ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX367328 | 293
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◣ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

SRSF7
HEXIM1
JPT1
SRSF2
MFSD11
JUN
ZBTB45
TRIM28
PPM1D
CDC25C
FAM53C
H3C15
H3C14
H2AC19
H2AC18
ZBTB4
SLC35G6
POLR2A
RPL5
RPL3
NGRN
H4C15
H4C14
RHOB
ID4
ILF2
C15orf39
EIF4G2
CIRBP
HNRNPAB
TUBA1B
FUS
SFPQ
PIK3R3
HSPA1B
C12orf65
BCAR3
TAF4
KLF6
THADA
SRSF6
TRA2B
POLG
H1-10
EEF1A1
RSRP1
FARSA
CALR
ATF4
PPP4C
ZC3H10
RPL41
RSPH3
RPLP1
JUND
PRDX1
H3-3B
UNK
EIF4A2
CDH11
SND1
SLC38A2
ZBTB37
COQ8A
RCC1
NCOA7
DDX5
HNRNPH1
INTS6
DUSP1
SOD1
TPI1
YWHAE
GTF3C6
RPS14
GTF2H5
SRCAP
LOC730183
RPL13A
TRAF7
HNRNPA2B1
CBX3
TMEM242
SETD5
KCTD13
INTS2
WDR1
GNAI3
SIRT4
SESN2
COQ2
FAM219B
SEPHS2
PABPC4
GBA
RPS8
H2BU1
H2AW
ECI1
KNTC1
NUP133
CITED2
EIF4A1
TFRC
UBB
EIF5
FBXL3
EEF2
RPL11
NKIRAS1
RPL15
DNTTIP2
BTG3
CZIB
AAAS
UBE2S
RNF151
RPS2
ACTB
PIP5K1A
NOL11
NASP
ZNF143
STMN1
DLG2
CBX5
HNRNPA1
SNRNP48
FSCN1
MRPS18B
ZBED8
OAZ1
E2F3
CALM2
MYLIP
LTA4H
MTRNR2L1
SRSF1
SLFN11
MAT2A
BAMBI
IDH2
TOB1
SMOC1
TP53BP2
RBM26
C19orf48
PRRC2B
SRSF5
SPECC1L
RNF220
POLE4
S100A13
CHTOP
NDUFV3
SCAMP2
RRP1B
HSF2BP
MAPT
LUC7L
RPL6
EFCAB2
PPIA
NFYC
HMGN2
TUBD1
RPS6KB1
NOP14
GRK4
C16orf72
TUBB4B
SIPA1L1
DPP9
SF3B4
HSP90AA1
HSDL2
PSRC1
SOD2
WTAP
WDR74
ITFG2
TMEM107
DDX17
SLC1A5
UBC
EIF1
ARIH1
MTHFS
B4GALT3
NUP214
NABP1
ATP5PO
TBCE
RPL31
PSMC6
TSPAN3
POLR2J3
KIF5B
MTHFD2
CACNB1
RPL19
ABCA5
LUC7L2
FMC1-LUC7L2
FMC1
LSM14A
LOC105378979
LAP3
BBC3
TIA1
HINT3
RBM12
CPNE1
ALOXE3
HES7
MESD
DEGS1
MKNK2
HSPA5
DCPS
DGCR8
GADD45A
XBP1
ALDH3A2
MCMBP
MTRNR2L2
MSH3
DHFR
CHRNA5
MORC3
ZDHHC4
DYNLL2
RPS15
LIN9
YBX1
FAM200B
BTBD10
SDHAF4
HEXIM2
DCAF8
WRAP53
TP53
RAB11A
VAMP1
SRSF3
UGP2
UGCG
DHX9
EIF4A3
PKM
AFF1
TRAF4
DLX1
GDI2
SRRM2
TGOLN2
H4C1
H3C1
H1-1
CDK1
AMD1
AGL
FAM71E1
EMC10
OAZ3
MRPL9
NCL
ALDOA
ACTRT3
CHEK1
C1QTNF6
TAF1D
C11orf54
RPP25L
CFAP20DC
CALM1
ACAD9
MCL1
SACM1L
GLUL
TM2D3
DHRS12
RNPS1
ALDH7A1
H2AX
TAF15
SNX3
TAOK1
ZNF771
YWHAQ
ESR2
ULBP1
YWHAG
RBM25
KLHL11
SMYD4
RPA1
PHF10
FZD8
C6orf62
COMMD4
GGA2
RNF122
MTF2
THOC3
ZNFX1
GORASP2
HDAC1
TRA2A
BLOC1S5
IMPDH2
BORCS5
ARPC1A
HNRNPDL
ENOPH1
KLC1
RCBTB2
CENPH
NCOA5
