ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX672002 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◣ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

DUX4
FRG2C
FRG2
MTRNR2L1
CNOT3
RPS29
FAM153B
NEMF
CCNB1IP1
PARP2
OR2T1
IFNAR2
KCNJ15
ZWINT
SMYD3
THEM4
ZNF550
BRSK2
LDHD
OBSCN
ST20-MTHFS
MKLN1
KRBA1
DBNDD2
SMCO1
GCNT7
FAM209A
YPEL3
TBX6
TSKU
ATP5F1B
F2RL3
ZNF436
COL23A1
WDR33
TATDN2
LOC102724770
DGCR6
ZNFX1
PDP1
MSH3
DHFR
CYB5R4
ZNHIT6
AADACL4
MTRNR2L2
BSDC1
UBE2F
COX6A1
EIF4A3
CHIT1
CPT2
THUMPD1
ZNF708
MTRNR2L8
SLC28A2
DCTN6
UQCRC1
MAMDC2
MBOAT4
TMEM89
IRAK2
ZBTB8B
SLC30A7
EXTL2
GTPBP6
ZNF562
DUSP6
ZNF433
ZSCAN31
ITGB3BP
EFCAB7
EIF4EBP1
ZNF527
METTL8
PER3
DIP2B
ZSCAN32
ZNF174
DCAF17
DEGS2
MID2
SNCG
MMRN2
GTPBP4
TEAD2
DKKL1
FGD3
ZSCAN30
NT5C3A
GLT6D1
GBA
BPIFB3
MANEA
TBC1D22A
TTLL1
RHOT1
PDE11A
GORASP2
CTAG1B
CTAG1A
FAM184A
CDCA7
ZNF3
IER3IP1
CNGA1
LMLN
IQCG
ZNF134
HACD2
ZNF24
SARS2
MRPS12
ELAC1
SUMO3
ZNF792
COQ9
CIAPIN1
COMT
PEX7
ZNF555
PTGER2
TMEM242
ZBTB26
RABGAP1
TTC7B
GRAMD4
RGS18
TMEM229B
PRDX6
BTBD8
PADI4
FEM1C
SNX11
CBX1
TXNRD2
PPIG
MAP3K4
FAM234B
B4GALNT4
CCL24
ZNF572
COL18A1
APOC3
APOA1
CRP
FAM227B
DTWD1
NUF2
SPATA33
SLC27A5
FAM193B
GPR35
ZNF143
APOBEC3B
BCAR3
LGALS12
ZNF426
CD2
ADAM21
ZNF341
KAT6B
AFAP1
PLAAT5
ARHGAP39
PAXBP1
MTF2
RBBP5
TLR2
FGL2
C2orf66
SNX20
RPS7
BCR
ZNF324B
ZNF117
ZNF514
VPS13D
RGS21
SSBP1
LEP
SAP130
TSPAN5
DMAP1
ZNF761
MRPS16
PIP
AURKAIP1
NOX5
IFI6
CYP2C9
SAMD4B
GMFG
MINDY3
LUC7L2
FMC1-LUC7L2
FMC1
PRRT1B
OR4K17
ACY3
C2orf88
ZNF132
EDF1
MON2
RPL39L
TEDC1
CRIP1
TACC1
ANP32D
SF3A3
PRSS38
PUM1
PXDNL
IL21R
GPRC5C
STX16
LBP
GSTM5
ZNF613
NARS2
CRIP2
SCCPDH
ACYP2
MYH2
FAAH
DTX2
MROH7
RFC1
PTPRN2
CEP85
CHD1L
RBPJ
SHISAL2B
NDUFS7
EXOC6
C4B_2
C4B
IL22RA2
MED23
ENPP3
UBE2D3
ART1
ACP6
ZNF627
SDR42E1
ADCY10
CISD2
IQGAP1
TYW3
CRYZ
ST6GALNAC6
INKA2
DDX20
CLIC3
ST3GAL5
SLC1A7
C10orf143
ACAA2
DMXL2
BAAT
NME1-NME2
NME1
IGFALS
COX16
ZNF165
AKR7A3
TMEM70
DCP1A
RPL27
LMTK2
RABGAP1L
DNAJC25-GNG10
DNAJC25
LMLN2
CCDC130
PEX3
ADAT2
BANP
YWHAQ
IL36A
TTLL12
DIP2A
SEM1
MDM4
TMEM41A
ZNF623
LOC110384692
C4A
ZNF83
INTS12
GSTCD
YJU2
RAB37
YY1AP1
DAP3
GPD1L
EIF2D
JMJD1C
GALNT1
CALCB
IFI35
PLEC
SATB1
SULT1C3
CEP72
B4GALNT3
NKX1-1
NUDT15
RBM33
ZMPSTE24
TMEM262
SNAP47
NDUFB3
FAM126B
ELOC
