ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17826859 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◣ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

MSH3
DHFR
MTRNR2L2
MTRNR2L8
COL23A1
MED23
ENPP3
FRG2C
DUX4
GTPBP6
ITGB3BP
EFCAB7
FRG2
DSTYK
MTRNR2L1
MTF2
NUF2
POLR2J3
TXNIP
WDR11
FRA10AC1
TOR1AIP2
TOR1AIP1
C18orf21
SEC13
NDUFS7
DCP1A
GOLGA3
SF3A3
EIF2D
STX6
TMEM222
SSBP1
DCAF10
YARS1
S100PBP
INTS12
GSTCD
METTL9
CCNI
BSDC1
KMT2A
STAT3
PRPSAP1
REXO4
ADAMTS13
GBA
TOMM22
ZSCAN30
MRPL39
RNF187
NUP54
LRRC59
SLC24A1
INTS14
FAM180B
NDUFS3
KBTBD4
DNAJB12
MRPL44
AURKAIP1
TCF3
CASC3
GTF2H2
GTF2H2C
NME1-NME2
NME1
GTF2H2C_2
SMARCD2
TATDN3
NSL1
TTC4
SLC25A53
FAM199X
STX16
RPS7
BRWD1
PIK3R3
TSNAX
SNAP47
JMJD4
NOC3L
TARS3
SPATC1L
DHX40
MRPS31
RAD54L2
MID2
TM9SF1
IPO4
TMEM242
AGK
CCT2
SUPT7L
SLC4A1AP
USP30
DRAP1
C11orf68
EXD2
HMGB1
USPL1
PIH1D2
NKAPD1
INO80C
TRMO
NOTCH2NLC
ZNF76
LRP6
SLC44A1
MAMDC2
STX18
TVP23B
DRG2
EIF1AD
CST6
BANF1
TTC26
PEX3
ADAT2
IPO13
HEMK1
C3orf18
ZNF358
MCOLN1
PAXBP1
MRPL48
FRAT1
UBC
BANP
GOSR2
DR1
TMEM262
KCNIP2
MRPL27
EME1
BMS1
CRYAA2
CRYAA
ZMPSTE24
TMCO2
TOP3B
FLCN
DTWD2
CDON
CARD6
RPL37
NSFL1C
FBXO22
SELENOH
DMAP1
MTA2
TUT1
AJUBA
MRPS23
TMEM101
DPY19L4
TSEN15
RHOT1
RPL5
TACO1
WASHC2A
DEGS2
RBBP5
THEM4
PLEKHM3
TRDMT1
DYNC2I1
HDAC2
SLC39A13
AP3S2
PARK7
PDAP1
BUD31
FOXJ3
RWDD1
C2orf66
ZNF408
ARHGAP1
GTF3C3
SLC39A6
TMEM39B
PSMF1
KAT6A
UTP3
PHIP
RPL27
IFI35
TTYH2
CYB561D1
ATXN7L2
RPL38
NUP205
KANSL3
FER1L5
PCDH9
NPAS4
SLC35A3
SNX17
EIF2B4
ZNF513
ALKBH3
POLR3B
C21orf91
ZNF165
OR1F12
SAR1B
CCNC
FAM187A
EFTUD2
CCDC103
VARS2
GTF2H4
SOD2
WTAP
TPR
ODR4
NOL12
CLN5
PRPF18
SDHAF3
TBPL1
ZNF397
SLC27A5
ZBTB45
UROS
BCCIP
GFI1B
TSC1
FAM207A
TIGD1
EIF4E2
TBC1D19
TAOK3
KCTD9
CDCA2
SUDS3
ZSCAN22
TDG
C12orf73
TEFM
IBA57
LUC7L
FAM234A
WNK4
VPS25
COX16
HSPE1-MOB4
HSPE1
HSPD1
PET117
KAT14
YTHDF2
KRBA1
TTLL12
ABCA3
ALKBH5
MFF
WDR70
NUP155
PTDSS1
MTERF3
AFAP1
SMG7
PSTK
WASHC2C
TGDS
GPR180
ZNF24
ATG101
SMIM41
CCNG2
TTC28
NR1H3
ACP2
C10orf88
ZNF296
GEMIN7
SUMF1
PNPLA6
CCDC97
MITD1
PSD
FBXL15
POLD1
NR1H2
CZIB
WBP1
INO80B
MTIF2
MRPS15
PDCD6IP
ARRDC4
MAPK1IP1L
EIF3D
LAT
SPNS1
CCDC59
MRPL21
IGHMBP2
MAN2C1
CYP51A1
FEM1B
POLE4
AMD1
CDK19
VPS13B
LMAN2
RGS14
HDAC8
DDX1
KCTD5
N6AMT1
SPDYE14
