ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728779 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◣ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DCAF12
RLF
ZNF684
IPPK
ZMPSTE24
MTMR9
CAP1
EXO5
CD33
CCAR2
C8orf58
SCNM1
LYSMD1
GRPEL2
ITGB2
ZFP69B
SH3BP2
RPS19
LAMP1
ALOX5AP
GLRX
NLRP12
SPATC1
NFYC
CAB39
NCF1
CD1C
TEAD3
IL1B
RAB24
PRELID1
NDUFS2
ADAMTS4
PGK1
LGALS8
RXRA
FCER1G
TLE3
GPBAR1
PGA4
PGA3
CSF1R
PNP
CEBPD
WDFY3
MTF2
ZNF408
ARHGAP1
ZFP69
NCF2
SETDB1
YES1
FRG2
PPT1
HBS1L
FLI1
ADGB
MTPN
LUZP6
CD244
FAF1
TP53I11
RNF149
URM1
VPS33B
PGA5
STEAP4
ATP5MPL
SNRNP200
SMAP2
PPP1R12C
TLE4
XRCC5
ARHGAP30
ZNF227
MFSD2A
CMIP
IL7R
TIGD4
ARFIP1
SUN1
STK36
RNF25
ARHGEF12
RUNX1
MEFV
MMACHC
CCDC163
POMP
VCPIP1
C8orf44-SGK3
RUBCNL
MDM4
FOXJ3
MRPS18C
HELQ
EXOSC3
TRIT1
APPL2
CEACAM21
FCAMR
NUF2
ITGAM
TMEM30A
DUSP7
TRPV4
IPCEF1
UXS1
FEM1A
VTA1
NMBR
SREK1IP1
CWC27
CLIC5
MMP9
PISD
SASS6
CITED4
TTC14
PPIH
ABT1
RASA1
PRR5
RAB3IL1
MRPL24
SP110
C4orf3
CARD8
MSH6
MIA3
GOLGA7
LCP2
MED23
MXD3
TEKT2
ADPRS
HAUS6
NIBAN3
KIFAP3
SELENOH
MED18
MED10
IL16
SPDYE13
OAS3
OAS2
MTRNR2L8
TEP1
SEMA4C
ZNF780A
RNPEP
CD1A
PDCD2
ROPN1L
FCGR2B
NIP7
COG8
PPIAL4G
UBXN8
MTRNR2L2
MSH3
DHFR
UGGT1
OTUD7B
DOCK8
ARPC2
TNFAIP8L2
FAM207A
C22orf34
PIKFYVE
UBL7
KLF2
TSSC4
USF1
RHEX
TCF12
UTP3
SLC12A6
NOP10
NUTM1
KBTBD7
UBR7
GON7
ARID2
B3GALNT2
EPRS1
ZNF56
COL9A2
GTPBP10
BRIX1
UCHL5
RO60
CD53
UCKL1
SCAF11
NCSTN
COPA
INPP4B
INAVA
TLR4
RPL37A
SIGLEC11
SDCCAG8
CEP170
ELOF1
SERPINB13
CHMP4B
MAP2K1
PIGM
IFNGR1
HIBCH
TMEM154
TFB2M
CNST
MPZ
CCDC149
C6orf89
EXT1
RMND1
ARMT1
DBI
C2orf76
CCL3
CCL3L3
CCL3L1
IFRD2
STK4
RASSF5
NECAP2
IL1RN
PGBD4
EMC7
TCTE3
ERMARD
UBAP1
CXCL1
TUBA8
EIF2D
KBTBD6
METTL18
C1orf112
SCAMP2
ZNF622
KCNK6
FAM227B
DTWD1
DAP
