ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10131663 | Bronchial tracheal epithelial cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◣ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

INO80D
ZFX
HNRNPR
TCERG1
HEXIM2
MTRNR2L8
FBXW4
ASXL1
MTA3
ZNF783
GTF2IRD2B
KMT5B
DDX17
FLOT1
IER3
RNF220
HNRNPUL1
MT2A
ADNP
NFYC
EIF4G1
HMGB1
EGR1
GTF2I
TRIM52
ZNF280D
SERPINE1
FAM169A
TXNDC15
SNX16
NAE1
ZNF532
NSMAF
SF3B3
COG4
ATF1
ZC3H6
SSRP1
P2RX3
PAIP1
FBXO4
BTF3
COMMD10
PPP2R2A
KDM3B
RPS23
ATP6AP1L
ACTB
HNRNPA3
RAD50
TBL1XR1
ZC3H11A
ZBED6
RPL37A
DDIT4
SRCAP
LOC730183
RBM15B
ZMYND11
ATXN10
ERAP1
SREK1
SCAF8
ZBTB38
SMAD5
ZNF282
LEMD2
PRCC
GABPB2
BRWD1
MRPL28
ZNF444
EIF2D
NEK9
ZNF507
RBM26
R3HDM2
INHBC
ACVR2B
DDAH1
CCN1
DARS1
BPTF
NSD1
ZNF22
UBE2L3
PUM2
C1orf53
LRRC37A3
AIF1
PRRC2A
EPC1
ZFP62
EIF5A
VPS54
SELENOT
STRN4
FKRP
ZNF518A
SDHAF2
CPSF7
RHBDD3
EWSR1
YWHAE
ZNF148
NAA38
CHD3
ELAC1
DEK
RPL13
THBS4
MTX3
PCBP1
FAIM
RANGAP1
ZC3H7B
C4orf36
SOCS6
SNRPB
RMI1
HNRNPK
F3
COMT
TXNRD2
DUS1L
ZNF747
ASB1
SEPHS1
TGFBRAP1
TBCA
ZSCAN12
RDH14
POGZ
TFDP1
EIF4B
ACYP2
ARPP19
RCOR3
KDM5C
RNF214
PCSK7
RPS19
FBXO38
ZC3H4
PPIA
TMEM17
ZNF839
URGCP
URGCP-MRPS24
NNT
MDM4
MTRNR2L2
MSH3
DHFR
RPS5
ANKRD40
RNF135
GAPDH
ZMYM4
EIF4G3
CDC27
CSNK1D
SRRM2
CCDC71
RAN
RIN3
NIPAL2
ZFP64
MIER3
PAFAH1B2
SRSF6
PGGT1B
CHD1
MARCHF6
TEPSIN
NDUFAF8
TOP2B
ANXA2
DIS3L2
PRDM15
PTPN9
RPS4X
ANP32B
SLC24A1
INTS14
LPGAT1
SRSF4
HNRNPF
SPIN1
SMARCE1
GTF3C6
RNASEH2B
ZNF143
TDRD3
TET3
NCOA6
ZNF746
DUSP16
UNC50
COA5
KCTD18
SUSD1
SLC30A5
IDNK
RAD23A
RPS14
SOX6
C11orf58
FOXK2
NFKB1
DNAJC11
RPS7
CTPS1
HDDC2
CCDC102A
STK24
CKS2
ACBD6
VWA8
NAA25
CDC16
CLPX
SENP6
GSAP
LRRK1
CSNK1E
ZNF76
SETD2
SFXN1
CCN2
NLRX1
STAG1
NFKBIA
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
C17orf75
PARP8
HNRNPAB
EIF3A
KIAA1191
ARL10
ZNF131
AVEN
EEF1A1
UQCRH
LRRC41
REPIN1
BEND3
PTBP1
OCIAD1
ZNF562
NFIC
GMEB1
RAD23B
TASOR
ARPIN-AP3S2
ARPIN
UFC1
SLC9B2
ZNF292
SDF4
B3GALT6
SEPTIN8
MSL1
PRTFDC1
KAT6A
HDGFL3
KMT2D
ZCCHC3
PRRC2B
JMJD1C
S100A13
CHTOP
SLTM
ZNF236
REEP3
MYH9
AGPAT3
GPSM3
IMPACT
PBX2
H6PD
ODC1
MATR3
UIMC1
BRD7
TLK2
ZNF101
ATP13A1
GTF2IRD2
ZNF777
NME1-NME2
NME1
TCTE3
ERMARD
TM9SF4
DNAJA4
TUBGCP3
ZC3HAV1L
GABPA
ATP5PF
MACROH2A1
RCC2
GPD2
SLC7A1
UBE2E3
