ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457586 | K-562
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◢ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◣ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

KRBA1
OBSCN
BRSK2
DUX4
SMYD3
BSDC1
ZWINT
SUMO3
ZNF436
LDHD
EXOC3
COL18A1
MTRNR2L1
GTPBP6
ZBTB26
RABGAP1
TSKU
PPIG
ZSCAN31
COX6A1
ART1
MKLN1
ZNF3
SNAP29
PI4KA
LUC7L2
FMC1-LUC7L2
FMC1
ST6GAL1
DCTN6
MBOAT4
NARS2
IL36A
ADCY3
TMEM74B
GTPBP4
C1orf158
SAMD14
TMEM191C
C1orf167
PRRT1B
SNIP1
DNALI1
SARS2
MRPS12
CCDC130
DNAJC14
ZSCAN32
ZNF174
SAE1
CEP164
ICAM5
ZGLP1
THUMPD1
KAT6B
UBE2L3
RIMBP3C
RIMBP3B
PRELID3B
PDIA4
CPT2
GORASP2
SAMD4B
GMFG
TATDN2
SLC25A33
DEGS2
GLRA1
AKR1B1
PLAU
GUCA1B
ZNF623
ELAC1
PRAME
ZFP30
ATP1A1
NEMF
MROH7
GOLGA5
KCNJ15
CREB3L3
IL21R
MAPK1
EIF3L
ANKRD54
ZFAND6
TRUB2
COQ4
SNRPE
BANP
BCR
TRAF4
TLCD1
NEK8
FKBP5
GJC3
ADAR
SAMD7
BAIAP2
ZNF165
FAM153B
RPL26L1
ST20-MTHFS
CLEC4M
RAB42
RAC1
NDUFS6
MRPL36
HDAC9
HLA-E
CPA2
PAXBP1
UBE2F
ZNF514
TEAD2
DKKL1
ENG
ATP5F1B
EIF2AK2
RBM33
ZNF440
ZNF491
CLDN16
ZNF572
GPRC5C
RPS29
IMMP2L
HK1
LOC388813
PARP15
POM121L2
STAU1
EIF4EBP1
RP9
NUP214
WDR70
NUP155
LBP
FN3K
NBPF1
SYNJ2
ARHGAP39
KLHL20
VN1R5
YWHAQ
TMEM41A
PPIL2
ZNF628
ISOC2
WDR43
FOXN1
TOPAZ1
ZSCAN29
TUBGCP4
ZNFX1
NME4
DECR2
PGAP6
GGNBP2
MYO19
PIGW
ZNF222
PDCD6IP
CLIC3
PAXX
LCNL1
CTAG1B
CTAG1A
LONRF2
DBNDD2
LGALS12
PLAAT5
ZBTB6
RC3H2
ZNF433
LLPH
POLR2E
GPX4
PRKAR2B
TMEM43
CHCHD4
GYG2
F2RL3
CEP85
ZNF230
ATP5MF-PTCD1
ATP5MF
MOGAT3
ZNF789
RPAP1
GCNT7
FAM209A
GRPEL2
MS4A6A
SIGLEC14
PRSS3
AURKB
NDUFS7
ANGEL2
YTHDC2
GBA
OPN1SW
JSRP1
OAZ1
ZZEF1
CYB5D2
ZSCAN30
SMU1
RBMXL2
RASA4B
YY1AP1
DAP3
EYA3
COMT
TXNRD2
ITGB3BP
EFCAB7
PER3
MYOG
SP140
SP110
CD2
LMTK2
MAP1LC3B2
CHIT1
CABP5
ZNF761
TMBIM1
SERPIND1
HSPA1L
HSPA1A
HSPA1B
COQ8A
ARTN
CYP17A1
ZNF32
KIR3DL3
KIR2DS5
KIR2DS3
SEPTIN5
GP1BB
CFAP36
PHRF1
UBE2H
CSNK1G2
ZNF316
KRTAP12-2
KRTAP12-1
ZNF263
BTNL9
AUH
VHL
MRPS16
TPGS1
FAM13A
MIIP
CLK4
CALML3
HFE
HDHD5
IFNGR1
FABP6
CALML6
TMEM52
ADCY10
ZNF394
SELPLG
ZNF555
MAPRE2
IGFALS
UTP3
SEC61A2
E2F2
ALDH9A1
GPR3
CD164L2
HTR4
GNL3L
BRD7
PIPOX
SOX7
SGPP1
FCGR1A
TMEM62
LOC102724265
TGIF1
ZCCHC24
AADACL4
FBLN2
ERVH48-1
YPEL3
TBX6
ZNF134
TTC26
RALBP1
FOXK2
UQCRC1
TMEM89
TMEM140
TOR1A
EPB41
ZNF426
CHD1L
REN
ZNF385A
