ChIP-Atlas: Target genes

Potential target genes for TRIM28

Query protein: TRIM28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX671999 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
TRIM28's Target genes

◢ TRIM28: Average

◢ SRX065546: 293

◢ SRX065547: 293

◢ SRX10976388: 293

◢ SRX10976389: 293

◢ SRX150671: 293

◢ SRX16676305: 293

◢ SRX16676306: 293

◢ SRX17826856: 293

◢ SRX17826857: 293

◢ SRX17826858: 293

◢ SRX17826859: 293

◢ SRX17826860: 293

◢ SRX17826861: 293

◢ SRX22117740: 293

◢ SRX22117741: 293

◢ SRX22117742: 293

◢ SRX22117743: 293

◢ SRX2059876: BJAB

◢ SRX391683: CD34 Hematopoietic stem cells

◢ SRX1799522: CD4+ T cells

◢ SRX1799525: CD4+ T cells

◢ SRX1799528: CD4+ T cells

◢ SRX1799531: CD4+ T cells

◣ SRX671999: ES cells

◢ SRX672001: ES cells

◢ SRX672002: ES cells

◢ SRX9823127: GM12878

◢ SRX9823128: GM12878

◢ SRX1177903: HCT 116

◢ SRX702138: hESC derived ectodermal cells

◢ SRX702139: hESC derived mesendodermal cells

◢ SRX702140: hESC derived mesendodermal cells

◢ SRX702141: hESC derived mesendodermal cells

◢ SRX4171357: hESC H1

◢ SRX553658: hESC H1

◢ SRX553665: hESC H1

◢ SRX702142: hESC HUES64

◢ SRX1945293: hESC WIBR3

◢ SRX1945294: hESC WIBR3

◢ SRX11220464: HT-29

◢ SRX11220465: HT-29

◢ SRX11220466: HT-29

◢ SRX9977682: HUVEC

◢ SRX1925740: iPSC derived neural cells

◢ DRX402530: K-562

◢ DRX402531: K-562

◢ SRX028591: K-562

◢ SRX028592: K-562

◢ SRX150543: K-562

◢ SRX190305: K-562

◢ SRX5457586: K-562

◢ SRX5457587: K-562

◢ SRX2545063: LNCAP

◢ SRX2545064: LNCAP

◢ SRX2545065: LNCAP

◢ SRX2545066: LNCAP

◢ SRX3474298: LNCAP

◢ SRX3474299: LNCAP

◢ SRX12813813: MCF-7

◢ SRX12813814: MCF-7

◢ SRX1497516: MCF-7

◢ SRX7030916: MCF-7

◢ SRX7030917: MCF-7

◢ SRX7030918: MCF-7

◢ SRX7030919: MCF-7

◢ DRX402534: MYL

◢ DRX402535: MYL

◢ SRX065554: U2OS

◢ SRX150666: U2OS

◢ TRIM28: STRING

FRG2
FRG2C
DUX4
CCDC200
TMUB2
ASB16
ARHGAP39
NOC4L
DDX51
ZDHHC18
CDC34
SMYD3
HIGD1A
GFOD2
GAGE2C
GAGE2B
GAGE2A
GAGE1
GAGE12D
GAGE12H
GAGE12E
GAGE12C
EIF3C
DNAJC25-GNG10
DNAJC25
H1-7
C1QTNF12
LAMA5
GAGE12F
GAGE12G
RAD54L