TNPO1
EIF4A1
RPL5
DDX50
GBA
VDAC1
RANBP1
TRMT2A
GLUL
SMNDC1
NUCKS1
HMGN2
BCL7B
XPO7
CIPC
SQSTM1
RPTOR
RPS6
PCIF1
GMEB2
C7orf26
ATIC
CNIH1
YBEY
MCM3AP
ZNF274
NUFIP2
RACK1
KRCC1
HINT1
CPLANE1
NSMCE4A
CCNJ
ZKSCAN7
RBM33
YARS1
S100PBP
TMEM106B
ZNF428
ZNF346
ARHGDIA
SYNGR2
ZFR
USP24
FABP6
C5orf51
DCPS
CANX
UBAP2L
C1orf43
MCCC2
PTBP2
RPS3
DIS3L
CCAR1
WDR43
INO80
SCLY
HDGF
UBE2J2
ZNF407
NUAK1
AKAP10
GPX7
MAGI2
DCAF8
TSEN15
SIL1
RAC1
MPDZ
NRF1
SMC3
DYNLL1
HMGCS1
BAZ1B
SRSF9
ZNF787
KIAA1614
C1QBP
DYRK1A
AIG1
RGPD1
RGPD2
DENND6B
PHF13
KANSL1
TENT2
UPF1
SLC25A6
QSER1
RDX
H4C12
ELOB
TMEM62
HECTD1
SFT2D3
KDF1
METTL15
KIF18A
SUCLG2
RPL29
TARDBP
SOCS5
PCNP
ZNF354B
CHURC1-FNTB
CHURC1
ECPAS
SUMO3
NPEPL1
RNF169
ABCB10
VPS16
PCED1A
AMPD3
EZH2
PPP3CC
SRSF1
ZC3H7A
NAB1
FOSL1
MAML1
PAN3
SLC25A46
CUL1
STS
PUDP
MRPS2
C9orf116
ATP5F1E
RPL3
SCMH1
GALR3
CLCN7
MARCHF7
SUMO2
RCC1L
PHC3
FBXO7
LOC107984974
FKBP8
CHADL
MTMR2
KMT2B
MCL1
CREBZF
NFYB
RAD21
KPNB1
ATF4
KBTBD3
AASDHPPT
ZBTB17
KDM2A
NDRG1
LARP1B
PHF11
SNRNP35
ATXN7L3B
SKIDA1
DCP1B
TXNRD3
RPS15
FAN1
C1RL
PHIP
RPSA
BCL2L13
WDR37
USP37
CNOT9
RAB11FIP2
RAD54L2
ERBIN
IRF2
RUFY1
TUBGCP5
MICOS10-NBL1
MICOS10
HENMT1
MRPL48
SNX19
NAPEPLD
TLE5
MANSC4
KLHL42
ZNF764
EFEMP2
HUS1
OBI1
EIF4H
ZBTB47
TACO1
TRMU
CNBP
GATAD1
CACNB1
RPL19
PNMA8B
CTCF
DCTD
TMEM268
BRD4
AGMAT
SMAD4
EPC2
POU6F1
ATP5MF-PTCD1
ATP5MF
ATP6V1G2
NFKBIL1
DDX39B
FAM160B1
PPP4R3A
EIF4E
UBE2Q1
C5orf24
PHF3
MAN2A2
MRPL19
C19orf12
FAM160B2
COL23A1
ZNF358
ITPRIPL2
BRIX1
ZNF326
PABPN1
TLK1
TAF4
LTV1
RPL32
CYB561
SIPA1L1
TMCC1
B3GNT5
HDAC2
DHX15
MFSD14A
MYBPC3
MTMR10
NDFIP1
BMS1
RPS3A
HNRNPL
ILF3
ZNF398
UCK2
REV3L
UBC
TMEM94
RC3H2
USP40
IMMP2L
REXO4
ADAMTS13
PHC2
OBSL1
INHA
ZKSCAN2
SKP1
C9orf64
PRADC1
CCT7
ITGB1
KEAP1
MAP3K20
COX7C
SREK1IP1
CWC27
MAP2K2
SLC20A1
WDR82
ATN1
ZFP2
P3H4
FKBP10
NACA
CRADD
MRPL23
DPY19L4
PCBP2
RPL21
MPPE1
ACSF3
ITSN2
MCMBP
PRR25
VPS4A
CERS2
IAH1
NIPSNAP2
PPAN-P2RY11
PPAN
ANGPTL6
VAPA
POLR2M
RNF6
EIF3B
DPYSL2
P2RY11
IQCG
ZNF770
TBC1D5
RPL35A
BOD1
ZNF384
MORF4L1
SMIM10L1
PRH1-TAS2R14
JPT2
MACROH2A2
GABPB1
DEDD
G3BP1
RPP38
TRIM44
PRDM2
PCBD2
DCAF10
H2BC15
H2AC15
ZNF341
PPP6R2
ZNF619
RPL12
LRSAM1
SAR1B
RPS15A
TRNT1
MSRB2
PIP4K2B
DRAP1
C11orf68
ETAA1
RPL37
TPT1
KMT2A
JAGN1
CASD1
MRPL21
IGHMBP2