NME1-NME2
NME1
RCCD1
DMAP1
SULT2A1
SUB1
ST6GALNAC1
HAPLN2
GDPD5
ATG101
C5AR1
ZBTB40
TAF4
SEC14L2
RNF215
PLEKHG4
PRPF3
ZNF391
PKMYT1
SLC30A7
EXTL2
TANGO2
ARVCF
SPAG4
IFT140
CRAMP1
ZFP36L1
ZNF662
BAX
MRPL55
GRM4
LPIN1
RNF126
FSTL3
RAB11FIP1
METTL8
DCAF17
SNX11
CBX1
IFI6
C9orf16
SNCG
MMRN2
CLPTM1
APOC2
NDUFA6
NRCAM
ZNF614
MED15
EFHD2
TENT5B
WARS2
PPP5D1
CALM3
SORD
METTL7A
ZNF550
VARS2
GTF2H4
NRSN2
CRKL
GATAD1
LMOD1
TIMM17A
SPACA6
CASS4
HTR7
PDE11A
RBBP5
CYTIP
KLF2
FZD9
GSTM5
SELENOH
RPS14
ZBTB8B
INKA2
DDX20
ZNF777
ATP23
STX16
LZTR1
MRPL34
ABHD8
DDA1
SLC25A16
RFX2
SMARCC1
RBM26
CPA1
GRAMD4
MTIF2
ARHGEF4
CLTCL1
CYP4F22
CCNB1IP1
PARP2
MEFV
POLR2J3
RBBP9
RAB5C
TTC32
BORCS7
SLC1A7
BTBD8
C6orf89
TAF10
RRP8
ILK
MADCAM1
TPP1
ODF3L2
RIMBP3
DCLRE1B
AP4B1
LSS
CACNG1
JRKL
CCDC82
RERE
DNAJB12
TMEM44
ARFGEF2
MARCHF2
IL22RA2
SETDB1
KRTAP10-9
AMD1
N4BP2L2
CDK19
ZNF20
HDGFL2
ZNF792
FEM1C
SSBP1
POLE4
GABPB2
RTL10
GNB1L
MLLT11
TMCO6
NDUFA2
IK
CDC42SE1
ARSD
PSKH1
NRN1L
ZNF143
PGLYRP4
TAS2R41
RUBCN
FYTTD1
MAFG
PYCR1
AURKAIP1
ZNF439
ZDHHC14
TRAPPC9
OR2W3
C4B_2
C4B
ZMPSTE24
TMCO2
ZNF317
TNXB
USP48
ZNF708
CCL24
ZNF438
RLN3
IL27RA
THEM4
ZNF562
SPIDR
CRYAA2
CRYAA
SMIM13
DDX27
EHD1
MKNK1
EXOC6
TDRD7
BCL7B
SMG8
FBXO8
CEP44
LEP
GLIS2
CYP4F11
LINGO3
OR10H4
ABHD3
ZNRF4
ERMN
ZNF311
ZNHIT6
HLA-C
STRIT1
APOD
STAG3
GPC2
GAL3ST4
MAP11
C11orf96
B4GALNT4
APOBEC3B
ZNF501
CARD6
ZNF502
MRPL20
ANKRD65
P2RX6
SPINT4
HERPUD2
LSR
KRT25
AIFM3
ZNF487
AIG1
HECW2
KIAA1958
C9orf147
PTPRF
ZNF780B
RCC1L
SPON2
GNB2
NUB1
H2BU1
H2AW
CYB5R1
ADIPOR1
DGCR6L
GPR182
BPIFB3
PRIM2
LRP6
NDUFB3
FAM126B
TMCC3
PDAP1
BUD31
TRIM52
CHEK1
TMEM275
ZNF852
FER1L6
DIP2B
MON2
GLO1
C8orf37
INTS1
CCDC6
CNOT6
SET
SMN2
SMN1
PPP6R3
IL15RA
TRPM6
KLRC1
FRG2C
FAM184A
NUF2
WDR74
STX5
RNGTT
PAK1IP1
C6orf52
TMEM72
PLIN5
LRG1
IQGAP1
MDM4
PPP6R1
DHTKD1
TYW1B
NBEAL2
CCDC12
BICD2
AFAP1L1
ZNF683
RAB33A
SLC25A23
CRB3
EEF1AKMT3
CCZ1B
UFSP2
C4orf47
PKD1
METTL1
CYP27B1
RAB26
LAMTOR4
TONSL
IER3IP1
ZNF408
ARHGAP1
NECTIN4
PPIH
PPM1F
STK11
ZNF117
KRTAP10-7
ERV3-1-ZNF117
ERV3-1
SURF2
SURF1
RPL7A
MED22
SLC25A53
FAM199X
KRTAP10-6
VPS37C
FAM180B
CCNI
NDUFS3
KBTBD4
TM9SF4
RASGRP3
FUT10
KCTD9
CDCA2
PIK3R3
IZUMO1
TSPAN1
P3R3URF-PIK3R3
P3R3URF
FUT1
FGF21
RPS19
ANKRD60
NLRP2
TMEM242
TTC7B
NRBP2
UFD1
CDC45
MYCL
TRIT1
