ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1177906 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◣ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

PAXBP1
FRG2
PMF1-BGLAP
PMF1
NPNT
TINAGL1
SLC39A14
COL23A1
ZMYM3
FRG2C
KCNIP4
CMSS1
FILIP1L
LRP2
TTYH1
COQ8A
PLA2G7
BAIAP2L2
TNRC6A
NBPF1
EPN1
SYT2
ITPRIP
ARHGEF35
POLN
HAUS3
SPDYE14
SPDYE10P
SNX16
MAMDC2
CRYBB2
TSR2
LOC105370980
ARHGEF5
MTRNR2L2
MSH3
DHFR
ELMOD1
MTRNR2L8
LYRM1
DCUN1D3
NGB
CLTC
KRTAP9-6
ELAVL2
LOC107986453
CYP2A13
SLITRK3
SLC35F3
ZNF462
TES
OR5AP2
ITPRID2
PDE1C
EREG
LDB2
ERRFI1
KRTAP2-4
CLDN20
UBAP2L
C1orf43
MAGEA2B
MAGEA2
RAPH1
CSAG3
PDE6D
COPS7B
SCGB1C1
MTRNR2L1
SRSF5
E2F3
H3C13
H2BC18
TBC1D5
ANXA2
RABL6
SULT6B1
CEBPZOS
WASHC1
C11orf97
ACTB
DMBX1
FANK1
UBE2Z
SIMC1
H3C15
H3C14
H2AC19
H2AC18
APPBP2
ECHDC1
TMEFF2
SPATA16
SUV39H2
OR1F12
SHTN1
CTAGE8
CTAGE4
C13orf42
PDLIM5
RPL8
ZNF34
PCBP3
IQCF2
UBC
HMGA2
ARFGEF1
IDNK
COL6A1
CD163L1
AREG
RICTOR
RAB11FIP2
TCERG1
SLC25A32
DCAF13
ANTXR1
H2BC21
H2AC21
H2AC20
HNRNPA3
PPP2R5A
DSCC1
H3C12
H2BC17
H2AC17
STRIP1
YBX3
SLC35B1
SPATC1L
TOB1
KRT19
STK3
BCL9
CPLX2
SLC38A9
EGR1
UBR5
FBXO11
FLOT1
IER3
EIF3F
MFSD14B
BCKDHB
CSNK1G3
FOSL1
PCMTD1
LUZP2
MND1
VCP
NFE2L1
SLC25A3
NCOA5
CHEK1
HNRNPA2B1
CBX3
ARHGAP39
RAB4A
USP25
CTNNA1
TCF7L2
LRRTM2
MAML1
ADAM15
SMNDC1
NFE2L3
GOPC
GALNT10
NOTCH2NLC
SLC12A8
RMDN1
CPNE3
NOTCH2NLA
ZCCHC4
LMBR1
COMT
TXNRD2
DTD1
PCID2
CUL4A
NSFL1C
TCTE3
ERMARD
GRHL2
UBE2V1
DR1
SEPSECS
NCK1
UBE2O
AANAT
CADM2
RXFP3
ENTPD7
ID1
UBE2D1
TMSB10
MRPS26
GNRH2
ZFP36L1
RPL18A
ZBTB38
SLC16A5
PTEN
KLLN
BZW1
UROD
HECTD3
BRAF
VWA2
CIB2
EEF1A1
POLR2M
XPC
LSM3
SLF1
KIAA0825
TMEM71
PHF20L1
EPM2A
KRTAP2-2
KRTAP2-3
FAHD2B
DIRAS2
GABRA4
SLC5A8
OR5V1
SCGB1C2
SRSF2
MFSD11
CBWD5
CBWD3
TRIB1
DUSP5
FH
FRMD3
CXCL2
SEC61A1
CBWD6
PDXDC1
LRRC58
MTHFS
MFAP3L
H2AX
WDR43
MALSU1
CEP55
TRIM26
ZNF280D
FAM8A1
CCSER1
CSNK2A2
HMGB1
HDLBP
SLTM
RMI2
ZKSCAN1
PPP1CB
FDX1
CIBAR1
TMEM43
CHCHD4
SLC30A5
FAM149A
PCDHGA1
CLDND1
LRRC37A3
SRPRB
FAM160B1
MPI
TUBD1
RPS6KB1
FMNL2
RESF1
FAM120B
C7orf26
PHTF1
VANGL1
RECK
METTL7B
TULP4
PCDHB5
MRPS23
PARG
SCO1
ADPRM
NDUFAF6
FGGY
ZHX1-C8orf76
ZHX1
OXR1
SMC6
GEN1
HERC6
CCDC88A
SLC35A5
SGK3
HNF4G
RPS20
PSMC5
FTSJ3
AFTPH
H2BC11
H2AC11
GRPEL1
SMARCD2
CRPPA
ANKRD18A