PARP16
USP10
ASCC1
ANAPC16
H2AZ1
DNAJB14
MSH6
LRIF1
ID2
RBBP6
WBP11
C12orf60
HSPA1L
HSPA1A
TXNDC15
RNF146
NCAPG
MAPK3
MICU2
POLR3E
PMF1-BGLAP
PMF1
RPL37A
LENG8
GANAB
PSMA3
CEBPA
MAP3K21
NUDT1
MRM2
SPTAN1
TMED4
MTRNR2L8
H2AZ2
UFL1
BRD2
TSC22D2
ATP1A1
NXF1
ATP6V1G2
NFKBIL1
ZSWIM7
TTC19
IER5
DDX39B
AMZ2
MSX1
BCLAF1
RPSA
USP1
IFIT3
ADPGK
HERPUD1
SP1
DYNLL1
GGPS1
ARID4B
CDK12
SRSF9
TEX30
RPL24
SOAT1
SLC22A4
HDHD3
RPL22L1
SLC20A1
PUM2
CLSPN
HFM1
BUB3
MTF1
PUM1
EXOSC9
EPC2
WDR35
NGB
HACD3
ING3
MTMR2
NEK4
EZR
PCIF1
PTPN6
C12orf57
FDXR
ATF3
RGPD1
RGPD2
CKB
UMPS
RPL13
ADAM17
ZWILCH
RPL4
HMGB2
UCHL1
TRIM7
MESP1
PPP6R2
TCTE3
ERMARD
DNAJC25-GNG10
DNAJC25
LRCH3
VPS72
CLN5
GLS
MANF
RPL10A
SLIT2
ISL2
IL4I1
NUP62
ATF5
FTL
DNAH14
ZBED4
NDEL1
PHGDH
INTS7
DTL
PPY
SEC31A
ARF6
DDX19B
AARS1
RTL10
GNB1L
THAP9
MRPL17
HINFP
TMEM63A
RPL29
PABPC1
KANSL2
THUMPD2
DPY30
FBF1
EPC1
ZNF830
CCT6B
UBA2
ANKRD13C
PRMT2
TARS3
DMWD
CSNK1E
TSNAX
TTLL12
DDIT4
TUBGCP3
PMPCA
ENTR1
SIL1
MAN2C1
HSP90B1
MFSD14A
ZCCHC17
SNRNP40
RPAP2
GLMN
CBY3
ZBTB25
ZBTB1
SLC16A1
BOD1L1
HIRIP3
HNRNPR
PCBP1
CHIC2
ZMYM1
HOXD13
TLE3
TMSB10
PIGF
CRIPT
COX20
ADAMTS1
GNA13
CSRNP2
RPL12
LRSAM1
CD164
EXOC7
BPHL
TUSC1
RAP1GDS1
MSRB2
RPS7
PRADC1
CCT7
DNMT1
TMEM39B
COMMD6
ZNF627
FASN
YWHAH
PELP1
ZBTB2
BTG1
MRPS21
ZYG11B
FTH1
ZKSCAN2
ATXN2L
RPS19
NUP188
DOLK
HSPA8
SLC25A3
CASP3
RBMXL1
KYAT3
DHX15
PRKACB
SLC5A3
MRPS6
CYCS
CCDC137
POLR2J2
SLC35E2A
SOX4
POLR3B
EPM2A
LRRC37A3
RPL7A
MED22
PDSS2
ADM
PHF14
FAM89A
ACTN4
MCM5
CPT2
SETD9
PTMS
SLC25A19
TAOK2
C7orf25
TOMM20
RBM34
AKR1A1
ZNF131
USP25
MATR3
URB2
TAF5L
MACROH2A1
STT3B
PIP4K2B
ATP2A2
SLC3A2
SLC7A5
NEFL
TOB2
KHDC4
CANX
HES1
VPS37B
MIF
CANT1
SRP68
GALR2
ING5
PAN2
IL23A
MAGI3
SCAF4
FAM117B
AKAP7
MRPL40
HIRA
SLC26A2
GCN1
YEATS4
SLC25A4
NSUN4
USP38
TTC32
TEX14
RAD51C
SMURF2
HSPA6
MYL6
MED11
DNAJB1
ARL1
C22orf39
C15orf61
IP6K1
REEP5
ATXN7L2
ZFAND5
SAE1
SUMF2
SRSF4
GPATCH3
CSDE1
PRPF38B
CDC20
BORCS6
CKS2
MCM7
AP4M1
SLC33A1
TBC1D22A
TM9SF4
SZT2
MED8
SLC39A10
COPS6
PRDX3
EZH2
SREBF1
RPL9
LIAS
RBM8A
RNF149
PPP1R8
RPL23
CLNS1A
H4C8
OSTM1
ILKAP
NAV2
SMIM13
MPI
ARL6IP1
LUC7L3
MDM2
BCAS4
ADI1
RPS15A
NTMT1
NCKIPSD
RPS3
SLC35F5
LDHA
DNAJC27
ERO1B
GAPDH
TCAIM
H4C3
H1-6