OBSL1
INHA
SUPT7L
SLC4A1AP
NR2C2AP
NCAN
FAAH
CXCR2
ARID3B
MZF1
ATAD3A
PRPH2
RAB39B
TOR4A
MAP1LC3C
MOB1A
POLG
CCDC116
PDE7A
MOB1B
ZSCAN9
LEUTX
CCSER2
LTN1
HTRA2
DQX1
GNG14
DHPS
CSF1
PTGES3
PADI4
MTOR
RSAD2
THRA
MED24
IVNS1ABP
ASB8
CCDC59
CCAR2
C8orf58
ARPC2
AGO1
IDUA
SLC26A1
SDF2L1
CPSF1
SLC6A19
SPATA33
ZMAT2
HARS2
HARS1
MAD2L2
GGPS1
ARID4B
DRAXIN
RSF1
AAMDC
POLR3B
CMIP
FAM86B1
CFLAR
SLC16A5
DAPP1
MLLT1
RBAK-RBAKDN
RBAK
TRAM2
ZNF138
ABCC9
CSTF3
BSG
INO80C
HACL1
BTD
SPSB1
CLEC18C
MPZL1
GCLM
NUDT7
SYCE1
CMTM6
SNX20
MTA2
TUT1
BIRC2
SCAMP4
ADAT3
TRIM67
COL1A1
PCTP
AJUBA
DYNC2I2
ENDOV
FOLR2
SAP130
PRRC1
PIH1D2
NKAPD1
MEMO1
ZBTB22
TAPBP
DAXX
HOOK2
RPL23A
HERC1
RAB34
PROCA1
BPHL
SLC38A1
TRIM63
VPS13D
RPS15
CALM2
KAT5
RNASEH2C
TTC9B
SLC36A3
MAP3K4
TLE7
HNRNPF
GOSR2
TMEM240
ANP32D
ACTL8
RBL1
SRCAP
LOC730183
COG7
DDX21
TBL2
CYC1
GPAA1
EXOSC4
HDAC1
ZNF485
GNG8
PEX7
FOXP4
SLC3A2
DRC7
WASF2
POLR3F
DZANK1
TMEM120A
UBE2D3
ZNF627
CISD2
TMEM262
ASIC3
MGST3
CCDC71L
TRMT11
DIDO1
GPX1
GID8
SECTM1
YME1L1
SDHB
NIPA2
RPS8
PANX3
TOP3B
MAD1L1
RMND5A
NR1H3
ACP2
NUDT1
MRM2
PDZK1IP1
RPN1
SOD1
CDCP1
NICN1
AMT
OR8B8
RPL27
IFI35
MAGOH
DPH7
RTP5
SMAP2
NXPH3
POM121
SETD4
CBR1
UBE3B
RRP1
ARPC1A
TXNDC2
HPR
SLC28A2
ACOX3
TRMT44
ADI1
PAAF1
NUDCD3
WNT9B
SUN1
SLC27A4
COA4
SLC44A2
NRBF2
ITPK1
SRSF4
ZFP69
INTS7
DTL
HNRNPA0
MTSS2
SMYD5
RHOT1
ACP6
MTMR12
ACSBG2
KCNH2
HYDIN
TEN1
ACOX1
DGCR8
KIF25
CIBAR2
ST3GAL4
WFDC3
DNTTIP1
SGTB
NLN
WDR33
CCNT1
ADRM1
MFF
PLIN3
TEX49
EFCAB13
ACTL10
C20orf144
RXFP4
KHDC4
SLC25A1
NECAB3
LMLN2
LOC100289561
VMO1
PSMB6
GLTPD2
NARS1
SELENON
ST7
CEBPE
CYB5R4
NOX5
AGGF1
PTGS1
GPR84
NCAPG
KLF16
DIP2A
TNFRSF1B
RNASET2
OPN1MW3
OPN1MW2
OPN1MW
RACK1
PLK3
TCTEX1D4
BTBD19
CSTF2T
RIPK1
ZNF57
HSPG2
SLC6A9
FAM220A
DND1
MRPL48
WDR55
PIGQ
LAG3
MRPL27
EME1
CLBA1
AHNAK2
NHLRC4
ZNF101
ATP13A1
KCTD14
PRR35
ZNF346
OR8G2P
TMEM42
QRICH1
HNRNPH1
PFDN5
MYG1
DHX40
VWDE
EEF1AKMT1
WNT10A
H4C9
H2BC11
H2AC11
INMT
SLC34A1
MINDY4
RTTN
NOP16
HIGD2A
CFAP20
RPL5
TRIM5
UBOX5
FASTKD5
TRIM22
WAC
CCDC120
PKIG
CDR2L
AGBL3
HID1
COQ3
NOS3
PAFAH2
LARP1
INTS2
PLXDC1
CENPP
PHF19
NOL8
NLGN3
NECAP2
AIFM1
C6orf47
APOM
HECTD4
BAG6
C19orf25
PDP1
SLC27A5
MED23
ENPP3
EIF3F
ZBTB45
TRIM69
ZNF670
OAS1
SRI
SARAF
YWHAG
ZNF622
ZCCHC10
TP53BP1
MAP1A
ITGAM
CDYL
TMEM167B
TPK1
AHCYL2