NSFL1C
MTHFD2L
PEX7
SLC22A5
SRSF11
SNRPD1
HSPA9
HSPA8
NFKBIZ
RPL9
LIAS
ZBED1
DHRSX
MRPL39
GADD45B
TEX22
FAM228B
STOML2
RNPS1
RPL35
ARPC5L
PFN4
EEF1AKMT1
SGCE
PEG10
DDX6
INTS2
BRAF
NCKAP1
DAZAP1
ZNF496
DHRS12
SETD7
DHX30
HMGA1
RCN1
RPL17-C18orf32
RPL17
C18orf32
TTC17
ING5
ZNF768
ARRDC3
TBRG4
ODF3L2
PLEKHM3
ANXA4
RFX8
CENPV
TAPT1
PFKM
SENP1
AFG1L
ZZEF1
CYB5D2
DENND4B
BFSP1
BACH1
DRAM1
KCMF1
B4GALT7
RPL11
AFG3L2
ZNF70
VPREB3
PTPN21
CLIP4
MAN2C1
XBP1
COIL
TUT4
PIM3
COX16
SURF4
D2HGDH
EEF2
TAF15
ATE1
HNRNPD
MYH7B
GSS
KLHL9
DERA
EPM2A
CTSZ
USP30
HNRNPU
VPS36
CKAP2
CPSF6
PICK1
SRSF10
TTI1
RPRD1B
RITA1
DDX54
CBX8
TCF7L2
FAXC
DDX1
ACTRT3
RFX3
USP47
TTC3
PIGP
CTSO
UCK1
RPL27A
CAPZA2
SDC4
NOXO1
GFER
HHIPL1
HOXB8
BEX3
HOXB7
KRT17
GIGYF1
SUMF1
PLEKHA1
ZNF717
RAB1B
OMA1
DAB1
FBXL5
SREBF2
EGFR
MTA1
COMMD1
CCT4
LDAH
GTPBP4
RBM12
CPNE1
CHMP6
ZNF518B
ELP5
CTDNEP1
SSBP2
DYNC2I2
MMAA
EP300
VAMP2
TUBA1B
UHMK1
TIAL1
SNX5
MGME1
FBXW11
CCDC97
RPL38
PET117
KAT14
CSNK1G3
EBAG9
FBXL17
SORBS3
PRKAA1
ABTB1
SNX17
EIF2B4
EXOSC6
CIZ1
ARSB
PPRC1
SNRNP70
THUMPD3
TK2
CKLF-CMTM1
CKLF
GGACT
NELFCD
PDXDC1
TMBIM4
PPIP5K2
GIN1
ZNF621
CCNG1
LIG3
PHF19
SECISBP2
COQ9
CIAPIN1
CCNT2
GTF3C3
LZTR1
LRRC47
MAN1A2
BCL2
IRF2BP2
SMAD1
KATNAL2
PIAS2
MTRNR2L1
GDI2
FAM98B
SETD5
DDX19B
AARS1
PSMD14
AGO4
GSTA4
ALKBH3
TCF12
ADO
RBM27
RNF44
ZNF319
USB1
MMP14
PRRC2C
SMARCC1
SMC1A
RIBC1
EMB
ECHDC2
RPS8
ZBTB7A
PRKAR1B
SPOP
RYK
ZNF296
GEMIN7
ANP32E
IREB2
PPP6R3
NINJ2
ZNF629
MGAT4B
MICU2
ZNF302
ACBD3
WDFY3
SMARCA4
LACC1
CCDC122
CDV3
EPHA2
FJX1
ANKRD65
CKAP5
DENND1B
TMEM185B
PGAP4
FRA10AC1
USP21
PABPC4
CLK1
CDC7
IQANK1
USP25
FAM83H
ZNF862
PFDN4
NSRP1
MMADHC
GPATCH4
POLE2
KLHDC1
TUSC1
PRELID3B
AGO2
CDC42EP1
MKLN1
NAA60
DMTF1
DUT
NHLRC2
DCLRE1A
YEATS2
UNC119B
RPL22
SPRED1
ZBTB8OS
RBBP4
RUSF1
MTRR
FASTKD3
UQCRFS1
ANP32A
ZFP36L2
AKT2
PATL1
CXCL1
SNX9
MTMR1
DNMT3A
RBL1
NKIRAS1
RPL15
ZGPAT
ARFRP1
WAPL
H4C11
EXOC3L1
E2F4
BNIP1
DHX36
GCFC2
AP3D1
STX17
ARHGEF7
ANGEL1
ATP6V0A2
GALC
LMO4
SCRN1
ATXN2
VPS13B
SP3
NFAT5
TCF20
TBKBP1
DENND2D
WSB2
TRIP12
FBXO36
RPL10A
POLR3E
TMA16
MAP2K1
SPG11
TMEM168
LSM14A
PRDM5
AGK
CELF1
TANGO6
SLC35D1
ZNF785
PTPMT1
SMPD4
MZT2B
SRM
SPAG6
SRC
XPO4
XPC
LSM3
SLC35A3
CLN5
HIF1A
ZYX
FAM131B
ZFYVE9
MANBAL
PRMT3
ZFP91
LPXN
ZNF830
CCT6B