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12B
NUDT3
XPO5
POLH
PPARD
TCF25
NBPF1
GCGR
CCDC38
AMDHD1
OMP
PCBP3
ELOA2
FAM177A1
GOLGA6L4
GOLGA6L3
COLEC11
SPATA6
PPP2R5A
TBC1D5
ASMTL
TSACC
VPS37C
ZNF329
GOLGA6L10
SNX3
SLC2A11
LRIG2
LRTM2
GAGE8
GAGE2E
GAGE2D
GAGE13
NACC2
TM4SF1
MTFR1
HLA-F
FKBP11
MRTFA
NEU1
VKORC1
BCKDK
AARSD1
RUNDC1
PTGES3L-AARSD1
PTGES3L
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3D
TBC1D3L
NUP93
VN1R4
SHTN1
C7orf50
RPL32
GOLGA6L7
PPIG
FASTKD1
SCGB1C1
ODF3
NAPB
PARK7
H4C11
H4C12
RNASE10
RGSL1
PSPC1
SCARB1
ARL8B
CCS
CCDC87
ZNF595
NPAS1
SIMC1
VPS11
HYOU1
XRCC6
DESI1
HNRNPL
C2CD4C
SPATA22
ASPA
EPN1
SCGB2A2
GTF3C2
SLMAP
FIGNL1
PRR23D2
PRR23D1
CYP1A1
XAGE1B
XAGE1A
PIN4
SRSF7
RCBTB1
C1GALT1C1L
ZNF487
PPP1R3B
TMEM98
SNX11
CBX1
SCGB1C2
SH2D4B
POLD1
SLC38A9
INPP5F
ZNF486
UGT1A4
UGT1A3
FAM86B2
EDARADD
NEFH
ZNF772
CLEC12A
ZNF419
RNF135
TMPRSS6
SPATA2
RPL24
ZBTB11
NPIPB6
TRPV3
GOLGA7B
GTF2A1L
TBC1D3K
TBC1D3F
TBC1D3
TBC1D3E
GAGE12J
INTS9
HMBOX1
TBC1D14
ZNF611
FANK1
DTX2
OR8B3
TBC1D3C
RPL11
ERBB3
SCAF11
FXYD3
MORF4L1
ARHGEF35
MYO5C
ALPL
ZNF84
RGS3
HADH
SDHAF2
CPSF7
NOP14
GRK4
TBC1D3J
TMX2
MED19
LOC102724770
DGCR6
TTC5
CEP350
PTH2
GFY
DBNDD1
CD47
SULT1A4
SULT1A3
SUPT6H
SDF2
NPIPB9
LRPAP1
ELAPOR1
BAGE4
BAGE3
BAGE
CENPVL2
CENPVL1
NPC1
CHRM3
RAB3IP
FAM156A
FAM156B
OR8J3
C2orf69
ALKAL1
DHRS4L2
C5orf34
PPP2CA
PGLS
CENPVL3
FLT4
PRSS41
BNIP3L
SLC25A13
LIMD1
RBM5
RANBP17
YY1
HK1
PPM1D
THOC5
HEATR3
THOC3
SUGP1
MAU2
CCZ1
GMNN
CS
SUMO3
UBE2L3
RIMBP3C
RIMBP3B
PPRC1
LGR6
HORMAD1
BRMS1L
MST1L
VBP1
SLC35F5
TBC1D3B
CHAD
RSAD1
MUC21
NOMO3
NOMO1
SARDH
CHD1L
TTC17
FMO5
DGKE
C17orf67
STX17
MACROD1
LONP1
CATSPERD
CHRFAM7A
TCEA2
TULP4
ZNF665
OR9A4
CLINT1
PSAT1
RAB35
ANKDD1B
RANGAP1
ZC3H7B
PDE4DIP
CRELD1
MKRN2OS
MKRN2
OR6J1
TIGD6
HMGXB3
CZIB
SLC25A32
DCAF13
RFC4
B4GALNT3
ZFP91
LPXN
CCZ1B
CLTA
FIGLA
NOTCH2NLA
PIGZ
FCGR1A
SLC25A18
ZNF396
ZNF843
LOC100289561
DNAJC3
MTMR6
SPDYE6
ULK4
ABHD2
ZNF500
HBEGF
MAGEA8
DLAT
CCNL1
GRPEL1
OR2Z1
RTP3
LTF
RABEP1
LRRC49
THAP10
SLC16A2
PAK2
REXO2
TENT5B
TICRR
FNBP4
PCSK6
MSX2
PIWIL1
TMEM202
THOC2
YWHAE
GALNT10
RPS5
SLX1B
SLX1A
BOLA2B
BOLA2
SERP1
EIF2A
RNF225
ARHGEF5
ANKFY1
LMNA