RPL37
HIGD2B
BBS4
PPIAL4H
DEFA4
PA2G4
ARPC3
TNFAIP1
IFT20
DCAF10
TBPL1
FASLG
ZNF484
RMDN1
DENND4B
C1orf198
SUSD6
MEF2C
ATP2B4
AP1B1
CTSG
WDR70
TMEM53
ARMH1
ADGRE1
INTS9
HMBOX1
RAPGEF1
ARHGEF1
GPR68
TIPRL
ZNF410
CCND3
TCTEX1D1
ALDOA
TRIAP1
RGL1
ARPC5
NR3C1
DISC1
ZP3
SNAPC3
LRFN3
CHCHD5
PDLIM2
SIGLEC16
THYN1
ACAD8
MTMR14
TPRKB
XRN2
NDFIP2
GPAA1
EXOSC4
FBXO38
LILRA2
NUDCD1
TATDN3
NSL1
APOL6
COL8A2
NOTCH2NLC
IPP
TMEM59
CMTR1
S100A8
HK3
NOL11
MARCO
TAF11
ANKS1A
SDHAF3
CFAP298-TCP10L
CFAP298
MAPKAPK2
SKP2
LMBRD2
ADAM10
HMGB1
USPL1
GALK2
COPS2
ZNF226
CPNE5
TOMM20
MAP1S
AOPEP
HARS2
HARS1
LILRB4
TMEM208
LRRC29
EIF3D
ITGA4
ZNF658
SLC22A16
STAU1
MRPS23
PDF
PRPF3
TLE1
JAML
KCTD5
FCRL4
MS4A3
NOTCH2
FKBP1A
FUCA1
VIRMA
SNRPC
NME7
BLZF1
RGS12
EIF2B3
NSUN5
USP3
PHIP
TPT1
MIDEAS
PLEC
PTK2B
TRIM35
IL6R
SRSF11
LRRC40
ATG16L1
TPM3
TOR1AIP2
TOR1AIP1
NCOA3
ERLIN2
RNGTT
AK2
ALG10
SDHAF2
CPSF7
EXOC3L1
E2F4
TMIGD3
ADORA3
PKN2
TMEM104
NAT9
PPP4R3A
CBWD1
ISY1-RAB43
ISY1
DNAJC10
KIF2C
FIGNL2
IRAK1BP1
XRRA1
SPCS2
MRPL3
IKBKE
TBRG4
PRRG2
NOSIP
MRPL10
LRRC46
CUL7
TATDN1
NDUFB9
THOC5
DPY19L3
CYB5R1
FCAR
SCAF1
RRAS
WDR61
MAMDC2
CCL22
JOSD2
ASPDH
TMEM33
SNX3
ZNF197
PPIAL4F
PPIAL4E
PPIAL4D
ZC3H3
KLHL20
LMO2
PRAM1
SNAPC5
ATG5
SMARCA4
ZNF614
FAM200B
GGPS1
ARID4B
MAGEF1
PHACTR4
PDPR
TACC1
LTB
LST1
SAMHD1
TRIP4
GPANK1
CSNK2B
RTF2
SRP9
LY6G5B
SEC22B
BOLA1
GHRL
SNX19
TPK1
ZNF221
LYPLA2
HEATR1
SLC8A1
PHB
TBL3
INTS12
GSTCD
MOB4
BOD1L1
FBF1
MAP3K7CL
NAT10
MYBL1
CCT8
CMPK2
NDUFS3
KBTBD4
TTC13
DR1
PEX12
NDUFA12
ZNF668
ZNF646
RTCA
SCML1
OSCAR
NDUFA3
GADD45B
VPS25
PTTG1IP
SUCNR1
MAML2
TOR1A
SEC31A
ZFYVE1
DDX18
LAMTOR5
DUX4
MTERF1
MFSD10
RPS20
MTRNR2L1
RAB1A
ERI1
ASXL2
CHMP5
BAG1
P3H1
LRRFIP1
PEX3
ADAT2
TMEM43
CHCHD4
HSPA13
TBC1D8B
CAVIN2
