ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7030917 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◣ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DUX4
MSH3
DHFR
MTRNR2L2
MTRNR2L1
LOC102724770
DGCR6
KCNJ15
FRG2C
LRPAP1
KRBA1
EIF2D
FAM227B
DTWD1
ZNF550
ZWINT
SMCO1
COL23A1
FRG2
CNOT3
PSMD6
MTRNR2L8
BCAS4
PFDN4
MAMDC2
THEM4
POLR2J3
SGPP1
BMP7
SMARCD2
TMED9
B4GALT7
NOX5
WDR33
KMT2A
CHIT1
ADAM21
PDP1
MUC12
KDSR
STX16
SCTR
IQSEC3
SRRM3
PTPRN2
ZNF217
N4BP3
FAM151B
TPTE
FZD1
KIF5C
WWOX
SEC13
GBA
ZNF341
CHD1L
PRKAB2
NCOA3
SLC24A1
INTS14
DCLRE1B
AP4B1
GNAL
RTEL1
RAB37
MTRF1
PUS7
RINT1
BTN3A3
CTNNB1
KAT6A
AP4E1
TRIM3
TIMM10B
ARFIP2
SMG8
NOXA1
MKLN1
TIMELESS
TBX2
B4GALNT3
GTPBP4
DPY19L4
NSFL1C
TSEN15
HES1
GSTM1
PHRF1
C2orf66
IGFALS
GTF3C3
MVD
SPATA33
OAZ3
MRPL9
NFAT5
SLC39A13
ACSF3
NOTCH2NLA
COX6A1
MRPS23
CPA2
CRBN
CALM1
PREX1
LMTK2
RGS18
ATP1A1
LGR6
SCCPDH
ATXN7L1
HTR5A
TPM1
GSTM5
CFHR4
GTF2IRD2B
TTLL12
POLR3B
CLIC3
PRRC2B
OPA1
NOTCH2NLB
ANKRD36C
CRYBG1
USP32
DEGS2
RBBP5
DGKZ
USP3
NEDD9
CUX1
ART1
ZNF76
ZNF783
EIF4A3
NOTCH2NLC
CLUL1
ARPP19
RMND5B
MRPL1
ZNF398
CROT
ST20-MTHFS
F2RL3
GCNT7
FAM209A
ANGEL1
APOD
ATP6V1FNB
ATP6V1F
FAM207A
PEX3
ADAT2
SLC44A1
MKRN2OS
MKRN2
HOOK2
THUMPD1
EIF3F
GNB2
C18orf25
SSBP2
COMT
TTC7B
TXNRD2
FRA10AC1
USP30
TRIM37
BCL11B
DUXB
RBBP8NL
NME1-NME2
NME1
DSTYK
KCNH6
PPP6R1
SGCA
BRD3OS
CA4
TEX14
RAD51C
FAM153B
ZNF24
RGS21
DRAP1
C11orf68
MRPL40
HIRA
LRRC37A3
ZMYND8
ARHGEF1
CD79A
IZUMO1
EVL
CADPS
FUT1
FGF21
ARFGEF2
MFSD4A
NFYB
LRP12
EXOC2
LMNB2
TRIB1
IL21R
METTL9
FAM193B
DMXL2
FAM133B
POLR2J
PRKAG2
ADPGK
LTBP2
PPM1D
ARHGAP39
LY6L
ZNF860
OSBPL10
TSKU
TBC1D22A
DCP1A
SNRPB2
PDAP1
BUD31
AP1G1
BPTF
EPG5
SERPINB5
ATP5F1B
PRRT1B
ALG10B
PNPLA7
MRPL41
ZCCHC4
KIF22
ZG16
ZNF282
APPBP2
NARS2
INKA2
DDX20
SERPINA3
FOXK1
ZBTB8B
MRPS31
ASNS
VPS37D
CPSF1
SLC39A4
WWP1
PRDX2
RNASEH2A
ATR
CNOT6
ZNF212
C7orf26
MOCS1
DHRS13
FLOT2
SRI
LGI1
CYP2C9
RBM48
PEX1
NCAPH2
LMF2
PRELID3A
ITPK1
SDK1
GPRIN2
TBC1D19
GFI1B
TSC1
HECTD1
SKIL
UMODL1
KRTDAP
GNAS
HMGB1
USPL1
ZNF317
MAN2C1
AGK
ARHGEF12
PARD6B
PARP10
GRINA
DIPK1C
SSBP1
GET3
TTC6
FOXA1
ZNF708
IER3IP1
BANP
TRIP4
PCLAF
C3orf14
SLC19A1
CMTR2
HEATR6
CA5A
PTGER2
UTP3
ZNF609
XXYLT1
SLC37A4
ATP8B1
REXO4
ADAMTS13
ZNF205
PPP1CC
ZSCAN10
RGS9
MID2
NCBP3
MIS18BP1
