7
FAM71E1
ACTL8
ACYP2
DIP2A
DCLRE1B
AP4B1
PDE2A
RSRP1
HSPBP1
BRSK1
ST3GAL4
APOC3
APOA1
MRPS33
ANKRD36C
COL1A1
SETDB1
CMIP
CCDC188
ZFYVE28
SYT3
SAP130
NME4
DECR2
UTP3
AARS2
RPS15
GPR3
CD164L2
ZNF74
ARHGEF4
ZSCAN30
MAP3K4
B4GALNT4
SMU1
CDIPT
TMEM62
ZNF554
CACNG1
ZNF529
TSNAX
C7orf25
IDUA
SLC26A1
TMEM191B
NUF2
BTN3A3
REXO4
ADAMTS13
PPP6R1
PLK3
TCTEX1D4
BTBD19
CDT1
EIF1B
APRT
UBAP2L
C1orf43
NFYC
JSRP1
DNAJC14
OAZ1
ZNFX1
SLC30A7
EXTL2
RPS7
VTA1
NMBR
HUS1
PPARGC1B
DIRAS1
UCP3
FGFRL1
HFE
MMGT1
WDR33
ZNF614
RPS26
NUP205
TOR1A
OGDH
GSTA4
NET1
ATG9B
TMEM216
ABCB8
LMNB2
TUBAL3
TMEM74B
GAGE2C
GAGE2B
GAGE2A
GAGE1
PEX7
ZNF143
C6orf89
SEC24C
RTL10
GNB1L
MAGOH
MTHFD2L
CREB3L3
ZNF280A
PARK7
MAP1LC3B2
GJD3
P2RX6
FAM220A
FAM193B
RGS21
N4BP2L2
LMAN2
RGS14
THRA
MED24
IL15RA
FAM160B2
EPO
LMLN
IQCG
CCDC88A
QRICH1
NDUFA6
CNTRL
C5
IREB2
SPRING1
RNFT2
CYP17A1
WDR43
ZNF441
TCP11L1
NRCAM
SLC25A24
GSTM5
FAM207A
LTN1
ATAD2
E2F2
CEP164
KCNH1
PLAU
ZSCAN21
PAXBP1
BAIAP2
KRTAP10-9
RABIF
RNF216
KIR3DL3
KIR2DS5
KIR2DS3
SYS1
FRG1
GOSR2
MST1
ZNF282
TMEM219
RBBP9
KDM3A
CCDC59
CYB561D1
ATXN7L2
PARP16
RBM28
RIF1
CAPN11
HNRNPH1
TRAF3IP3
EHD1
PRKCSH
CCDC151
NBEAL2
CCDC12
IL4I1
INHBE
GLI1
ZNF598
TMEM240
TLR2
NEMF
SERPINB1
SUGCT
MPLKIP
DYNC2I1
PPP6R3
ZNF808
CD53
CWC22
TMEM229B
TAS2R39
TRIP11
INO80C
WBP1
INO80B
COPS6
USP48
DHX8
RPS10-NUDT3
RPS10
HSPG2
VAC14
VMAC
NDUFA11
GPR182
PLEKHA6
TMPRSS12
SMARCD2
SCAMP2
ZBTB6
RC3H2
OR2W3
GBA
KLHL20
NECAP2
DNAJB13
SLC25A23
CRB3
TMEM128
CCDC71L
DHX40
BANP
DCAF10
SLC44A1
TNFRSF1B
MTR
ZNF585A
THOC3
RHD
DISP3
ACOX3
TRMT44
BMS1
DPH7
KLF2
SRP19
MAP2K1
NR2C2AP
NCAN
KIF3C
TM9SF1
IPO4
SMG8
ZNF300
TLE7
WWOX
PFDN5
MYG1
PLIN3
SAYSD1
ERMN
TCAIM
CARD6
RPL37
TMEM222
EFHD2
ZNF385A
MRPS15
VPS52
RPS18
B3GALT4
MARCHF7
