ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10144543 | Kasumi-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◣ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

OSGIN1
TNK2
GSDMD
PPP1R18
CPXM1
UBE4A
GTPBP6
INKA1
LGR6
AUNIP
MEF2C
LEPROTL1
FABP6
TMC6
TMC8
LYL1
NME1-NME2
NME1
TBKBP1
CYB561
LOXL2
UCN3
NKX6-3
TMEM275
CTRC
FAM107B
NUF2
FMNL1
RNF166
VAV1
DPY19L4
BMS1
NIBAN3
NFRKB
IREB2
DRC7
EVPL
CCL3
CCL3L3
CCL3L1
CSF1R
MTRNR2L1
TNFRSF1A
MUC6
OLFML2A
TMIGD2
FSD1
RPS6KA1
PRRC2B
FRA10AC1
TMEM104
NAT9
NEK6
SBK2
KLF2
NINJ2
SMG8
MRPS18C
HELQ
ACY3
OLIG1
C3
ARHGAP25
CDK9
SH2D3C
DCAF10
ADAP1
GNAI2
MYO1G
CRYAA2
CRYAA
KCNK9
TACO1
TOR1AIP2
TOR1AIP1
CBFA2T3
RNF220
DGCR6L
MMEL1
GSX2
CLIP3
CLEC5A
SIPA1
GP6
CENPI
NDUFS3
KBTBD4
RAB37
NBEAL2
NFE2L2
OPRL1
RGS19
SUN2
CYTH4
SLC24A1
INTS14
GTF3C3
SAMD11
ZNF595
FGGY
TEAD3
IL16
NDUFS7
HNF4A
CACNB1
SMIM33
POTEH
CCDC149
CRH
RXRA
PRAM1
SHANK3
NSA2
GFM2
MAPK6
LTB
LST1
INTS12
GSTCD
CLEC11A
SHANK1
SEPTIN9
NEDD9
FAM207A
MADCAM1
GTF2H2C
GTF2H2
GPAA1
EXOSC4
NDST2
STXBP4
COX11
SLC39A4
CPSF1
CSRP1
GSN
CACNG4
SIGLEC5
CSK
STX16
C17orf75
PRRG2
NOSIP
FCMR
B4GALT7
RAG1
TRAF6
ADA2
SLC18A3
CHAT
GTF2H2C_2
DUSP7
EXT1
SNRPB
LYRM1
DCUN1D3
SPN
GBP3
WDR97
MAF1
GRK2
ARPC3
RARA
ARHGDIB
DUX4
ZNF565
GRPEL2
GPX4
TOP3B
ZNF792
PHC2
PITPNM2
CCM2
LMO2
DUS1L
LY86
WDR36
BCL3
FBXO11
SH3BP2
FOXI1
LIME1
SEC14L1
CELF2
SERPINB9
MYO18A
POTEJ
MITD1
POPDC3
RASGRF2
TEFM
RHOF
MC1R
PALD1
C8orf58
CCAR2
KLHL20
DGKZ
WDR11
CNPY3
CDK5RAP1
IPO4
NR1H2
CD33
TGM5
AHDC1
RNASET2
SKIV2L
NELFE
UNC13D
SCGB1C2
VPS9D1
C1QTNF4
SSBP1
HBEGF
SLC39A3
ADAM10
FGF7
STAB1
RORC
NTMT1
UBE2J1
FLI1
NPEPL1
MMRN1
NFKB2
PPIP5K2
GIN1
LPIN1
PYCR3
CLEC4E
ERLIN2
ANKRD40
RMDN1
ZNF165
WDR55
IKBKE
IL17RE
CA12
ANAPC5
ARAP1
STX1A
WNT7B
ACBD5
ARSG
SLC16A6
EMID1
GNG2
NR2F1
HOPX
BAZ1A
SYNJ2
BID
RCSD1
STXBP5
LRCH1
KISS1
INAFM1
EMILIN1
ZFHX3
ASS1
PPIAL4G
CD300A
RAB3IL1
MN1
P2RX1
SIRPB2
TUT1
LIMS1
SNUPN
STAP1
SPAAR
CNPY1
AURKAIP1
DNAJB6
CCL4L2
WNT10B
ADRM1
MAP1LC3B2
GIMAP1-GIMAP5
GIMAP1
HHEX
KCNN4
RAD54L2
CD82
TFF3
UTP3
SLC33A1
EDC4
MNAT1
PLEC
LINGO1
TLCD5
WDR74
TSPAN10
NPLOC4
THUMPD3
ANKRD13D
GATA2
S100A9
PSCA
MPO
NT5C2
PXK
DR1
PCNX3
MAP3K11
ZNF221
GREB1L
RAB24
PRELID1
KBTBD2
ARHGAP30
NAPRT
MROH6
LHX6
HDC
AP3S2