LYST
MYO5A
ZC3HAV1
NOTCH2NLC
SERPINB1
CBWD5
CBWD3
TADA1
FBXL5
ENO1
GSTT2B
GSTT2
DDTL
DDT
TMEM159
DNAH3
GSPT2
POTEH
CLDN4
METTL27
CMTM3
LZTS3
MOK
COL26A1
SLC15A3
RPS7
ASNS
BTRC
GPR45
PPP2R5C
RPL35
ARPC5L
WDR38
IFI27L1
DDX24
ZNF706
CCN3
SUSD5
TMEM30A
PGBD2
C9orf40
LAPTM4B
RMDN2
PIK3IP1
ACADS
AP3B2
DHX15
OR10AC1
REM1
DEFB124
CTDP1
RAB7A
TEC
CR2
CIBAR1
H1-8
ATP8A2
NCBP3
CERS5
ALOXE3
WDR45
ZNF888
VPS35
GTPBP4
LMLN2
CASC3
MTR
PAAF1
WASHC2C
ECE1
UHRF1BP1
COA4
LYN
NPRL2
CYB561D2
TMEM115
ARHGAP26
USP7
TAF4B
UVRAG
RETNLB
UBE2Q1
CHRNB2
GINS3
PDXDC1
DR1
SLC35A5
ATG3
RAD51D
FNDC8
HERC3
PYURF
PIGY
MAPKAPK3
CISH
TTBK2
CTSL
ZNF346
OR52A1
GRK7
OR52A5
ZNF443
CLPP
ARHGAP19
CRH
C17orf50
FAM86B1
MCCC1
MXD1
ZFP2
LOXL2
NOTO
CREBL2
ZNF28
ZNF680
SULT1B1
SEC61B
ALG2
HMGB1
USPL1
SLC35G5
NAXD
CYP19A1
BOLA2-SMG1P6
SEMA4F
M1AP
CHGB
PLPP5
PTPA
CRAT
PHF11
CALCOCO2
ROPN1
HIC2
IP6K1
GPR89B
ZNF823
ILRUN
TESK2
MMACHC
CCDC163
RUVBL1
EEFSEC
OR14I1
ZNF451
PRKAA1
YAE1
MACIR
TIMP4
COPZ2
POTEB3
JMJD1C
IQCF2
YWHAG
DYNLL2
SRGAP1
UBALD2
CCDC144A
PCDHB2
HNRNPM
PCDHB3
MCM6
MATN2
VASH2
EMP2
MTERF1
ZNF416
ZIK1
SLC25A28
POM121C
PHTF2
CEP135
TMEM60
NAP1L3
FAM133A
TRIM37
ZNF384
PDK2
MON1A
NDEL1
RNF149
SPDYE5
RACGAP1
ADCK1
SGSM3
IL10RA
UBR7
GON7
SCOC
HACD3
MEGF9
GPC3
GGT2
LMTK3
TMEM163
HILPDA
SERBP1
PKP3
PRR20E
PRR20D
PRR20C
PRR20B
PRR20A
WDR36
LHFPL4
PMEL
RAB5B
CDK2
MIS18A
FH
SOCS3
SPDYE13
TPT1
ROPN1B
FAM111B
ZBTB8B
FAM234B
SHISAL2B
ERN2
SNRPD3
GUCD1
CHAF1B
PDGFD
IL17RA
SDHAF1
PACC1
PLCD1
ZNF354B
CEP112
KBTBD8
IPO7
RNF7
APOC1
TMEM63B
MRPL14
DLEC1
SLC5A6
CAD
ATRAID
LRRC8C
UBE2L6
RPN2
MROH8
CFAP206
PRKAR2A
NHLRC1
CASR
FBXO39
CEP126
ANGPTL5
POLD3
ARHGAP28
PLPPR2
NF2
NANOGP8
SRSF2
MFSD11
FAR2
CDCP1
FLNB
CYTH2
PLAG1
CHCHD7
IRF8
RAB31
FFAR4
LRRN4
GOLGA6L6
ESCO1
RNF207
RPL22
IFNGR1
ANKRD36C
C8orf76
TXNDC15
SNX27
FEM1A
ZXDC
ZFYVE27
ZBTB39
NEDD4
INO80
TTC12
HERC2
NUTM2G
KRTAP2-2
KRTAP2-1
KRTAP1-1
SBNO1
CRTAP
SEMA4B
ZNF778
SLC7A6
JAK2
POMK
RMI2
HIF1A
DEPTOR
EIF3F
RABGEF1
ARHGAP9
GMEB2
MACROH2A1
ZNF672
INSL6
ZFP37
NCOA5
KCNJ9
DYNLL1
SRSF9
ALS2
MICOS10-NBL1
MICOS10
RND3
ADO
SPINT1
NT5C3A
ZNF514
TMEM222
DGKQ
RHOG
PSAP
SH3BP5L
TBPL1
STAG3
GPC2