CEP192
CNPY3
LOC388813
DDX43
DGCR8
SH2D3A
HTR3E
HIC2
TMEM101
NEU1
DHX16
RUBCN
IBA57
UFSP2
C4orf47
PRKCI
PSMC3
TUBB1
SNAP47
TMCC3
MRPS18C
HELQ
TPM1
LRP6
CLEC18C
NPIPB9
ZNF268
VARS1
LYRM2
CHMP4B
HAUS5
RAX2
MATK
TTC38
PKDREJ
ZNF212
AASDH
GIMAP8
RNF146
DBF4B
CAMK2G
PKD1
DTX4
DGCR6L
HERPUD2
VPS13B
CSNK1G2
TRIM5
GRM4
TRIM22
MADCAM1
KIF15
KIAA1143
ODF3L2
POC1B-GALNT4
GALNT4
PHF12
AGBL3
KLHL18
KIF9
DYNC2I2
SLC44A2
SMARCC1
KRTCAP3
DMAP1
RBIS
PPP1R8
SPATC1L
EEF2K
SLC6A9
LEMD2
ANKRD13D
ZFP36
FAM20B
PLEKHG2
H6PD
SSH3
FNDC3A
THEM4
NUP210L
GTF2H5
RAB3GAP2
NDUFAF1
ZNF398
ZNF425
USP21
TMBIM1
IPO13
PPOX
RBM48
PEX1
SEC61A2
SPTAN1
SPACA9
AK8
SCAMP4
ADAT3
ADAM8
TSC2
NTHL1
AXDND1
CRTC1
ZNF714
YJU2
FAM228B
TP53I3
SF3B6
PDRG1
PRPSAP1
CASS4
DDX27
HTR4
N6AMT1
AK2
CACTIN
RRP9
PARP3
ZNF649
IRAK2
MRPL55
ZNF391
CDK5RAP1
FAM180B
NDUFS3
KBTBD4
KIF22
TDG
C12orf73
ZG16
VWA7
ZDHHC12
TFEB
ZNF561
ZSCAN22
DTWD2
BRPF1
TSSC4
OVOL3
TBCB
POLR2I
UBTF
SLC45A3
C19orf48
TUBA1C
CENPP
NOL8
PDE11A
FEM1B
WDR70
NUP155
RBM45
ZNF683
PDE4A
CCDC124
TIMM50
CHMP4C
CCNL2
IL18BP
STX4
STRIP2
LY6L
MITD1
TEKT2
ADPRS
HMGN4
PDCL3
ATF7IP
LRRC59
EPB41
SH2B1
SCARB1
LEO1
ZNF558
HPR
EIF3F
NSUN4
TARBP2
NPFF
MAP3K12
PMS2
AIMP2
CGB3
CGB1
CGB2
GLT6D1
TRIP4
PCLAF
DPY19L4
POLR3B
JMJD4
TMEM79
SMG5
RAD54L
INTS4
CCDC83
MEGF8
HDAC1
ZNF564
ARNT
HCN2
KRT16
RPL27
IFI35
TESK2
MMACHC
CCDC163
SACM1L
HTR7
FUT10
POLR2J
PMF1-BGLAP
PMF1
WNT10A
CYP21A2
OR8G2P
MRPL44
ZBTB40
TIPARP
KRR1
ZRANB2
BLOC1S5
TAF1C
UPK3BL1
ADAD2
TBL2
SNX15
DLD
SKP2
LMBRD2
GLO1
ZNF358
SLC25A16
MCOLN1
COMMD4
TENT2
DGAT1
BBS1
DDX50
SCRT1
WDR4
SYNC
ANP32D
SMG7
PPIH
RBSN
PRMT3
RAP1GAP
B3GALNT2
CENPC
STAP1
WNT11
COL23A1
NBN
MED18
DIDO1
GID8
BUB1B
NRBF2
ZNF684
CYB5R4
STAM2
FAM13A
HK1
PTPRF
ANKS6
GALNT12
SPPL3