ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177903 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◣ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2
FRG2C
PMF1-BGLAP
PMF1
COL23A1
DUX4
MAMDC2
ART1
FANK1
LMLN2
TTLL12
KLHDC4
B4GALNT3
PHB
ZNF487
SUPT6H
SDF2
PMAIP1
SNX11
CBX1
ZNF264
NARF
CYBC1
PAXBP1
EEF1A1
CANT1
LOC102724770
DGCR6
PDXDC1
MRPS7
GGA3
MIF4GD
POTEH
UNK
H3-3B
NDFIP1
FAM117A
OTUD7A
SHOC2
BBIP1
FH
ATAD2
TCF7L2
NBPF1
MPZL1
CACUL1
KIF5C
ZMYM3
ZSCAN25
PHC2
MTRNR2L8
BAG3
BAGE4
BAGE
BAGE3
TMEM71
PHF20L1
CYC1
ALKAL1
MAF1
UBALD2
CCDC137
TTYH2
RPL38
ZFP91
LPXN
STX12
AHI1
GRB2
USP10
THOC3
WASHC5
NSMCE2
LEMD3
ABRAXAS2
OR8J3
TRAP1
CCDC30
ZMYND12
PPCS
ACSL3
CTAGE8
CTAGE4
SLF2
KIAA1549
REPS1
DNASE2
PDCD6
DDX17
ZNF12
SMC3
TRMT1
NACC1
MCMBP
SMNDC1
CLN6
C8orf76
UROS
BCCIP
EPN1
EXOC6
TNFAIP8
PRR14
FBRS
ABCD3
LOC100289561
SPDYE6
NME2
VKORC1L1
MSH3
DHFR
MTRNR2L2
EIF3F
SCAF11
WDR43
SMAP2
KLF5
SURF4
C10orf88
ATG16L1
CHORDC1
ATL2
EXOSC2
CSNK2A2
UBR5
ZKSCAN1
IMMP2L
PCOTH
MIPEP
C1QTNF9B
ZNF652
PLEKHA1
SEC61G
DNAJB12
FBXO11
ICE1
MTMR4
SPAG9
SPDYE13
DPP9
SEPTIN9
PPA1
NDUFAF6
TEX10
DYRK3
TACO1
TAF10
RRP8
ILK
TPP1
C7orf25
C15orf40
PIGF
CRIPT
SPATS2L
PRKACB
TSPAN10
NPLOC4
CCDC186
MTX2
BICD2
TDRD1
ST14
ABCA5
FBF1
EFR3A
SCGB1C2
LRRC47
XPO5
POLH
PKD1
DYNLL2
ARHGAP11A-SCG5
ARHGAP11A
CPT1B
CHKB
TADA1
SERF1B
SERF1A
ABL1
CEBPG
POMZP3
MTHFD2L
MYO5C
WAC
DPP8
MSANTD4
RPS15A
GLI4
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3D
TEPSIN
NDUFAF8
TBC1D3L
TBC1D3B
MTERF1
ZNF326
SMAD5
EIF2AK3
SEC62
KRTAP4-11
KRTAP4-12
SCGB1C1
ODF3
RMDN1
CPNE3
WAPL
PANK2
BSPRY
IREB2
NCBP2AS2
NCBP2
SRSF5
SIN3B
DECR1
USP7
ARHGAP29
ARHGAP39
HIPK1
GSTO1
IKZF5
ACADSB
ASPH
SMARCE1
CLK1
CCZ1
E2F3
SAMHD1
EIF3A
MSRB2
WNT16
ZDHHC6
VTI1A
EHD4
ALAS1
PKD2
LATS1
SPDYE16
DSCC1
MRPL20
BFSP1
POM121C
PREP
RBM42
CCNL2
SPDYE5
ESCO2
RDH14
DSTN
PLEKHA3
FKBP7
C8orf33
HGH1
COPG2
MROH1
ADAR
ECE1
ETNK1
PIK3CA
VOPP1
LGALS4
MTDH
TMEM139
CASP2
SDR42E1
TMBIM4
TRMT10C
CLTA
GAN
GPI
SUMO2
PDCD4
JMJD1C
TBC1D30
KAT5
RNASEH2C
RPL13
REXO2
GNS
CACTIN
TM2D2
ADAM9
OR2A7
MTRNR2L1
PDP1
FAM234B
FNBP1
ARF6
LSM6
CALCOCO2
RCN2
KRCC1
NOL4
COL4A4
COL4A3
SLC45A4
PDXK
SCYL3
C1orf105
PIGC
TMX4
WWP1
FXYD3
ZBTB6
RC3H2
SLC38A2
FAM13B
ZCCHC8
PNP
CRLS1
SBF1
PIP4P1