NT5DC1
USP24
TIPIN
RASSF1
MOB4
LATS1
BCL2L13
TRIM13
SLBP
CSE1L
IFNAR1
TBC1D2B
CDKN2AIPNL
RANBP2
EIF3A
SLC16A10
MBOAT2
PRPSAP2
ZNF589
NARF
PSMG3
STIL
MAP3K3
UCHL3
KEAP1
C21orf91
OLA1
PPP1R27
MCRIP1
TRIM65
UHRF1BP1L
ANKRD31
DCAKD
RPLP0
PYCR2
PRPF4
CDC26
MAP4K1
EIF3K
ZDHHC14
NSRP1
THNSL1
MEF2A
GTF2A1
UBE2Z
ZC3H4
PARN
BFAR
ACACA
FOXO3
TADA2A
SLC25A11
RNF167
NDUFS7
H2BC21
H2AC21
H2AC20
XPO1
ENO1
HACL1
BTD
BMP2K
ALG6
TBC1D4
POLE3
C9orf43
UBAP2L
C1orf43
IREB2
BLOC1S4
CARS2
POU4F1
SNRNP70
USP39
C2orf68
SEC14L1
THOP1
SGTA
CD320
NBPF1
EIF3L
ANKRD54
GABPB2
HASPIN
PPP6R1
MRPS14
SQSTM1
TMEM116
ERP29
SMARCC1
ZSCAN12
ENAH
H4-16
H2AJ
NUCB2
NAXE
UGT1A3
KMT5B
PITRM1
PCDH9
TNRC6B
ARL15
SELENOW
FARP2
LZTR1
C10orf143
TNKS2
RACK1
SRRM1
DIS3L
SP2
IPO7
FBXW2
TOE1
MUTYH
MSTO1
ZNF326
ANXA11
LYPLAL1
FAM133B
PMPCB
MRPL35
IMMT
MVK
EXOSC10
CNOT11
NPM1
PCGF6
HEATR1
SF3B1
PSMA4
ZC3H6
DIP2A
MRPS15
SPRYD3
ADIPOR2
RPP38
MAP2K2
TRIM26
HYLS1
GEMIN4
RNF130
VIM
CCSER1
TBX2
MRPL39
BTBD1
DDX6
RNF135
VARS2
OSCP1
SIN3B
TIMM44
ZNF574
VPS36
CKAP2
TIMELESS
TRAP1
HMGN1
MUC1
RBSN
RPS13
RPS27
RAB13
NUCKS1
HNRNPU
UBTD1
MMS19
PRRC2C
ZFP36L2
HNRNPD
MYDGF
TRIM25
MICOS10-NBL1
MICOS10
TNFRSF10B
TMX1
CSK
CWC25
ZNF839
CDC6
SLC25A36
RPS24
POLR3A
THAP6
INTS3
SNRNP25
POLR3K
RPF2
GPX4
CDR2
ZNHIT6
TXN
PPP1R12C
USP48
C2orf42
C16orf95
FAM162A
CCDC58
FER
SIRT1
PRMT5
PCMT1
RASA2
RPRD2
TNIP2
AUH
PUS7
WNK1
PTBP1
PSTK
TNPO1
TPRA1
MCM2
ZNF282
ZDHHC7
RNF19B
TARBP1
KAT7
TMEM128
NRDC
METTL23
JMJD6
BSG
SERTAD2
KNL1
ZNF565
ZNF146
POLD2
SMARCB1
STRAP
CCNL1
RAD52
JTB
RPL27A
SCN11A
WDR48
USP40
SLTM
RFWD3
MAP2K7
TMEM50B
STXBP4
COX11
RNF10
ZBTB24
NELFCD
NETO2
PARK7
DNAJC9
XRCC5
CCZ1B
UQCRH
LRRC41
COIL
B2M
AUNIP
RERE
TCERG1
EEF1E1
HACD2
SELENOT
ANGEL1
PIM3
MPV17
UPF1
CNKSR3
TXNRD3
WBP2
RPL17-C18orf32
RPL17
DR1
STARD7
TECR
MPZ
SDHC
MGAT1
DARS1
YLPM1
KIF23
CTH
CGN
RBFOX2
PFKL
CYP51A1
FDPS
RPS12
MARCHF7
GNPAT
C1orf131
PDHB
RPS10-NUDT3
RPS10
ZNF84
H3-3A
LNPEP
CPD
CCDC88A
PHIP
MRPL3
PDCD4
HNRNPA3
RBM4B
HLCS
SGK1
TIMP3
PTPN18
AKIRIN2
RPAP3
TMED7-TICAM2
TMED7
ADSL
SDF2L1
H4C5
RUFY1
CNTLN
C5orf34
SET
TBP
PSMB1
NOP2
SYNCRIP
STK11IP
COP1
TNNC1
GALNT2
NISCH
MAFK
CALCOCO1
SSU72
ELAC2
MRPL53
DDX59
SGF29
PSMB2
BTF3
OAT