ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX065546 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◣ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

BRSK2
KCNJ15
ZNF436
OBSCN
CYB5R4
SMCO1
GTPBP6
ZNF550
BSDC1
ITGB3BP
EFCAB7
APOC3
APOA1
ZWINT
ZNF555
MID2
C19orf18
WDR33
ZNHIT6
ZSCAN32
ZNF174
FGD3
IFNAR2
ZNF514
ZNF24
TSPAN5
AADACL4
DEGS2
INKA2
DDX20
SRPRB
SMYD3
YPEL3
TBX6
AKR7A3
LDHD
KRBA1
TTLL1
UBE2F
ZSCAN31
RRAGB
SNX11
CBX1
ZNF134
F2RL3
ZFP30
MTRNR2L8
OPRL1
RGS19
LKAAEAR1
ZBTB26
RABGAP1
STC1
SELENBP1
UQCRC1
TMEM89
RABGAP1L
ZNF829
ZNF568
DISP1
SAMD14
CPLX1
MRPL55
KAT6B
MAPRE2
ZNF32
ZNF572
LCN15
LCN8
LCN6
GBA
DNAJC25-GNG10
DNAJC25
NXPE4
TMEM161A
TBC1D22A
PDE11A
FRMPD4
ZNF623
SAMD4B
GMFG
IL22RA2
ANO9
PTDSS2
EDF1
ST20-MTHFS
TSKU
COMMD2
KRTAP5-2
KRTAP5-1
PRSS38
MTF2
COL23A1
SF3A3
ZNF433
ZNF878
CRLF2
ZNF891
ZNF10
YWHAQ
DUSP6
DHRS2
ZNF527
ZNF3
ZNF501
ZNF502
RBBP5
RPL12
LRSAM1
RNF187
GRAMD4
PTPRN2
TMEM229B
NUF2
COX16
CDCA7
CANT1
C1QTNF1
DBNDD2
COL18A1
NKX1-1
MROH7
ZNF300
NT5C3A
UTP3
ZNF792
GTPBP4
ABLIM2
CLTB
GLT6D1
IER3IP1
TBC1D19
ZNF292
FN3K
TEAD2
DKKL1
YY1AP1
DAP3
CFHR4
GPR35
PRKACB
ZNF726
TMEM109
TMEM132A
ZNF404
GALNT1
ATP5MC2
PRAMEF1
PXDN
ZNFX1
MYOG
TMEM41A
ZNF566
ATP5F1B
ZSCAN22
EIF4A3
ATP5MF-PTCD1
ATP5MF
CRYAA
CRYAA2
ZNF83
ZNF426
MMEL1
ID2
RPS7
LOC100289561
NRARP
TRMT5
SLC38A6
GCNT7
FAM209A
TOMM20
PRRT1B
IGFALS
ACTL8
ANP32D
RTP5
SOD2
WTAP
TRIP4
PCLAF
VARS2
GTF2H4
HTR5A
C10orf143
RNF125
MRPS33
RWDD1
SUCLG1
CCDC174
SSBP1
ZNF772
MAN2A1
EPHA3
RPIA
PHGDH
TSFM
EEF1AKMT3
GPRC5C
TTI2
ATP1A1
TLE7
RERE
CAT
CEP85L
GPBP1
NEMF
SELENOH
ZBED9
SLC28A2
SLC1A7
NTSR2
NDUFB3
FAM126B
NUDT14
SLC24A1
INTS14
PLA2G4E
MIPOL1
ZNF416
ZNF165
MED23
ENPP3
ZNF570
ZNF569
SNX20
ZNF75D
CWC25
C4B_2
C4B
LOC110384692
C4A
MRPL1
ARHGAP39
ZNF662
GLIPR1L2
VPS13D
ACTRT3
MYNN
MAST4
ZNF117
PEX3
ADAT2
AP3S2
CAPN11
ZSCAN18
SLC43A2
PDE1A
DPYSL2
PNMA2
BMS1
GTF2H2C_2
GTF2H2C
GALNTL5
SLC45A4
BRAP
ACAD10
ZBTB8B
LARP1
LMBR1
P2RX2
LRCOL1
TTC26
TIGD2
NBPF1
PAXBP1
EPB41L2
MNAT1
MLPH
MKLN1
C1orf159
DMAP1
TNXB
MTR
FBXW7
ZNF790
YJU2
ZNF350
OSGIN1
NOX5
ZNF614
PPRC1
ITSN1
CRYZL1
PEX7
TMEM242
CDC5L
PNPLA7
MRPL41
FAM71E1
MAMDC2
PNMA3
B3GNTL1
ZNF879
RAB18
TXLNB
SUMO3
JMJD1C
TESK2
MMACHC
CCDC163
NR1H3
ACP2
CCL24
SERPINA3
LRRC49
THAP10
FAM184A
RBBP9
FGFBP3