OSGEP
APEX1
TSPO
MCAT
RBM22
GSK3A
SAFB
SAFB2
C11orf97
ADM2
VAMP3
MEIS3
SS18L2
SEC22C
OAT
CLTCL1
ETS2
CBX2
RECK
SMARCD2
ALDH7A1
SENP1
PFKM
GLS2
PHAX
YTHDF1
MYD88
ACAA1
SEC11C
USP36
FAM169A
ACOX3
TRMT44
FBXO31
RWDD2B
MAP1LC3B
KIAA1586
POMP
USP16
DPAGT1
CCDC138
C2CD2L
RBPMS
TBXT
KLHL41
TESK1
MKRN1
PLA2R1
DUSP5
FADD
FARP2
ZNF706
RFT1
H2AC16
GFI1B
DGKZ
HPS6
ARMH3
PRPSAP1
TSC1
MS4A1
RPS27A
CLHC1
LEMD2
ELOVL5
MYLK4
NPC1
WRNIP1
IGSF3
TPT1
OR2J2
ZNF623
TIGD2
TEX46
KDM1A
MRTFA
ANKRD46
PLEKHF2
FAM83D
GPS2
EIF5A
MYBL1
RALGAPB
RAB11B
TMEM131L
USP33
ANAPC7
LRCH3
MICU3
HNRNPM
ELOB
FAM124A
NDUFAB1
MRPL38
TRIM65
OXR1
PLGRKT
PRDM4
TBC1D31
ANKLE2
RAB4A
PAWR
RGS22
NOTCH2NLB
SURF2
SURF1
RPL7A
MED22
TMOD3
MAPKAPK5
RAB5A
EFHB
FERMT1
CYB5R1
ADIPOR1
OSBPL5
DNMBP
TMEM245
TBL2
GJB2
SLC25A37
EXT1
ATP8B1
RAB18
AKIRIN1
PREPL
CAMKMT
EFCAB14
FLYWCH1
VPS9D1
PIAS4
TMEM160
MEST
PGAM5
YPEL2
RC3H1
ELOVL7
METTL23
JMJD6
ZNF775
PRELID3B
FRG1
RUVBL1
SPATA6
RP9
SBNO1
HGS
ARL16
EEFSEC
SOCS5
PGS1
LRRC58
TM9SF3
PMEL
UBE2Z
RAB5B
CDK2
TMCO3
DCUN1D2
DNPH1
PAG1
PRDM2
UTP18
MBTD1
INTS8
OTUB1
ATP2A2
ZBTB10
ARSB
FEM1C
COX18
RAB6A
SYT1
GLG1
ABI1
KRT19
UBE3A
PELI1
ARL8A
CXCL2
ACVR1B
PDPK1
PCNX2
SORBS2
CEMP1
AGO2
ERO1A
KRT15
DOCK5
COBL
ANGEL1
RNF169
TAF5
HERC3
ANTXR2
OCIAD2
VPS13C
C2CD4A
KRT10
MGRN1
RB1
CYTH1
TSPAN3
MCL1
FANCA
ANAPC11
ALYREF
TBC1D3K
TBC1D3F
DOCK1
TBC1D3
OR2B6
SCN8A
UBE2G2
DENND10
TBC1D3E
LBR
BMT2
SLC25A28
PM20D2
ACADS
FBXO33
SUFU
ACTR1A
TMEM175
GAK
NF1
SLC4A7
UBE2S
CTNNAL1
CHL1
EGFR
PEX7
NFAT5
TBPL1
TRAPPC3
MAP7D1
SPG11
HMGCR
GTSE1
MARCHF6
UHRF2
NEDD1
RAPGEF5
CTAGE6
RPL7
RDH10
TOB1
SYNPO
P4HB
FDX1
ACTL8
ASF1A
TERF2
MAP3K3
DYRK1A
NT5C2
GMCL1
NAMPT
VIPAS39
AHSA1
GIMAP7
RRAS2
YWHAH
C22orf24
HSP90AA1
SLC38A10
APPBP2
PDIA5
EPS8
NOTCH2NLA
CYREN
BZW1
GRPEL1
NFATC2IP
PLEKHG1
PDE6G
MFSD12
EIF2B2
ZNF607
ILKAP
LGALS3
HNRNPAB
PALM2AKAP2
ISL1
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
CLTC
UBN2
NUDT4B
GPN2
TRMU
XPA
CDR2L
ZFYVE27
EMC9
PSME1
LPGAT1
SEC63
HSPA4
FITM1
MAPK9
MST1L
CLYBL
CDC25A
SMARCB1
USP43
FRMD5
UBN1
GLYR1
CPT2
NT5C3A
ARID2
HEBP2
ITPRIP
MRPS36
PSMG4
ALDH4A1
GOLGA7
CCNT2
WASHC1
ARFGEF1
DENND2B
PPP1CB
TMEM131
ITM2B
GFPT1
UVRAG
AP3D1
PRIM2
RNF207
RPL22
EPB41
EMILIN1
OST4
URGCP
GPX1
RAD23B
GATM
SPATA5L1