FRA10AC1
LCN15
MRPL44
ZNF577
IFT88
CYC1
ACOX3
NOS3
KMT2A
GDPGP1
CIB1
ZBTB44
NARF
GJC3
SELENBP1
TTC32
PNMA3
SAMD7
ZNF662
FASTKD1
POLE4
SAMD14
CHST3
CYP17A1
C19orf18
METTL7A
DCAF10
GPAA1
POLD1
HMGB1
BAX
MRPS33
FDX1
MRPL55
CALD1
C2orf69
POLR2J3
DSTYK
BRF2
NPAS4
TBC1D19
TTC30B
HERPUD2
LCN8
MAPRE2
SGPP1
SELENOH
PROKR2
TMEM43
CHCHD4
SRPRB
ZNF594
TCF25
USPL1
TMEM14C
TMCO2
GTF2H2C_2
ZNF317
ZFP30
NRARP
TDP2
ACOT13
STX18
CFHR4
SKP2
LMBRD2
POU2F1
HAUS5
TRIP4
PCLAF
GTF2H2
SLC24A1
INTS14
SLC41A3
GLRA1
APOL4
ZNF501
CLK4
CARD6
TRMT44
NXPE4
GTF2H2C
ZNF226
PRKACB
FRMPD4
KIF5C
ZNF440
ZNF280A
RERE
CHMP7
ENG
MYOG
TNXB
MOB3A
IZUMO4
PPP2R3A
TMEM106C
CLEC4M
BTN3A3
RPL37
PSMD8
TOP3B
PNPLA7
MRPL41
DPY19L4
PHRF1
ZNF487
ZNF443
ZNF491
DRG2
PIK3R1
SPATA13
PRELID3B
CYBC1
ATP1A1
PAFAH2
COQ8A
RBBP9
ABLIM2
ARHGAP45
COMMD2
TMPRSS12
TMEM62
ADI1
SLC33A1
FN3K
EXOSC4
TM9SF1
EXOC3
C1orf159
ZNF878
ZNF561
ZNF614
RSF1
AAMDC
EAPP
POLR3B
CEACAM21
ANGEL2
UCKL1
SPACA3
LIPA
TOR1AIP2
TOR1AIP1
TTC26
RTP5
FEM1B
RSU1
NME4
DECR2
ADCY3
FAIM
LCN6
CCDC200
KDM3A
SMARCD2
TFPT
PRPF31
FKBP5
RPS14
ZNF408
ARHGAP1
FKBP9
ACBD6
CAT
MRPS31
TATDN3
NSL1
YTHDC2
UTP3
CLDN16
ACER2
PPIP5K2
GTDC1
GIN1
CXCR2
TAS2R39
CCDC59
PSEN1
BAIAP2
REEP3
PCYOX1
GALK2
THAP11
PDCD7
TRIP11
PRAMEF1
ALG10B
GCNT3
NSFL1C
ZSCAN29
TUBGCP4
IPO4
PPP1R11
RAD54L2
CYP4F22
PAIP2B
SLC44A1
FRG1
DNAJB12
GIMAP4
SLC25A51
SFT2D3
ZER1
TIGD2
GTF3C3
SEMA3D
TMCC3
EIF3F
BAG3
MAD1L1
TMEM68
TGS1
ZKSCAN7
NUTF2
CENPT
TESK2
MMACHC
CCDC163
VTA1
NMBR
ZKSCAN3
VARS2
GTF2H4
LOC100289561
PARP15
MLLT1
EPS8
RPIA
SUPT7L
SLC4A1AP
LRPAP1
CATIP
REXO4
ADAMTS13
RPL11
TM9SF2
GSTA4
PLA2G1B
EIF3L
ANKRD54
ZNF391
LSG1
WDR36
INTS5
GANAB
AUH
GLO1
TBC1D13
RUVBL1
MRPL40
HLA-E
HIRA
NBPF1
RTTN
CD209
INO80C
ACTL8
FGFBP3
FBXO31
VPS37C
ZNF32
NRBP2
AP3S2
SLC2A7
SMG8
DIO2
BORCS7
STAT3
PARK7
CLPP
SNIP1
DNALI1
TIMELESS
MSRA
ZNF222
MACC1
BMS1
CDK5RAP1
SAR1B
TMEM44
WDR74
RPGRIP1L
FTO
KIAA1549
PRIM1
PPP6R1
COLEC11
HTR5A
TEX46
KDM1A
ACTRT3
MAP3K2
DRAP1
C11orf68
MTERF1
ITGA4
ZNF350
PLA2G4E
L2HGDH
DMAC2L
TEFM
EIF1AD
CST6
BANF1
FAM207A
THOC5
POLR1H
CAMK1D
KRTAP10-7
RMND5A
LRIG2
EFCAB10
EPB41L2
RNF187
MYL12A
STAT1
TXNL4B
DHX38
ETFBKMT
STX5
JMJD4
ANK3
CCNT1
TTC13
ZBTB45
TACO1
ZNF841
ESR2
SCMH1
PRIM2
TMCC1
ZNF891
ZNF10
ORC4
MBD5
REN
ZNF829
ZNF568
DCLRE1B
AP4B1
TSEN15