EBPL
KRTAP10-12
PSKH2
NFKBIZ
PPARD
GCFC2
DENND4A
ZFP3
EXOC6
ENTPD6
CBR3
FAM221A
TMEM269
OGA
ATF1
SLC7A5
NOMO2
NOMO3
RCN2
FECH
CETN1
TTBK2
TRRAP
LOC100287896
LIPT2
OSER1
DYNLL2
PPWD1
CENPK
ZNF800
CLN5
HEXD
FBXO34
WDR1
CCDC200
MTAP
NFIB
RAD21
MAEL
ILDR2
KRTAP4-5
ITPRID1
RNF151
NDUFB10
RPS2
ZFP91
LPXN
BFSP1
LEPROTL1
MAP11
SH3BP5
PIN4
ELOVL6
FA2H
PRAMEF10
KLHL7
SEC63
CPSF6
GPD2
KITLG
H3-2
PTPRA
NCKAP1
TTC5
AK4
PCDHB11
UMOD
UBE2J2
USP36
EXOC2
WDR45B
VPS36
CKAP2
SLC20A1
LIG3
PCLO
KRTAP2-1
SCYL2
DEPDC4
SNX9
ARRDC4
JMJD1C
EXT1
CHMP7
H2BC4
H2AC6
NFRKB
POMGNT2
EMB
LRP11
MLLT3
CTAGE15
ABRAXAS2
PTMA
SRRM2
EIF3A
PET117
KAT14
HOMER1
SFT2D3
EXOSC7
ZDHHC3
PRKAR1A
INO80D
SYBU
TBC1D2B
ZNF697
SPG7
PANX1
PAM
HSF1
BOP1
LOC100996750
KRTAP4-7
NUTM2D
SEC13
NXF1
FAM207A
RNASEH1
NOCT
DDX59
IMPACT
XYLB
RANBP9
TMX4
C3orf70
SLC7A1
TMEM268
MYZAP
GCOM1
DYNC1LI1
ATMIN
SULT1B1
KCNS1
UHMK1
CYREN
TMED7-TICAM2
TMED7
CLK4
NDFIP1
FBXL4
LPGAT1
MLYCD
MAP3K21
GRK3
EGFR
PCDHB8
PCDHB7
PPP1R2B
TFRC
ZNF124
ZSCAN25
RAD23B
CKAP5
RWDD3
DEPDC7
MYO5A
CACNA1E
ZNF337
CKS2
LRRC59
SLC38A2
DUS1L
YBX1
CPOX
PTK2
APEH
PTS
MIB1
TKT
GPRC5C
ENGASE
TMEM100
H3-3B
REXO1
EIF4A3
PSTK
LOC100289561
KDF1
PIBF1
DIS3
INPP5F
EIF5A
CUL1
TPD52
GNAL
CST3
IDH2
PCDHB14
TMEM202
KLHL41
SARDH
WDR4
WASF1
CDC40
MIDEAS
PTDSS1
MTERF3
PER2
PKP4
CCDC148
TLL2
ITGA6
MAFF
FAM220A
ANKRD18B
NIPAL2
MAP3K14
USP10
DPY19L2
PCDHB2
PCDHB3
PRAMEF33
CSMD3
STX18
SOD2
WTAP
ACOX3
TRMT44
MKRN2OS
MKRN2
CNP
RAB18
CITED2
HDDC2
POLR2D
CPT2
SIRT5
SPTBN1
GCLM
ARHGAP31
TRIP12
FBXO36
SERP1
EIF2A
YPEL2
TIFA
DSE
MFSD14C
PROSER1
NHLRC3
TRIM25
ARSG
ERN1
TRIM39-RPP21
TRIM39
CEBPG
EPB41
C5orf63
C10orf95
NTAQ1
TSPYL4
SLURP1
GTDC1
C1QTNF12
ADAMTS6
GBP2
SORBS2
PCDHB13
PCDHB12
LAMA2
SLCO6A1
TCL1A
ZNF679
GHITM
SLC25A4
MLEC
BORCS5
KDM3A
STK40
RABEP1
TMEM229B
CDK17
OCIAD2
BCAP29
KRTAP10-6
PLEKHH1
DSG2
STEAP3
KRTAP4-12
SLC12A5
LRP5
TM4SF1
NOTCH2NLB
TMEM70
ELOC
ATP6V0B
KANSL1
RPS6
B4GALT2
RPL11
CHD1L
FKBP1A
RMDN2
C9orf85
ABHD17B
DBP
STRIP2
APOLD1
SPTLC2
VEZF1
MIF
ZNRF2
ATP2A2
PRKAA1
TAPT1
SPX
REST
HTATIP2
PCDHA6
PCDHA5
AMD1
API5
AMMECR1L
PLEKHA8
XPO6
MBTPS1
KAZALD1
BLCAP
PARD6B
TAB2
GRK5
PDCD5
ARHGAP29
ZBTB7C
SEPTIN4
HEXIM2
MUS81
CFL1
ERI1
MAP3K7CL
CCT8
CUL7
SUPT20H
VOPP1
GEMIN4
TOMM34
PRDM2
SPEF2
CLDN4
KRTAP10-5