SPDYE10P
INKA2
DDX20
NUB1
ZNF576
IRGQ
SNRPE
DISP3
SLC33A1
SCAND1
ATR
LRRC37A3
SNRPD1
UBE3B
SEC22B
COG2
MRPS7
GGA3
TM2D1
MIF4GD
L3HYPDH
JKAMP
INTS5
GANAB
HUS1
CHD1L
PRKAB2
MKRN2OS
MKRN2
THOC3
ZNF48
MYLPF
TBC1D10B
SEPTIN1
TBC1D13
MRPS33
FRG1
ORAI3
SETD1A
CALM2
PRMT2
ACBD3
TXN2
TM2D3
ATF7-NPFF
ATF7
ECSIT
CNN1
RPS20
DPP8
PRSS38
RUVBL1
NBN
EEFSEC
STOML2
FAM214B
PIGO
RRP15
HLCS
FMNL3
RAB11A
CLK3
COMMD6
ZNF862
BRPF1
NCBP3
MTERF1
SIKE1
GORASP2
EAPP
KLHL20
TCTE3
ERMARD
DISC1
ZNF212
BBS1
RFXANK
BORCS8
COA6
CSNK1D
MRPL40
HIRA
CDK5RAP1
ALG10B
NOP16
HIGD2A
TSC2
NTHL1
ZER1
AKAP10
ARHGEF1
SLC39A3
CD79A
DOCK7
FZD1
ZNF444
TRIP4
PCLAF
SUGCT
MPLKIP
SNRPD3
GUCD1
VAMP4
MIER1
DNAI4
TNPO3
THG1L
SIRT6
ANKRD24
GHITM
LY6L
ARL8B
PTPN21
CCDC88A
HPS6
ARMH3
DCP1B
TOM1
VTA1
NMBR
PDXDC1
ZNF219
TMEM253
GTF2IRD2B
AAR2
HEXA
ENSA
COX6A1
WDR36
GPAM
TRAF6
RAG1
CLPB
TRIAP1
VPS37B
PAFAH2
RSPH3
DDX59
PBX3
MSANTD2
SNX11
CBX1
CLIC3
SNRPB2
RPEL1
FAM193B
MTPN
LUZP6
UCHL3
RAC3
DCXR
GTF3C5
ZNF207
C17orf75
RNF125
STARD10
UNC45B
NLE1
BRF2
SAYSD1
SS18
IMPACT
NCDN
KIAA0319L
NDUFB3
FAM126B
HNRNPA1L2
BIRC5
MIS12
DERL2
UNC13B
TMEM41A
ESCO1
AARS2
MED4
NUDCD3
CTNNB1
DNAJC11
PLXNA1
CIAO3
TXLNA
APOC3
APOA1
STAT1
POLG
CLTC
U2SURP
SMG8
GFM1
TRNAU1AP
VDAC2
ZNF609
OTUD7B
PTS
TIGD6
HMGXB3
CMC2
CENPN
MBTPS2
SRCAP
LOC730183
TCAIM
ITGB1BP1
CPSF3
SLF2
YY1AP1
DAP3
ITFG2
HCFC2
GLT8D2
COIL
RPS4X
PHACTR4
MFSD14A
MOB4
ABCB10
BNIP1
RBL1
ZNF326
FHL3
ZNF23
UTP11
WDHD1
SOCS4
AHI1
PRKRA
PJVK
RBM28
KRR1
GOSR1
SCYL3
TAF3
PTP4A2
MRPS36
ZNF790
INO80
RBFOX2
NOXA1
ZBTB33
TGM1
RABGGTA
PLS1
DNAJC28
PPP6R1
SENP1
PFKM
LRCH4
FBXO24
ZBTB26
RABGAP1
NBPF1
ZCCHC4
SERBP1
PSMG1
BTNL9
CYREN
MPZL1
MRPL16
TBC1D22A
NOTCH2
ATAD2
PRMT3
TCP11L2
RCOR1
EXOC6B
TBCK
AIMP1
STMP1
NPIPA3
NPIPA2
BCL9
KIAA1958
C9orf147
RABIF
PDE6D
COPS7B
ZNF518A
DHX8
ATF4
ATG4C
HAGH
FAHD1
NDUFB7
SEC11A
ARMC8
MRPL3
ASNS
VPS72
PIP5K1A
ZFYVE27
ZBTB40
MRPL42
SLC25A28
TAF12
ATP5MC2
TSFM
BZW1
NEK2
GTF2H3
EIF2B1
MIS18A
CFAP221
GABPB2
SNRPB
TMEM167B
PTPRN2
ZNF391
MTR
PEMT
ANKRD13C
CARD9
GPSM1
LOC389831
SLAMF9
IGSF9
NFAT5
NDUFC2-KCTD14
NDUFC2
PRR14
FBRS
MPI
CCDC43
SH3GLB1
CIC
NECAP2
B4GALT3
MRPS16
MYCBP2
DNAJC9
TFAM
VMAC
NDUFA11
CD164
STX4
ZNF561
ACBD6
RMDN2
ZC3H6
EDC4
UFSP2
C4orf47
C2orf42
STT3B
HDAC4
MRPL55
COMMD2
