ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1925740 | iPSC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◣ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2C
FRG2
DUX4
NOC4L
DDX51
ZNF436
MAMDC2
ZSCAN32
ZNF174
TMEM242
SNX11
CBX1
BCAR3
KLF4
B4GALNT4
SMCO1
SPATA13
PXDN
POU5F1
DYNLL2
JMJD1C
REEP3
KLF14
SRSF5
EDF1
RHOT1
TMEM216
HACD2
SOX2
ATP9B
COL23A1
DBNDD2
LUC7L2
FMC1-LUC7L2
FMC1
TM9SF2
TCF19
CCHCR1
SLC30A7
EXTL2
NKX1-1
ELOVL2
UBE3A
DIP2B
FAM184A
POU5F1B
SELENBP1
ATP6V0A1
GTDC1
PRDX6
CYB5R4
MAP3K4
C2orf69
AKR7A3
C1GALT1C1L
CLIC3
CCDC130
C3orf14
PLXDC2
RAB37
HLA-DRB1
TSPAN5
MAD1L1
DHX40
ZNF550
TBC1D22A
TMEM43
CHCHD4
KCNJ15
PER3
RPL26L1
ZNF487
SIVA1
FANK1
ARHGEF4
MTRNR2L1
NT5C3A
PLA2G4E
CHMP6
SLC28A2
GAGE2C
GAGE2B
GAGE2A
GAGE1
FRMPD4
ATP1A1
FEM1C
RPS14
ITGB3BP
EFCAB7
MTF2
CPT2
TLR2
HNRNPL
TMEM44
SPATA2
ZNF627
ENOSF1
PAQR9
RANGAP1
EDNRA
ZC3H7B
ZNF555
PTGES2
ZNF792
NBPF1
FAM227B
DTWD1
RNF187
ANK1
SPDYA
USP30
RTTN
VN1R4
SERPINB1
TMEM239
C20orf141
ZFP30
BRWD1
RNF212B
ST3GAL5
PEX3
ADAT2
MRLN
SLC17A5
SPATC1L
WDR33
TTLL12
SCAF11
ZSCAN31
RSU1
HMGB1
USPL1
PNPLA7
MRPL41
SMAD1
DRD4
CD47
TRAF6
RAG1
ARMCX1
ZNF300
DHRS7
ZNF24
ART1
PDCD7
C5orf34
SOX30
C5orf52
SAMD4B
GMFG
TRDMT1
MORC1
SLC11A2
RNF225
ZNF584
POTEH
AVPR1A
GTPBP4
C2orf88
ZKSCAN2
DCP1A
HS2ST1
SELENOF
SLC39A6
POLR2J3
RPLP1
SDCBP
TFPI
ANO5
ANP32D
CCDC200
ANKRD18B
C19orf18
EIF3L
ANKRD54
XKR6
EIF2S2
ZCCHC7
SEMA3D
GMDS
DUSP16
MRPL22
GEMIN5
NEIL3
ZNF614
COLEC11
UGT1A10
HUS1
IQGAP2
CLGN
TMX4
EP300
GAGE12F
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12B
GAGE8
GAGE2E
GAGE2D
GAGE13
NUF2
RAD54L2
CLPP
ZDHHC9
OR8J3
EPB41L2
SCGB1C1
ODF3
LBR
EDEM2
NEK7
ZDHHC18
SLC10A7
BTBD10
SYTL4
METTL8
KAT6B
TMEM98
RIPPLY3
RPAP2
GLMN
NEMF
TMEM41A
CAT
MOS
SAGE1
CT45A10
DNM3
STX16
PCDHB5
ARHGAP39
SLC44A1
MTRNR2L8
MRPL40
HIRA
CNIH4
SNX3
DNMT3L
STX18
MIS18BP1
ZSWIM9
LIG1
ADAMTS20
KBTBD7
C3orf80
BRSK2
TYW3
CRYZ
ZNF416
ZIK1
ZNF572
GTF2A1L
OR8B3
RNF38
CNTLN
ZNF562
MTERF1
ZMYM5
HLA-F
PPP2R2B
BTBD8
MAP3K2
NUP54
CNOT6
PLCL2
ZNF613
ZNF594
VBP1
HECW2
CHAF1B
HECTD1
EIF5A2
TASOR
PCDH17
CTNNB1
CRH
KCNF1
RFK
PRPF40A
ARL6IP6
MST1L
NLGN4X
NSFL1C
SPATA22
ASPA
PGBD2
ELF1
WBP4
C1orf53
BTG1
LHX9
PRELID3B
ILRUN
DLAT
ZNF486
PI16
FAM153B
FGL2
PARP16
SLC25A12
C5orf60
PSMG1
GPR150
KLHL7
YPEL3
TBX6
FGD3
INPP5F