SNRPE
FAM13A
MMS22L
C2orf88
CFAP298-TCP10L
CFAP298
CAPN8
PLAGL1
IFIT1
C2orf69
PDCD6IP
SMG7
NDUFS7
KDM3A
DNAJB12
SIKE1
COX6A1
CCDC130
TTC32
TDP2
ACOT13
HDAC2
TMEM14C
TFF1
TFF2
FRA10AC1
FDX1
PAFAH2
RAB30
CYP46A1
POM121
PPIH
FAM193B
BANP
MRPS18C
HELQ
GCGR
RAB5IF
NARS2
TMEM44
ERN2
CDT1
APRT
TATDN2
TLR2
NME1-NME2
NME1
CYC1
GPAA1
EXOSC4
DNM1L
NEU1
RNF217
ZSCAN30
ZNF226
ZMPSTE24
TMCO2
RSU1
CCDC59
MRPL48
ZNF135
CALCRL
HSPA6
CHCHD6
PER3
ZNF594
FAIM
ZNF454
TEDC1
CRIP1
CRIP2
SKP2
LMBRD2
TFPT
PRPF31
TARS3
IARS1
REEP3
MS4A10
PDGFD
EIF2D
SLC33A1
SEMA3D
GABPB2
TMEM208
LRRC29
RUNDC3B
HECTD4
MSH3
DHFR
MTRNR2L2
SAMD7
ZNF391
PARK7
PRRG2
NOSIP
WDR70
NUP155
RANBP2
BPIFB3
ACP6
RCAN1
RIOK2
MANEA
POLR3B
CD14
POLDIP3
SLITRK5
LRFN3
LURAP1L
TMEM38A
SMIM7
RPL27
IFI35
ZNF571
ZNF540
POMGNT1
LURAP1
EXOC6
MACROD1
PUS10
PEX13
KANSL3
FER1L5
RBM45
CLEC18A
DUX4
RTTN
ZBTB33
TPM4
SPANXC
PNPO
DEK
MRPS14
ARHGEF39
HAX1
SIT1
CCDC107
TRMO
SLC30A7
EXTL2
STAT3
NECAP2
BORCS6
LIMK1
ZNF687
SYNPO2
WDR11
MRPS23
SMIM13
TMEM259
CNN2
PDXK
CTAG1B
CTAG1A
CD2
RPS29
CYP4F22
TACO1
SPANXB1
MT1HL1
THUMPD1
GORASP2
SAR1B
SMIM31
PKIB
SERINC1
GALK2
CCNC
CCNB1IP1
SNRPD1
PARP2
COPS2
ATP6V0E2
MMP8
ZNF708
TMEM43
CHCHD4
ZNF440
ZNF491
FAM120B
RPS3A
MYH2
DCP1A
BAIAP2
TEFM
OR1F12
SURF2
SURF1
RPL7A
MED22
GOSR1
HEXA
DDX43
STOML2
FAM214B
PIGO
SLC25A53
FAM199X
RPA2
ZNF354A
ZBTB8OS
RBBP4
TM9SF3
METTL8
DCAF17
NCOA7
GTPBP3
ANO8
TIGD1
EIF4E2
RIF1
TRAF3IP3
ZNF791
ZNF490
MYO1H
RPS14
RPL5
SAMD1
C19orf67
SLC35B4
TTLL12
STAT1
TMEM125
EPB41
LBP
TMPRSS12
MOB4
AMD1
CDK19
SGMS2
TBL1X
EP400
SLC3A2
VPS45
FAM174A
CACNA1H
REXO4
ADAMTS13
CUL5
DCT
ZNF20
E2F2
C1orf105
PIGC
RRP1
ZNF324B
ZNF132
STX16
NME4
DECR2
TM9SF2
BORCS7
PGAP6
TEX50
RPS13
ECHDC1
SLAIN1
ZNF285
SULT1C2
AURKAIP1
DIO2
DCLRE1B
AP4B1
INTS2
GYG2
SLC2A8
CCNL1
KRTAP13-3
SLC6A18
ARHGEF16
AFAP1
ZNF613
METTL7A
DSTYK
EPRS1
SCAMP2
PRKCZ
CLPTM1
APOC2
EFHD1
SNCG
MMRN2
MRPL40
HIRA
NUP54
PIH1D2
NKAPD1
NUP107
SLC25A16
NECAB2
RNF148
RNF133
MAP3K4
MSRA
MYLK
EFHD2
LRP6
SF3B5
SIPA1L2
RPL27A
STX18
DRG2
ZKSCAN7
REN
MIER1
DNAI4
KCNMA1
FAM13B
THEM4
EIF3F
POLG
COX7A2
SLC35A3
IL36B
IL36RN
MRS2
HACD2
LUC7L2
FMC1-LUC7L2
FMC1
SDR42E1
SPACA3
ATL1
ZNF385A
POLR1F
EXO1
IQGAP1
ST6GALNAC6
CARD6
RPL37
FKBP9
ZNF383
ZNF585B
PCDH15
IGFL3
PDP1
NOS3
TMCC1
NOP16
HIGD2A
RTL10
GNB1L