CYP2E1
EFCAB2
DCTN4
SMN2
SMN1
BLOC1S2
ATP5IF1
ZNF514
DDX18
SACM1L
SRP9
PSMD6
RPS5
PDE4A
ZNF2
FOS
MOB3A
IZUMO4
GALK2
COPS2
ARID3B
TDRD9
ATP5MPL
SRI
ZNF335
MARCHF8
ZNF396
ACAT2
DAZAP2
MDM4
HTR5A
CDC73
TEKT2
ADPRS
TSPAN10
NPLOC4
SPECC1
SF3A1
CCDC157
TRMU
RBM34
SELENOW
TIGD5
EEF1D
LUC7L2
FMC1-LUC7L2
FMC1
INTS2
DHRS13
FLOT2
CRNKL1
CFAP61
FBXW8
SELENOK
ACTR8
PPP1R1B
MRPS5
RPAP3
STARD3
STX7
PEPD
ARL4A
CHMP3
LOC112694756
HOOK1
RAB18
PGBD2
KLHL12
RPL31
GIT2
ANKRD13A
NCSTN
COPA
THNSL1
ZACN
SRP68
GALR2
ARHGEF39
RIF1
SIT1
CCDC107
CCDC15
THUMPD1
GTPBP4
ZNF3
PPIP5K2
GIN1
TRUB2
COQ4
CBWD5
COPS6
CBWD3
CBWD6
S100A13
NUP133
KAT7
CMTR2
S100A1
CHTOP
EXO1
DENND6A
VANGL2
ZNF593
C1orf232
CNKSR1
CCAR2
C8orf58
GSPT1
CSTF2T
HDAC1
ANKRD36C
XPA
RPAP2
GLMN
OPA1
NMNAT1
LZIC
RPS3A
ZBTB17
ZNF461
CHPF2
ABCF2
RPS6
ARHGEF12
IFNGR1
HINT3
SLMAP
USP35
KCTD21
CHEK1
ZWINT
VPS36
CKAP2
REX1BD
XPNPEP3
ST13
DNAJB7
ANO5
MRPS18C
HELQ
STAM2
AP5S1
NCAM1
EIF4A3
MTBP
MRPL13
HNRNPD
MRPS14
GNB2
RAB39B
NDFIP2
OBSCN
SAMD14
KDM3A
RPS14
MYL12A
HYAL1
CREM
DCT
RBSN
ZKSCAN2
RNF138
YWHAE
HIPK1
PGS1
MYL12B
HYAL2
TUSC2
WDR33
PCNA
TMEM230
RBM17
PRPF40A
ARL6IP6
LRRFIP2
MYH7B
GSS
LATS1
PTTG1IP
BDP1
MAP3K2
TCP11L1
CPLX2
TOX4
RAB2B
STK38L
CCDC200
MRPL58
ZNRF4
SLC27A3
RWDD3
GPN2
GPATCH3
DUS3L
ESYT2
PRR22
TSG101
XRCC2
TPK1
MTMR9
RPS12
SLC2A12
ANGEL2
NET1
HNRNPH1
LAMP1
C7orf25
P2RY11
EIF3G
TUBAL3
NCOA5
TXNDC17
KIAA0753
VPS16
PCED1A
MRTO4
EMC1
WASF1
CDC40
SLC25A5
C1GALT1C1
CENPBD1
ROR1
TTC13
NOTCH2NLA
ELAVL3
CPEB4
MRPL38
TRIM65
TEDDM1
TSSC4
MYO1G
ZSWIM7
TTC19
PSMC2
DNAJC2
STK25
NAGPA
GLUL
TRIM16
BCAR3
LRRC49
THAP10
VPS33A
RAMAC
GOPC
FAM227B
DTWD1
ZFP30
RTTN
EIF2S2
HSPA9
MIA2
ASH1L
OPTC
FUS
C12orf66
RARS1
ZNF180
NPRL2
CYB561D2
TMEM115
DNAH14
RASSF1
ZMYND10
TRIP10
GPR108
TBC1D4
TTLL7
RGS9
NDUFB1
CPSF2
FAM228B
TP53I3
SF3B6
NOTCH2NLB
ZNF398
ZNF425
GOT2
SNRNP70
ABRAXAS1
EIF3B
TTI1
RPRD1B
RPL11
DUS1L
CATSPERE
ADSS2
GPR84
STAMBPL1
CACTIN
PTPRU
MECR
ZCCHC9
OR6B2
NDUFA10
ZBTB37
MTHFS
UBE3C
KCNJ4
CASZ1
KDELR3
PDE11A
PSMD3
EXOC2
RBM45
GARS1
AP1G1
AKAP1
SMC3
MAPK8
HMGCL
ZNF627
RABGAP1L
YIPF2
TIMM29
CCDC124
TMEM106B
MGAT1
VPS45
TUBD1
RPS6KB1
RNF32
FAM120B
CLUAP1
C16orf90
GLIPR1L1
CAPS2
HBS1L
TXNDC9
EIF5B
TIMM23
DHDDS
FUCA2
TANGO6
PUM1
TMBIM6
MEMO1
FDXACB1
C11orf1
ALG9