YBEY
MCM3AP
RUNDC1
PTGES3L-AARSD1
PTGES3L
SULT1B1
USP35
KCTD21
AGBL3
ZC3H12C
FKBP9
MRPS31
SNRPB
TARS3
CLTC
ATE1
AP1AR
PJA2
DNAH6
UGGT2
YTHDF3
TMEM229A
SMYD3
PTPN12
OPRK1
LRIG2
LRP6
SPATA6
MARCHF7
FIGNL1
HSPA2
PPP1R36
ACBD6
VAMP1
ADAM22
RIMS2
UBE2D3
CISD2
ZNF623
RPL11
HLCS
KCTD3
WNT2B
GRID2
AP3S2
DEK
USHBP1
BABAM1
KANSL1
RTN3
ATL3
UGT2B10
GAGE12D
GAGE12G
GAGE12H
GAGE12E
GAGE12C
CLK4
RNF130
EPS8
PAAF1
KLHL41
CNTRL
C5
PPP1R9A
PCDHB4
MID2
DNAJC25-GNG10
DNAJC25
SLC25A53
FAM199X
GDAP1
PEX2
ZSWIM5
TNFRSF11B
COLEC10
GLRB
AKR1E2
C18orf21
ZSCAN18
UTS2B
CCDC50
KCNN2
TRMT5
SLC38A6
ZNF280D
TTC5
ARHGEF12
MAP3K19
SELENOT
RANBP2
LRRC8C
RPS29
NARF
CYBC1
LGR5
MRPL48
FAM98B
FKBP11
ITPR2
ZNF518A
RPL30
KBTBD3
AASDHPPT
SVOPL
FTCD-AS1
CARS2
ING1
FTCD
CLOCK
NUDT15
DSTYK
MRPL21
IGHMBP2
SMIM13
ZNF26
PPP2CA
ATG10
HACD3
POLE4
RMDN2
ALKBH3
TULP4
MED4
CCS
CCDC87
SMAD5
DR1
SV2A
C16orf89
ALG1
VPS37A
CNOT7
BOLA1
IER3IP1
ACYP2
TMA16
BCKDHB
SPAG5
FBXO34
SLC39A8
PARP4
CERS6
RSKR
C15orf61
INTU
PCDHB14
PCDHA3
PCDHA4
COX6A1
CHST3
REXO4
ADAMTS13
NOTCH2NLC
HYAL1
NAA80
HYAL3
CCNI
MS4A1
VPS26C
P4HA1
PCDHGB7
PCDHGA10
FHAD1
PRKD3
MTHFS
PCDHGA11
MICU3
DDX60L
ARHGAP45
SNIP1
DNALI1
CDYL
NCEH1
ZNF286A
CTSC
EPM2A
POLDIP3
TDG
C12orf73
GADD45A
TMOD3
AKNA
LRATD2
NAPG
P2RY1
SPATA7
ARHGAP32
VPS11
NOL12
HYOU1
ZNF25
MRAP2
STBD1
CYB5R1
ADIPOR1
RAD23B
BTG3
XKR4
HPS3
NELFCD
SORCS1
ZWINT
FAM193B
INTS12
GSTCD
CLEC4M
ZNF391
FAF1
MYLK
RNF125
RNF6
THOC3
ZNF791
ZNF490
CALM2
CDC20
ELOVL1
PIK3CA
TAS2R4
ZC3H15
ACAT1
WASHC1
SNRNP48
SSH2
NANOGP8
MRPS5
SMARCAL1
MFSD14A
SGIP1
RRAS2
OTOP1
CTXN2
MYEF2
KRBA1
TMX2
MED19
SHOX2
RSRC1
TSACC
EEF1AKMT2
FZD1
APOLD1
EIF4G2
CPD
SLC25A18
OR4K3
SAMD13
DEPDC1
ZKSCAN7
CREBL2
MTIF2
CPPED1
LHFPL4
UBE4B
NPIPA3
NPIPA2
PCBP3
PXK
CLN5
TYW1B
STK17A
GPD2
TTLL7
ENAH
PCDHGC4
PCDHGC3
ACP6
COMMD2
GINS1
NFE2L2
SH3BP5L
ZNF672
PPP1R12A
ARNT
ZNF606
E2F7
PIK3R1
RUVBL1
ZNF329
MRPL42
EEFSEC
STAG3
GPC2
RPS6
PHF3
SRSF12
GAL3ST4
ORC2
HERC4
KAAG1
DCDC2
BPIFB3
RFC1
DPY19L4
ANGEL2
WDR74
STX5
NDUFV1
FAM120B
WDFY1
NDUFA6
CRTAP
GOLGA6L7
TIGD6
HMGXB3
MBD4
IFT122
ZNF518B
SH3RF2
ELAC1
SF3A3
DIO2
SMIM12
RWDD2B
VAMP4
PCM1
SLC22A23
SMAP1
L3HYPDH
JKAMP
DTD2
FOCAD
GPR155
STX17
TRIM27
MDM4
PSMD8
ZNF829
ZNF568
SLC35A3
LIMS1
MAPK1IP1L
ARL4A
PRAMEF17
SS18
ARFGEF1
TACSTD2
ZNF341
LBP
TMPRSS12
CD14
ZSCAN25