COL23A1
DMAP1
PROSER1
NHLRC3
ITGA4
SEC14L5
S1PR4
NABP1
USP3
TBXA2R
CXCL2
OR4K3
OR4K2
TRIP4
IFIT3
SERPINA1
NFE2
FASLG
TCIM
SLC16A3
SH3TC1
SLC43A3
TP53I11
MTMR9
UBXN8
ARHGAP4
LAPTM5
SLC22A16
AZU1
PLPPR3
TMPRSS9
LPIN2
LAMP1
TATDN3
NSL1
MRPL40
HIRA
NUP54
MRPL1
TRAF3IP3
TBX2
LMBR1
COLGALT1
CHRNA1
TMCO2
PHB2
GALK2
COPS2
BTBD19
TCTEX1D4
PRLH
SCAMP2
PPP1R27
MCRIP1
MRPL21
IGHMBP2
HIF1AN
SLC44A1
ADORA2A
MREG
ANPEP
ISLR
LINC01638
NDUFC2-KCTD14
NDUFC2
PPP1R15B
TRIB1
SEMA4B
LILRA2
ALDH8A1
GTF2H3
EIF2B1
GMCL2
CLTC
CHCHD2
MYEOV
CXCL1
TFAP2E
ELMO1
TXLNB
SPOP
MLXIP
RASAL3
PSMF1
ALG10B
RAB7A
CYREN
MAPKAPK3
PSD4
ZNF467
ACOT11
SELENOH
PTPN6
C12orf57
ZNF408
ARHGAP1
LAMTOR1
TMIE
ALS2CL
BDNF
PTGR1
COQ3
ZBTB45
SIRT4
TRMT6
MCM8
RPS14
MYL12A
LSM4
INTS11
CPTP
MFNG
TAS1R3
TMBIM4
FERMT3
ZNF391
TBC1D10C
PPP1CA
SPATC1
CHRM3
TBC1D19
TAF12
COX16
ATG16L2
TMEM154
RPL29
AGK
VPS25
JUP
PDLIM2
MEIS1
CRACR2A
IFITM2
ARAP3
PSTPIP1
TTR
DHRS7C
MMP9
ARHGAP28
LSG1
PLCXD2
FLOT1
IER3
NOXA1
MAP1S
TBC1D3K
TBC1D3
RHOG
RAG2
IFTAP
IPCEF1
GYPC
TMEM72
KNDC1
HDGF
TNFSF9
HPCAL1
CCN4
POTEM
GNPDA1
ZNRF3
GHRL
TMA16
ZNF570
ZNF569
CTU2
ARHGAP45
RGS14
PPP1R9B
TSSC4
SDE2
SIGLEC9
OSM
CCDC77
KDM5A
TUBGCP3
C10orf88
MRPL38
TMEM222
STYK1
CCDC170
CABP1
HPN
SELENBP1
AIF1
PRRC2A
PPIL3
NIF3L1
SEC22B
CSF2RA
ZER1
CASC3
ING4
KCNAB2
NFKBID
HCST
PIK3CG
RASSF2
TYROBP
SCNM1
LYSMD1
GOLGA3
PSD
FBXL15
EIF1AD
BANF1
CCDC71
RGL2
NHLRC4
INPP5D
KLHL6
CXorf49B
CXorf49
PRR35
GNG14
NIP7
COG8
GBA
ARL11
PADI4
ZNF384
ANXA2R
ARL6IP4
CARMIL1
C1QTNF1
LIMD2
TM6SF1
KMT2D
MRPL39
BRMS1
MAML3
PARG
GRB2
CSRNP1
SPTBN1
UNC5B
RUNX2
GMFG
KCNQ5
TSNAX
YIPF7
CFAP410
FARSA
CALR
PUF60
KLF5
PRUNE1
MINDY1
MCMBP
ATP6V0A1
CDYL
PPIAL4H
PTPN7
PLEKHN1
RNASE2
CSF3R
DCAF12
RRP12
PIGV
AKNA
KIAA0513
TAGAP
MS4A3
UBE2V1
ST3GAL1
AOAH
TRPM6
DCP1A
MDM4
TOB1
ATP6V1G2
ZMPSTE24
NFKBIL1
ZDHHC6
VTI1A
TTYH2
PPIAL4A
FURIN
RASGEF1A
CCNC
CHKA
AK1
FERMT1
PARVG
TNFSF8
MAGEF1
SH2B3
MXD3
PEX12
TSPOAP1
DUSP6
ADGRE1
BCAR1
TMIGD3
ADORA3
MRPL58
NR1H3
ACP2
PLD1
LAIR1
RAC2
UNCX
CRHR2
IFITM10
PHGR1
MTRNR2L8
MAK16
PODNL1
FKBP1A
TM7SF3
BMF
PPP1R35
ETV6
RUNX1
ARHGEF18
SLC26A11
SGSH
APBB1IP
OPA1
IPPK
RAB18
PPIAL4C
SUCNR1
IL18RAP
CD7
STX18
SLC66A1
AKR7A2
CSNK1G2
AGRN
NCF1
SF3A3
EMP3
MRPL16
CCDC114
MTPN
LUZP6
ULK4