RPS7
SF3A3
KANSL3
FER1L5
CYP27C1
TNFAIP2
AMER3
MON2
SOX30
USP15
DDX59
PLA2G10
NPIPA3
NPIPA2
SLC27A2
SUMO3
MUC3A
ZKSCAN2
ERVW-1
GPATCH1
ALDH5A1
OSBPL1A
LRATD2
PAM16
GPLD1
PRELID3B
BMS1
MYL12A
MYL12B
USP8
LSMEM1
STX18
ADRM1
TDG
C12orf73
VPS28
TPBGL
BCAS1
RIIAD1
CELF3
NUF2
ATAD2
FAM3C
NPIPB15
CTDSP2
PPP5D1
CALM3
RBL1
EPS15
CARD9
GPSM1
TESMIN
COLEC11
GLIPR1L2
VWA8
POFUT1
PLAGL2
ZBTB7C
KDM3B
OTUD7B
ZFAND4
CYB561D1
IL17D
AURKAIP1
DNAJC11
UCHL5
RO60
NUDCD1
RASA4B
DBNDD1
GAS8
SLC33A1
RRP15
ATMIN
TRIP6
SRRT
PPM1A
KCTD3
SCAMP5
GTPBP6
GLRA1
LSS
ANKRD40
TAF10
RRP8
ILK
ETFDH
C4orf46
LYSMD2
IQANK1
FAM83H
TMOD2
KLC1
SCARF1
RILP
NOTCH2
UPK3BL1
USP46
IMPACT
SPDYE2B
SPDYE2
TMEM121B
TBX4
DUSP6
TDP2
ACOT13
SNRPE
CDC25B
CENPB
SPEF1
DRG2
LRFN2
CELF6
CIB3
NOL11
HIPK1
ANKS6
CCDC59
DIO2
CLTB
LSM5
AVL9
NUP107
FAM102B
CEBPA
ASB6
NOM1
FECH
CSRP1
GIGYF1
DVL3
NEMF
SEC22B
ZNF425
MYO5C
VRK1
NPEPL1
HMGN1
CCDC130
KIAA1549
TSEN54
LLGL2
CASKIN2
GCLC
RASA4
ADSS1
METTL7A
RFX7
TEX9
ZC3H6
PDE8A
ATAD2B
PRSS16
C1orf53
LHX9
ST6GALNAC6
NDUFAB1
GNAI2
SLC22A23
PTPRE
PCDH8
PDE9A
CIZ1
SYT7
DNM1
MAP3K2
WDR11
MAPKAPK5
CLCC1
ZNF746
NPAS4
PIAS2
IL36B
IL36RN
BCAS3
KATNAL2
LOC100287896
LIPT2
GTF2F2
NUCKS1
ZFPM1
SAMD4B
GMFG
LUC7L2
FMC1-LUC7L2
FMC1
INTS4
MYO5B
SCAND1
ISM1
MTF2
LAMB2
DNAJC25-GNG10
DNAJC25
RP9
MYBPC3
GSAP
UBQLN4
LAMTOR2
TEX2
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
AHCYL2
ADPRHL1
SNX11
CBX1
BNIP1
PNMA3
ZNF23
SKIDA1
MLLT10
FOXP4
SMYD3
BRSK2
LDHD
OBSCN
DBNDD2
YPEL3
TBX6
TATDN2
ZNF436
ZNFX1
CYB5R4
AADACL4
ZNHIT6
BSDC1
UBE2F
CPT2
SLC28A2
UQCRC1
DCTN6
MBOAT4
TMEM89
IRAK2
SLC30A7
EXTL2
ZNF562
ZNF433
ZSCAN31
ITGB3BP
EFCAB7
EIF4EBP1
ZNF527
METTL8
PER3
DIP2B
ZSCAN32
ZNF174
DCAF17
TEAD2
DKKL1
SNCG
MMRN2
FGD3
ZSCAN30
NT5C3A
GLT6D1
BPIFB3
MANEA
TTLL1
RHOT1
PDE11A
GORASP2
CTAG1B
CTAG1A
FAM184A
CDCA7
ZNF3
CNGA1
LMLN
IQCG
ZNF134
HACD2
SARS2
MRPS12
ELAC1
ZNF792
COQ9
CIAPIN1
PEX7
ZNF555
TMEM242
ZBTB26
RABGAP1
GRAMD4
TMEM229B
PRDX6
BTBD8
PADI4
FEM1C
PPIG
MAP3K4
FAM234B
B4GALNT4
CCL24
ZNF572
COL18A1
APOC3
APOA1
CRP
SLC27A5
GPR35
ZNF143
APOBEC3B
AFAP1
BCAR3
LGALS12
ZNF426
CD2
KAT6B
PLAAT5
PAXBP1
TLR2
FGL2
SNX20
ZNF514
BCR
ZNF324B
ZNF117
ZNF761
VPS13D
LEP
SAP130
TSPAN5
DMAP1
MRPS16
PIP
IFI6
MINDY3
EDF1
OR4K17
ACY3
C2orf88
ZNF132
RPL39L
TEDC1
CRIP1
TACC1