SPATA18
PLA2R1
PPIP5K2
GIN1
ZNF841
COPS4
NRL
DCAF11
CDC73
MITD1
HECTD1
IRAK2
MINDY3
PSMD8
KRR1
ZMYND8
TOGARAM1
KLHL28
SARS2
MRPS12
CLDN16
TMEM107
DYNLRB2
TTC3
FBXO44
FBXO2
PKLR
FDPS
ACTRT2
COMT
TXNRD2
APOBEC3B
SGPP1
WDR36
TAF12
TGFBR2
TRIM46
KRTCAP2
GPR137
SUPT3H
TRUB1
TTC7B
N6AMT1
PKP3
GOLPH3L
TYW3
CRYZ
ST3GAL5
ARHGAP45
KRTAP10-9
ALG10
MTMR9
CLEC18B
CHEK1
MOB1A
CNPY1
IFI6
SMIM12
RRN3
MFSD8
ABHD18
SPRR2F
HIGD2B
BBS4
PIP4P1
OSGEP
APEX1
HAPLN2
PXMP2
POLE
CDKL2
ACYP2
ZBTB44
PPP1R11
GSTA4
SLC2A7
CDK5RAP1
POLR1H
RNF39
USP21
NOL12
RPS12
PPOX
ZBTB22
TAPBP
DAXX
SMIM40
AFG1L
TCHH
GPR89A
CCDC97
OAZ3
LGR5
MRPL9
IFNAR1
ATG5
DDX41
DOK3
STXBP3
TRMT11
LAMTOR5
CCDC120
ELAC1
PPIG
NARF
PHRF1
CYBC1
TAS2R39
PDCD7
ZNF263
TPR
ODR4
GRPEL2
SLTM
LRRC59
GABPA
ATP5PF
FANCC
HMOX2
NMRAL1
UBOX5
FASTKD5
TMEM106B
CCDC33
SPG7
ZNF793
PFKP
RPL39L
ZNF561
LRP5L
PHIP
SRP9
ITFG2
PRDM1
HIPK1
GPN2
FOXP1
FOXO3B
METTL9
DDX46
TMEM72
GABRR2
CSNK1E
PRDX6
TM9SF1
IPO4
ADNP
LRP5
ZNF56
TNPO3
UBR2
ABCB10
FCGR3A
PNISR
P2RX6
ETNK1
POLR3G
MBLAC2
H2BU1
H2AW
LRP3
RGS18
ZNF443
CCDC200
SUPT7L
SLC4A1AP
LPIN1
HP
LOC102724265
ZNF846
PES1
DCP1B
MICU2
LOC100129484
TNRC18
TAAR5
SPATA33
LMTK2
BRF2
WBP1
INO80B
TAF4
PLK2
SEL1L
HEATR1
USP45
TSTD3
TCTE3
ERMARD
B4GALNT2
DCAF8
CLN5
SYT1
SNX14
SYNCRIP
CHRNE
C17orf107
CHIT1
OR4K17
RAB37
TMEM262
WDR74
STX5
TSEN15
ATF7IP
ARID1A
TRDMT1
GDNF
PLS1
SRP54
SLC2A4
SLC25A21
SAP130
ACY3
UBE2D3
CISD2
HMGB1
USPL1
ZKSCAN3
C3orf14
GOLGA5
ZSCAN25
ELFN2
SSTR5
HBS1L
EIF3D
SLC25A44
MRPS16
ADCY10
MTIF2
LIMS2
CNIH4
DHX16
ALDH9A1
ALG14
TMEM116
ERP29
PSMD11
NUP205
VPS26C
C6orf47
APOM
BAG6
SLC30A5
FGL2
SULT1C3
MAD1L1
TXN2
IST1
CPPED1
ATG4C
RIMBP3C
RIMBP3B
ABCA3
VPS35L
LGALS8
IRAK1BP1
ZCWPW2
AZI2
KLHL32
WBP11
C12orf60
DPYSL3
CALD1
ZNF189
MRPL50
C8orf37
MRLN
TIAM1
DEDD
CRNKL1
CFAP61
CYCS
CHD1
FAM234B
ZNF143
TMEM222
PPDPF
ZNF783
RIPPLY2
SPON2
MRPL24
UFL1
ANKRD36B
INPP4B
VAX1
AQP4
SLC17A5
DHTKD1
IMP4
CCDC115
TGM6
RSL24D1
ZNF335
SULT2A1
RSRP1
BOD1L1
H4C15
H4C14
H3C15
H3C14
SYF2
H2AC19
H2AC18
SMAD3
ASCC1
ANAPC16
DNAJC19
C11orf65
ENG
MED18
GTF2B
TAF13
IRF9
DUSP12
ZKSCAN8
WNK4
VPS25
GYPC
NMT2
SFXN2
ARL3
EXOSC10
MRPS31
TRUB2
COQ4
FAM228B
TP53I3
SF3B6
OPN1SW
TPK1
ARID3B
DNAJC24
DCDC1
MRPL45
GTPBP10
CCDC136
TAF3
CCDC124
RPAP2
GLMN
RUFY4
CERCAM
ACOX3
TRMT44
VTA1
NMBR