MTLN
ZC3H6
CCDC71L
EIF3D
NPHP1
HACE1
HADH
CDC42SE2
CRHBP
RPGRIP1L
FTO
STAT1
ARHGAP9
MARS1
C9orf64
COPS8
SLC27A2
ZNF544
HSPA1B
DKK1
C4orf36
GNAI1
SOX4
MED23
ENPP3
GTF2H2C_2
GTF2H2
SUPT6H
SDF2
PDCD6IP
NSA2
GFM2
ADAR
SIAE
SCGB1C2
HDAC1
RHEX
OR56A5
UBQLN1
TOMM20L
RBM15B
MANF
JRKL
CCDC82
HEATR5B
GPATCH11
FH
SVIP
MPP5
COG6
TJP2
CHST14
LRRC7
SLC25A27
CYP39A1
BSDC1
CTAG1B
CTAG1A
B4GALNT3
TTC32
TTC30B
RBBP9
TATDN3
NSL1
YTHDC2
AUH
MRTFA
NAXD
ZNF680
OPRL1
OR1E3
RGS19
LKAAEAR1
SLC25A28
HDAC9
IRAG1
SEC61A2
ARL13A
CEP78
KIF1A
LIN7C
GPR88
RIOX1
LGALSL
PCDHA6
PCDHA5
C2orf66
TMEM106C
GTF3C3
RPS3A
SENP1
PFKM
ANKRD36
URI1
MUC21
KAT5
PDK1
ZFP42
RNASEH2C
NAP1L1
DEPTOR
ZNF662
MRPL17
XPO5
POLH
COX18
CRNKL1
CFAP61
HSPA1L
HSPA1A
NEK9
LSM2
SLC16A1
TBC1D31
ZNF354C
SMIM10L1
PRH1-TAS2R14
SETD5
ZNF285
RPN2
MROH8
NT5E
TRERF1
ZFP2
PCDHA7
PCDHA12
PCDHA11
PCDHA13
LRPAP1
PDS5B
ARL8B
AGK
RAD54L
ALKAL1
COG2
IQCF2
CA14
ZNF454
SPRYD7
NOL7
AKAP9
DRG2
HTR5A
DUS1L
ZC3HAV1
NCBP3
MUC3A
GNAL
GOT2
ZNF135
ZNF485
MATN3
SLC35B4
FBXL5
SYT1
ZSCAN5A
PAG1
DAPL1
SDR42E1
KANSL3
FER1L5
NOTCH2NLA
ABCC10
MTMR9
G3BP2
PCDHB10
PCDHB9
FLACC1
PCDHB11
PUS3
DDX25
FN1
PPIG
ZNF324B
ZNF132
PNMA3
FASTKD1
ACTRT3
MYNN
PPP5D1
CALM3
FAM172A
PPP1R8
RNF138
MPHOSPH10
MCEE
PTPDC1
MAGEF1
POLR3D
HECTD2
AATF
FNBP1L
PGAP4
ADGRG6
SLC45A4
ZNF566
TLNRD1
RAD52
ANO10
PCNA
TMEM230
ELF2
HERC3
PYURF
PIGY
ELAPOR2
ABHD5
CDS2
ITM2B
LRRC75A
FZD7
TMEM185B
PTGER3
POU2F1
C1orf159
ATR
PRKAR2B
DPP8
HDHD5
PSMA1
C6orf89
BTBD1
PPIL1
EGLN1
SCGB2A2
PDE3B
DNAH7
BTF3
SPACA5B
RNF32
NCAM1
SYT16
NID2
THUMPD1
FRA10AC1
MRPL44
KMT2A
ZNF443
LPIN1
KLHL20
MTBP
MRPL13
REM1
DEFB124
TBCK
AIMP1
NTSR2
AASDH
DCP1B
TBC1D5
POLR1F
SRSF11
ATP5F1E
PKD2L2
TMEM106B
LRRD1
GGA1
RHBDD1
CC2D2B
UGT8
CCDC138
CTHRC1
DPF2
CFAP206
EXOC6B
EDNRB
NRG3
CXCL6
FAM114A1
CLVS2
GRIA4
HMGCLL1
TRPA1
PRSS38
TMED9
B4GALT7
SRSF7
SMG7
MEMO1
ZNF670
FAM160B1
CYP51A1
UBE2Q1
CHRNB2
TMEM202
RPL6
PTPN11
CBR3
GABPB1
IMPACT
FAM161B
COQ6
FSD1L
SEC24B
GTF2E2
SMC3
PCDHB2
TTC12
PCDHB3
TRIL
FAIM
CCDC59
ZNF32
CEP70
CCDC88A
RTP3
LTF
RPL5
STXBP5L
LRTM2
ANKRD36C
SLC25A32
DCAF13
BTRC
TFAP2B
ANTXR2
RAB3IP
ZFYVE9
SYS1
TMEM267
GMFB
MRPS30
SLC36A1
DIPK2A
SLC38A1
P3H1
STRN3
AP4S1
ADRB1
B3GALNT1
ERV3-1-ZNF117
ERV3-1
EXOC2
ZBTB6
RC3H2
IFIT1
TRAM2
THAP9
SEC31A
AMZ2
RBM5
NOC3L
SLC35F5
MRS2
MINDY2