ANP32D
PRSS38
PUM1
PXDNL
GPRC5C
LBP
ZNF613
CRIP2
ACYP2
MYH2
FAAH
DTX2
MROH7
RFC1
CEP85
RBPJ
SHISAL2B
NDUFS7
ACP6
EXOC6
C4B_2
C4B
IL22RA2
MED23
ENPP3
UBE2D3
ZNF627
SDR42E1
ADCY10
CISD2
IQGAP1
TYW3
CRYZ
ST3GAL5
SLC1A7
C10orf143
ACAA2
BAAT
COX16
ZNF165
AKR7A3
TMEM70
RPS29
RPL27
RABGAP1L
LMLN2
YWHAQ
IL36A
DIP2A
SEM1
MDM4
TMEM41A
ZNF623
LOC110384692
C4A
ZNF83
INTS12
GSTCD
YJU2
YY1AP1
DAP3
GPD1L
JMJD1C
GALNT1
CALCB
IFI35
PLEC
SATB1
SULT1C3
CEP72
NKX1-1
NUDT15
RBM33
ZMPSTE24
TMEM262
IFT88
SNAP47
NDUFB3
FAM126B
ELOC
LCN15
MRPL44
ZNF577
CYC1
ACOX3
NOS3
GDPGP1
CIB1
ZBTB44
NARF
GJC3
SELENBP1
TTC32
SAMD7
ZNF662
FASTKD1
POLE4
SAMD14
CHST3
CYP17A1
C19orf18
DCAF10
GPAA1
POLD1
BAX
MRPS33
FDX1
MRPL55
CALD1
C2orf69
BRF2
TTC30B
HERPUD2
LCN8
MAPRE2
SELENOH
PROKR2
TMEM43
CHCHD4
SRPRB
ZNF594
TCF25
TMEM14C
TMCO2
GTF2H2C_2
ZFP30
NRARP
SKP2
LMBRD2
POU2F1
HAUS5
GTF2H2
SLC41A3
APOL4
ZNF501
CLK4
CARD6
TRMT44
NXPE4
GTF2H2C
ZNF226
PRKACB
FRMPD4
ZNF440
ZNF280A
RERE
CHMP7
ENG
MYOG
TNXB
MOB3A
IZUMO4
PPP2R3A
TMEM106C
CCDC200
CLEC4M
RPL37
PSMD8
TOP3B
ZNF487
ZNF443
ZNF491
PIK3R1
SPATA13
CYBC1
PAFAH2
COQ8A
RBBP9
ABLIM2
ARHGAP45
COMMD2
TMPRSS12
TMEM62
ADI1
FN3K
UCKL1
EXOSC4
TM9SF1
EXOC3
C1orf159
ZNF878
ZNF561
ZNF614
RSF1
AAMDC
EAPP
CEACAM21
ANGEL2
SPACA3
LIPA
TOR1AIP2
TOR1AIP1
TTC26
IFNAR2
RTP5
FEM1B
RSU1
NME4
DECR2
ADCY3
FAIM
LCN6
KDM3A
TFPT
PRPF31
FKBP5
RPS14
ZNF408
ARHGAP1
FKBP9
GSTA4
ACBD6
CAT
TATDN3
NSL1
YTHDC2
CLDN16
ACER2
PPIP5K2
GTDC1
GIN1
CXCR2
TAS2R39
PSEN1
BAIAP2
REEP3
PCYOX1
GALK2
THAP11
PDCD7
TRIP11
PRAMEF1
GCNT3
ZSCAN29
TUBGCP4
IPO4
PPP1R11
RAD54L2
CYP4F22
PAIP2B
FRG1
DNAJB12
GIMAP4
SLC25A51
SFT2D3
ZER1
TIGD2
SEMA3D
TMCC3
BAG3
MAD1L1
TMEM68
TGS1
ZKSCAN7
NUTF2
CENPT
TESK2
MMACHC
CCDC163
VTA1
NMBR
ZKSCAN3
VARS2
GTF2H4
LOC100289561
PARP15
MLLT1
EPS8
RPIA
SUPT7L
SLC4A1AP
CATIP
RPL11
TM9SF2
PLA2G1B
EIF3L
ANKRD54
ZNF391
LSG1
WDR36
INTS5
GANAB
AUH
GLO1
TBC1D13
RUVBL1
HLA-E
NBPF1
RTTN
CD209
INO80C
ACTL8
FGFBP3
FBXO31
VPS37C
ZNF32
NRBP2
AP3S2
SLC2A7
BORCS7
STAT3
PARK7
CLPP
SNIP1
DNALI1
MSRA
ZNF222
MACC1
CDK5RAP1
SAR1B
TMEM44
WDR74
RPGRIP1L
FTO
PRIM1
TEX46
KDM1A
ACTRT3
MTERF1
ITGA4
ZNF350
PLA2G4E
L2HGDH
DMAC2L
TEFM
EIF1AD
CST6
BANF1
THOC5
POLR1H
CAMK1D
KRTAP10-7
RMND5A
LRIG2
EFCAB10
EPB41L2
RNF187
STAT1
TXNL4B
DHX38
ETFBKMT
STX5
JMJD4