C3orf86
DUSP22
HNRNPA1L2
GLRX
PPCDC
CSMD3
KCNIP1
C12orf71
ALG10
DOK7
STXBP2
CHST12
TRAF3IP2
B3GALT5
AVIL
SIGLEC15
FTHL17
IPP
MIS18BP1
LKAAEAR1
SLA
KLF3
SNX17
EIF2B4
NOP16
HIGD2A
TTC26
SQSTM1
GCNT1
EPB41
PLEKHO1
CCDC187
IGSF21
GABPB1
TES
PLEKHG3
TGIF2-RAB5IF
TGIF2
PDE6D
COPS7B
H4C11
USP15
INTS1
REXO4
ADAMTS13
TMEM101
ITGB3BP
EFCAB7
KRR1
METTL15
KIF18A
HNRNPF
ETHE1
SEH1L
EIF3H
CD1C
FCGRT
LPCAT1
PLEK
ELFN2
CAMP
ADRA1A
SLC13A5
PVALEF
AATK
POTEI
OR1D4
ABT1
ASB2
NEU2
CRNN
EIF3F
H4C15
H4C14
USP24
AGAP2
TSPAN31
EFHD2
PTGDR
PAFAH2
RPS7
LTN1
TUT7
OGFOD2
GNAT2
AMPD2
LYPD8
BAIAP2
ORC4
MBD5
RGL4
KMT2A
MIA2
DIXDC1
ZNF787
GTPBP3
ANO8
EVL
FBN2
BPI
RMND1
ARMT1
TNFAIP8L2
BST1
TBC1D3L
TBC1D3I
TBC1D3H
TBC1D3D
TBC1D3G
TBC1D3B
TPM3
VPS13B
SBNO2
LDLRAD4
IQSEC1
KCNIP2
STMN3
RTEL1
FAM227B
DTWD1
SDHAF2
CPSF7
WDFY3
STING1
S100P
NOD2
CALML5
JRK
STAG1
PHF20
TACC1
TBL2
PPIAL4F
PPIAL4E
PPIAL4D
SLC17A9
C10orf99
COPS4
CHCHD5
TMEM53
ARMH1
GPSM3
TNFSF14
PBX2
RNASE7
EIF2D
SEC13
RPS19
RFXANK
BORCS8
HUS1
CLK3
YJU2
TOX2
ARHGEF2
SIGIRR
FCER1G
TTLL8
NCF2
STAT6
IL1RN
MTF2
URM1
GBE1
DNAJA2
VIPR1
ROPN1L
VWA1
IGFBP7
ZNF827
CDK3
CLRN3
TMEM71
CDT1
FRG2
HSH2D
CLDN19
SH3TC2
PROX2
RRP1
BHLHE40
CFLAR
INAVA
OR4D1
ATP2B4
SOGA1
GCNT2
KMT5B
PEX2
GALNT3
PHF19
DEF6
EPHA1
CXCL8
DSTYK
RPL37
TATDN1
NDUFB9
S100B
FSCN3
GIMAP6
RASSF5
CD69
CALML4
GPR162
PEX3
ADAT2
ATP2C1
MAP2K1
NUDT16
RNF149
COMT
YES1
RASA4
CACHD1
RAB7B
RTTN
CENPBD1
PPP1R16B
NOS3
ARRDC1
RAP2C
ARRB1
TPSAB1
PDE6B
GALNT9
RP1L1
CPT2
TMEM121B
PELATON
ZNF197
CALD1
A2M
ADGRD1
MED23
GABPA
ATP5PF
YME1L1
IRF5
SLC16A5
LXN
UBE2QL1
SLC22A13
BCL2L14
RNF130
CYP2E1
CYBC1
PRKD2
RSL24D1
CEBPD
RAB43
RXFP1
SMIM35
SYTL1
SNRPD1
WDR45B
KMT5A
KCNK6
YIF1B
MRC1
NDUFB3
FAM126B
MARCO
AKAP13
NFATC2
RFFL
RBBP5
CFAP298-TCP10L
CFAP298
MAP4K1
EIF3K
AGTRAP
SASH3
POU1F1
CYTH1
NLRP3
CPA3
TBPL1
DUSP3
CFAP97D1
SLC35F6
ERICH1
LGALS12
RFLNA
CENPC
LBR
PLAU
LY6E
CD93
TCTEX1D2
CBX2
TAF13
TMEM123
OR52W1
C11orf42
SYCE2
DENND4B
ZMYND8
EMC3
HRH1
MED10
OTOF
MTRNR2L2
MSH3
DHFR
H4C12
UMODL1
CUL7
FOXN2
ARHGAP39
C9orf16
SEMA4A
SNX32
SLC51A
RPS20
POLDIP3
WASF2
TCF12
TFRC
ARHGEF7
KMT2E
PRKAG1
ZNF385A
ARL5C
DIAPH1
PAG1
PRR29
RAB44
TCTA
RHOA
RUFY3
ACTR3
MED18
SPA17
SIAE
VTA1
NMBR
C1RL
XPC
LSM3
PDE4D
DDX23
H3-3B
IFRD2