UNC79
BTBD7
ANO2
PARK7
PDCD4
MCL1
STX10
IER2
SCAF4
HSBP1
NUDT18
TXN
POLR2K
FBXO43
MAP3K5
ALOX5
SRCIN1
PTPRD
SPHKAP
NKIRAS1
ITGA7
BLOC1S1
WASHC4
ATXN7L2
TRMT1L
SWT1
ADAR
C1orf53
SMC3
MAGI3
HESX1
APPL1
SREBF1
FUCA2
NR1D2
ODC1
CFLAR
ZNF441
C5orf34
TRIM47
ROCK1
PATJ
LGALSL
FOXD4L3
EIF2D
ZFAND5
COG1
MCMBP
TBCD
KLHL9
MALL
SLC16A6
NT5C2
LRRCC1
ZFHX3
PFN1
ENO3
NDEL1
RTKN2
CMTM7
HOXB9
MICALL2
LRFN1
PTPRN
PEX3
ADAT2
DNM1L
CDK8
RAB1A
SLMAP
KBTBD8
DNAJC25-GNG10
DNAJC25
AMOTL2
GAPDH
AP3M2
SAAL1
ANKRD36C
EHD4
NPM1
CCDC57
ELMO2
CEP68
SLC39A8
TMEM251
MOAP1
TYMSOS
TYMS
TMEM65
PKD1
SERPINB9
CD38
NPY4R
XKR6
MUC12
CDYL2
UBE2D3
SPHK2
RPL18
FAM83E
HNRNPL
P4HB
AGK
SLC25A36
CLK1
SDCBP
PITX3
GBF1
TXNDC12
BTF3L4
FBXL5
TPGS2
NUDT4
ITSN2
NUDT4B
RASAL2
MKI67
PM20D2
BRD3OS
CASD1
ADNP2
SH3D19
MAP2
DOCK5
MRAS
MOXD1
ZNF80
PPRC1
NOTCH2
RPL6
ARNTL
PTPN11
RPL35
ARPC5L
PTPN4
PTP4A1
DDX42
CCDC47
INTS6
GGCT
UQCRFS1
KCTD18
SMIM19
SLC20A2
NDUFA6
TRIP13
BRD9
XPR1
H3C10
H2BC13
H2AC13
SPIDR
ACTR5
TMED3
ARSB
IMPA2
HLA-B
PDE8B
RPL13
NBN
RUBCN
ANKRD46
ELAC1
AEN
ADI1
TGFBR2
TPD52L1
SFXN1
FBXL13
ARMC10
EFR3A
GALNT7
NCOA6
PARD3B
CLSTN1
FSTL1
HSPG2
KRTAP9-2
AKIRIN2
RAD54L2
RCAN1
UBE2L3
SCOC
GSTO1
CD55
ANKRD36B
PANK1
IQSEC3
HELZ
STRN3
AP4S1
RAN
PTPN12
CAV2
SCN8A
RDH16
TBC1D3L
TBC1D3I
TBC1D3H
TBC1D3D
TBC1D3C
BOD1
WAPL
NFYC
SNX19
TOMM40
TXNDC15
PGAP2
SRRT
IPO8
EHBP1
CCZ1B
PELI1
KPNA2
KLF6
BTF3
OAT
ANXA4
SRFBP1
PCTP
DENND4B
AAK1
NCOA2
GNPNAT1
RPE
SLC38A10
DBNDD1
PARP8
GEM
PSEN2
BAG3
GMNC
TLK2
PLAAT1
ACADS
HOXB3
JAK1
PTPRE
INPP4A
GAS8
NANOS1
HOXB4
ARHGAP32
RBM20
PSD3
HEG1
CTAGE6
SLC25A52
BANP
RPS19
PRPF19
ATAD3B
RFX3
RFC4
RMND1
ARMT1
PIGO
TTC9C
HNRNPUL2
SZT2
MED8
FBXW4
LOC100421372
HSPA14
CDNF
CMTR2
RAE1
GRB2
DDX17
EIF4EBP2
SYNCRIP
DHX15
CD44
SMARCC1
SH3BGR
LCA5L
DEK
MFSD8
ABHD18
ASAP1
FAT1
ADRB1
TAS1R2
AARS2
FBXO31
MAP1LC3B
PRRC2B
AZIN1
ZNF354B
SETD3
CCNK
OARD1
NFYA
PHF3
DCUN1D4
SETD4
GLRX2
ATG16L2
STIM2
C2
POMK
RALY
DHRS13
TEX38
ATPAF1
DHRS4L2
MET
TDRD7
ANXA11
SMAD3
TMEM74
AXL
SORL1
SEMA4G
PRSS12
SLK
ICA1
COLEC11
KRT1
PCDHB15
C1GALT1C1L
GORASP2
PAFAH1B2
PIK3CA
OTUD5
MYCBP2
SMAP2
RNF32
PAG1
NEDD4
SEC24D
REEP3
GTF3A
LINC02210-CRHR1
SPATA20
TANC2
CBX2
ZNF532
PCDHB6
CASR
ADNP
DUX4
EIF1
LEMD2
PPP1CC
KMT2E
HNRNPD
C6orf62
DDT
RHOB
TMEM109
MFSD14A