TRPC4AP
TTC9
CD68
MPDU1
LOC100996842
ZNF2
CSRNP1
BLOC1S2
DMTF1
RPS4X
EIF4A1
SOX15
CAPN7
SLC22A5
CWF19L1
GAL3ST4
RPS27L
FAM76A
GTF2A2
FUCA1
USP33
BICD1
TOR3A
DUSP15
PJA1
RIPK4
CBX7
ERICH2
IVD
XBP1
CTNNAL1
PIANP
B3GALNT1
BMP8A
CT47A9
CT47A8
CT47A6
CT47A5
CT47A4
CT47A3
CT47A2
CT47A12
CT47A11
CT47A10
CT47A1
METTL8
DCAF17
SPATA33
MOB4
NOTCH2NLB
LUC7L
FAM234A
S100A2
ALDH3A2
MS4A1
MRPL15
TNIP1
KRI1
CDKN2D
CDH22
POTEB
DPY19L4
ANKRD36
HDAC1
ERCC1
RAB24
PRELID1
MXD3
DNAJB9
NPTN
THAP5
ACO1
CPEB3
ARL13A
GNE
DUSP22
HACE1
RIPK2
ATCAY
SMG1
FIP1L1
MTMR3
ZER1
TBC1D13
ZNF846
RTN4
ATP6V0A1
ANGEL1
STK40
ZBTB43
KCNIP2
GPR146
UBXN4
PJA2
CAAP1
MPI
DIXDC1
DLC1
ORAI1
GMFB
SLC13A3
TRIM15
NOXRED1
C6orf62
NOMO2
PTBP3
GNPNAT1
UBA2
EID1
DNAJC13
SLF2
ABCC6
OPTN
CCDC3
SCYL2
DEPDC4
BVES
HAAO
MAL2
PRRG4
CLDN1
SLC7A2
IGSF8
MGAM
TMEM47
PSMD8
F2RL1
MARS2
UHMK1
STMN1
NODAL
FAM153B
SAXO1
MZF1
METTL16
RRAGA
RASL11A
GOLGA8N
EFR3A
PRR30
PREB
UBD
GALNT3
FBN1
TSKU
SMU1
RTL10
GNB1L
MIER1
DNAI4
USP3
NFYC
TIMM23
FGD4
TMEM263
MND1
CCNT2
LSM6
PPM1A
FARP2
CSNK1D
UCK1
MGLL
COPS3
DUSP3
CFAP97D1
P3H2
CORIN
C8orf34
JPH4
ZNF287
MEX3A
ZNF134
TMOD3
FAM189B
KIAA0319
NCAPG
SCAMP3
NGRN
PPP4C
RASL10B
RAB4B
MIA
GPRIN1
SAFB2
SAFB
RAB22A
C14orf28
UQCRFS1
ICA1
MAPKAP1
SEC16A
C9orf163
NEK5
SYT13
MAP3K2
CCDC136
RANBP6
KIAA2026
ZNF75A
TIGD7
WASHC1
DNAAF2
TTC28
SLC36A1
BTF3
CSGALNACT2
DCAF4L1
GALNT7
MAN1A1
SLC30A9
SH3D21
CST3
KCTD8
BMPR1A
PHC3
RLN2
SCAND1
UBE4B
ARL2BP
TAF5
UNKL
C16orf91
KIF2A
ACAT1
KTI12
NF1
TRERF1
C1orf216
SLC7A1
CFDP1
TEX45
NPAP1
FAM193B
CLK4
TM9SF1
IPO4
SLC25A51
GAS2L3
CEP120
COPS7A
RAB1A
RIC1
CORO2A
IREB2
CTPS2
SLC4A8
GHITM
ARL17B
ARL17A
GALNT6
L3HYPDH
JKAMP
SIRT2
NFKBIB
EFR3B
DDX17
SMARCE1
ANGPTL4
FOXRED2
PPP1CB
POLI
SEC11C
VANGL2
KCTD13
POLR3H
AGO2
RPRM
KCNMB4
NPY
USP44
BICC1
WTIP
PDLIM3
BRSK2
GGNBP2
MYO19
PIGW
ZNF786
SNX18
LRRC58
PCDHA2
PCDHA1
SEC14L2
RNF215
EPC1
MID1
PKN2
AMPD3
SEC61A2
FBXO11
DYNC1H1
RIMBP3
OSBPL1A
ERMP1
PSMG2
COX5A
CEP76
CDS1
AACS
ACTR3B
ACVR1B
MIEF1
MEX3B
TAMALIN
DTNBP1
PODXL
KLHL15
ZNF782
HBZ
GPR26
CTAG1B
CTAG1A
SNX17
EIF2B4
NCKAP1L
ZNF513
HPCAL1
EDNRA
C10orf53
CBR3
PARG
RBCK1
ACOT6
MXI1
RCL1
SNX33
IMP3