HSD17B6
NPR1
ILF2
ZNF582
SNX17
EIF2B4
GINS1
TAF12
ORC5
SCAND1
PDE6D
COPS7B
DEK
SUPT6H
SDF2
MRPL21
IGHMBP2
GBP4
SCARF1
RILP
C3orf14
PSMF1
KANSL3
FER1L5
PHGDH
PDCD2
CANT1
RAB30
ATP5MC2
USP30
SLC29A2
TNFRSF1B
LARP1
SGCE
PEG10
ZNF502
SMIM12
LPIN1
CYP46A1
POLR3E
CREBL2
KRTAP10-8
ATF7IP
TRUB2
CTSV
COQ4
NCOA7
OTUD7A
EML5
CCSER2
NCKAP1L
FRRS1
PHB
CCDC97
TMEM222
TTYH2
ZNF772
RALBP1
WDR11
SMAD1
DUS1L
GTF3C5
PRRC2B
FAM133B
MRPL20
ZNF557
SCAF11
ATR
SMIM31
C1GALT1C1L
BACH2
ZNF571
ZNF540
HLA-C
NBN
ZNF394
SETDB1
SPAAR
HRCT1
CYB561D1
TMEM161A
MTA2
CD47
FAM228B
RMND1
ARMT1
ABL1
ZBTB40
DNM1L
C1orf167
TXN2
MOB4
CRLF2
PGAP6
B3GNTL1
ZNF207
C17orf75
CCDC150
FBXL12
GAS2L3
AKAP10
MTIF2
MRPL1
PDS5B
SRRM3
MIPOL1
ZNF513
NECTIN4
ZNF263
TNFAIP8L2
BNIP1
TUT1
DPP9
MCF2L2
IST1
WDR43
COPS4
GTPBP3
ANO8
LY6L
TP53I3
SF3B6
GASK1A
CIPC
ARID1A
ADNP
OAZ3
LGR5
TMED9
MACROD1
C16orf54
PRAMEF14
MRPS18C
HELQ
ZC3HAV1
MMP7
KLHL20
ATP9B
KRTAP10-9
B4GALT7
AGL
PCP4L1
DUSP16
UBE2H
GABPB2
PDCD6IP
CD14
RAX2
TMEM79
SMG5
NDUFV1
SCNM1
LYSMD1
TMOD4
NOTCH2NLC
UGT1A10
NFE2L3
HYAL1
NRL
DCAF11
ZNF441
FAF1
ZNF300
HSPE1-MOB4
HSPE1
HSPD1
KIF2C
MRPS23
ERV3-1-ZNF117
ERV3-1
EPM2A
SAMD4A
N4BP2L1
TTI2
NUP54
DND1
NSA2
GFM2
C10orf99
SLC45A4
CCNC
PLEKHM3
MRPL48
DDX18
WDR55
CPPED1
NCBP3
ABR
STAU1
ANXA2
TMX2
MED19
MRPL9
CFAP298-TCP10L
CFAP298
BDH1
SERPINB1
POLG
TNFAIP8
GOLGA5
CTNNB1
FBXO38
RPL10L
ZNF566
NAA20
ZNF611
ERN2
PRKAR2B
CLDN4
SNRPB
NDUFAF1
HACL1
DNAJC3
BTD
NOTCH2NLA
ZSCAN25
RNASET2
MLEC
EXO5
CASP4
ZNF189
LRP5L
LZTR1
RTCA
SEC13
RMDN2
MYNN
SNAP29
PI4KA
AFAP1L1
FAM180B
CLTB
HS2ST1
INPP5F
ZNF230
CDYL
TMEM101
MNAT1
CDC73
PIN4
NAA80
HYAL3
ATXN7L2
TYSND1
MRPL50
MAN2C1
MITD1
C8orf37
TTC4
SERHL2
TPR
ODR4
ZNF609
LSS
NR1H3
ACP2
RPS20
ZCCHC4
INPP4A
ANKRD65
F11R
GFI1B
CASP10
H4C8
CCNI
VBP1
OPA1
NDUFS3
KBTBD4
POM121
RBM26
TEKT2
ADPRS
KLRD1
ABLIM1
BRWD1
B3GALT2
WDR3
GDAP2
CCAR2
C8orf58
CYREN
TLE7
MTBP
MRPL13
HP
HNRNPD
MYLK
PDIA4
ZNF34
RNF126
TLNRD1
PSRC1
NOP16
HIGD2A
PRPF18
ZNF589
ARL8B
CPA2
RRAGB
GMPS
COX7A2
SUGCT
MPLKIP
C11orf49
C18orf21
TMBIM4
EPRS1
GRPEL2
SPATA22
TPM1
SLTM
GPAM
LRRC37A3
PRRG2
FABP6
MED18
SMU1
STOML2
GGNBP2
TMEM125
SNRPD1
NOTCH2NLB
HUS1
NRSN2
MYO19
TIPARP
RNF39
SPANXB1
REM1
DEFB124
SLC35E2A
LUC7L
FAM234A
ZNF398
IAH1
LRRC59
LRP5
LOC102724265
TSFM
DGKZ
ING2
SDHAF3