MIS18A
SLC25A1
URGCP-MRPS24
ARHGEF35
MAFG
STIP1
RAB2A
PCYT2
SIRT7
CD9
ATP1A1
SMAD1
AGK
DYNLRB2
MARK2
TOMM34
STK4
RNF145
CNKSR3
PDCD5
SSRP1
P2RX3
DCAF12
MICOS10-NBL1
MICOS10
LRPPRC
FAM104A
C17orf80
PSTPIP2
GPRIN1
GPC1
ARHGAP17
NHLRC2
DCLRE1A
XPNPEP1
CD81
ZNF577
SLC38A9
CRELD1
ACSF3
APEH
SART1
FAM86B1
NUDCD1
SMAD3
DENND1A
YWHAZ
LSM11
DOCK9
ARL5A
DHRS11
MRM1
C9orf85
NANOGP8
ABHD17B
ANK2
SPATA6L
PLPP6
URB1
MORC4
MATN2
MKI67
PLCG2
POLE4
SRPRB
STAT3
PARK7
C1GALT1C1L
CTNNB1
LRRC59
RTN4
VAMP1
GTF2A1L
STX1A
RNF135
ZC3H4
DNAJC1
PINK1
CTPS1
CLSTN1
VRK1
NOP9
DHRS1
TYRO3
RALYL
HOXC4
KLHL20
CRKL
MTR
ARHGEF3
USP6NL
OSBPL8
EEF1AKMT2
TSPAN14
FBXL13
ARMC10
DERA
RABL6
SCARB1
MAGEF1
CISD3
CCDC183
SPG7
CENPC
HSPH1
SYBU
AGTPBP1
FCHO2
SEMA4D
STK3
NAF1
TPD52
FZD6
MTAP
CXCL1
FAHD2A
KIRREL1
TM4SF20
TGFBR2
CYRIB
SOD2
WTAP
MIF
MTMR12
PNPO
NSD2
VPS26C
TXNDC9
EIF5B
PHF11
C10orf95
TPMT
KDM1B
ZCCHC14
NELFCD
ANKRD28
TMEM51
CCNJ
MTFMT
FKBP4
TMCO4
MITD1
TRAM1
PTPRF
MACROH2A1
RHOC
HNRNPU
GALNT12
FAM53B
COP1
MIEF1
PPM1J
SBK1
ERRFI1
SINHCAF
FAM219B
TOP1MT
KLHL5
COPRS
SDHA
CCDC127
RHPN1
LRRC37A3
PGM2
ADPGK
RNF168
UBQLN1
C6orf226
EXT2
STAMBPL1
COX6C
KCTD6
HASPIN
STPG1
NIPAL3
FUCA2
CHAMP1
SLC26A6
ADHFE1
EIF3B
RRS1
ZBTB8A
SCD5
HACD2
HMGB1
NCKAP1L
CCDC88A
ZNF227
GHITM
TNFSF9
ITGA3
APOC1
SOCS3
SRSF2
MFSD11
HIPK3
ZC3H7A
CNN3
EYA1
ENTPD7
STMND1
FAM153B
PTPN4
FOXJ3
PHB2
NDUFS6
MRPL36
HEXB
UNKL
ATRN
DGKH
RNASEH1
H2AZ1
DNAJB14
C22orf39
TTBK2
TICRR
TADA2B
ODF2
STX17
DBNDD1
RHNO1
FOXM1
SPEG
RELCH
PIGN
PPP6R2
GAS8
CNNM2
FAM91A1
CCDC96
MSH6
SLK
PLBD2
FAM110C
C2orf69
SCAND1
NT5DC1
KDM3B
SULT1A4
SULT1A3
GOLGA6L10
PTP4A2
KRIT1
ANKIB1
EIF2S2
B9D1
MYO7B
DEF8
DLG2
IWS1
PTBP3
ZNF362
ARPC1A
B4GALT4
SLC25A10
MRPL12
OTULIN
ELOA2
MRPL52
MMP14
RPL14
SCRN3
CIR1
PLEKHH2
RBM12
CPNE1
TRERF1
DUT
ELK3
STX3
DUSP6
CDCA7
TMEM109
WASHC2C
NUS1
DOCK7
QSOX1
DESI2
UNC45B
NLE1
FBXW8
PRPF19
PROSER1
NHLRC3
MLYCD
ODC1
TEAD1
COTL1
PDZD8
TANC2
NDUFV3
COA8
BAG5
COG6
JPT1
PANK1
PWWP3A
CCDC178
IRAK2
PRRC2B
KCNJ1
GATAD1
HDAC1
EMC8
COX4I1
PISD
SLCO4A1
YES1
MEF2D
MARCHF8
RNF139
DDHD2
UBFD1
EARS2
GSTT2B
GSTT2
DDTL
DDT
OSBP
FBXO42
RCL1
CAPN2
CFAP100
POMT2
GSTZ1
PCDHGB1
PCDHGA3
UAP1
TAF9
RAD17
AK6
LYRM1
DCUN1D3
PCDHGA4
ROCK2
PCDHGB2
FEZ2
DPYS
IFT43
TGFB3
POPDC3
CYP2A13