TMEM222
NUS1
GTF2H3
EIF2B1
GTF2H2C
ZNF26
GTF2H2
ZNF224
DHDDS
CHMP7
SLC35F6
GNA15
FCGRT
MYL5
ATP5ME
NUP133
SLC35B4
PHC2
CCDC86
A2M
SNUPN
PPIE
WASHC5
NSMCE2
PPIL4
AKR1A1
NR1D1
BID
ZNF398
ZNF425
TRIP11
NCF4
CERS2
ANXA9
MRPS35
CCNT2
DNAJC5B
CSF2RB
ATG7
MTIF2
ALG10B
WDR55
TMX3
CCDC102B
TCHP
MICOS13
HSD11B1L
DUSP6
TAGAP
CIITA
TNFSF10
RAB44
TMTC3
CEP290
RPAP3
MFSD4B
LMBR1
ZNF142
BCS1L
CBFA2T3
BIN2
PPP1R8
TAF1B
UBAP2L
C1orf43
RGS18
MMUT
CENPQ
ZNF350
ARHGAP18
ORMDL3
STK25
RWDD1
SRPRA
TRAPPC8
PRKCSH
CCDC151
WNT2B
AOAH
ABCF2
ABRAXAS2
GTF2H2C_2
PSMD7
PIGF
CRIPT
H3-3B
UNK
TMEM127
CIAO1
WBP1
INO80B
VPS26C
DECR1
FPR1
SYMPK
FOXA3
PSMD3
SCAND1
GNPAT
C1orf131
TRIM25
RCSD1
CEACAM4
IBA57
RNF139
RPL38
PTPN4
SPG11
PPP6C
UBE4A
TNPO1
SEMA4B
AHI1
MINDY3
TERF2
RBM45
PDE11A
PPME1
C2CD3
SF3B1
ZC3H13
RPIA
WIPF2
LARS2
SRFBP1
PDSS2
KIZ
RAD50
BAZ1A
RAB27B
RPL5
CLPP
MRPS14
HMOX1
MLKL
S100A9
GIMAP6
MAD2L1BP
GTPBP2
NTAN1
EPN1
CAPG
FAM120B
TIMM10
TIMM21
FBXO15
ZNF697
TMEM121B
CCDC30
ZMYND12
PPCS
UBLCP1
WDR7
COX7A2
SYK
CD5L
NOTCH2NLA
CHMP1B
TBC1D23
MAGOH
CBWD5
LATS1
SNX17
EIF2B4
DUS3L
GET4
RPL27
ATP6V1C1
ARL4A
KPNA5
ZNF3
FRG1
OTUD6B
MS4A7
C1orf74
PARP10
GRINA
TMEM115
RPS6KB2
ZNF225
CBWD3
CBWD6
THEM4
PUM1
IL10RB
PHLPP1
CYB5B
TIFAB
SLC24A1
INTS14
SF3B5
NUP42
ARID3B
TLN1
CREB3
ADAR
COX16
NGB
FRG2C
N4BP2L2
COX5B
ACRBP
BATF
DCP1A
SNAP47
JMJD4
TPR
ODR4
ETNK1
SLC30A5
HCN3
CLK2
ANXA2R
PICALM
ATP13A2
CCDC182
CBWD2
RANBP3
WDR27
C6orf120
ZNF318
VSIR
MDN1
SECISBP2L
NKIRAS1
RPL15
SLC33A1
TBL2
GYPC
NCKAP1L
ZNF337
SESN1
CEP57L1
NUP58
TMEM39B
CLASP1
PIGBOS1
PIGB
CTNNB1
PRCC
TRAK2
STRADB
CDCA8
C1orf109
ICAM1
NCALD
CALHM6
OR4D9
AHCTF1
DCLRE1B
AP4B1
COX6A1
RASA3
ACSL1
ATP6V1G2
NFKBIL1
ETFDH
C4orf46
YTHDF2
SUCLA2
SMARCD3
WDR43
TOMM40
MCPH1
ZC3HAV1
RIC8B
DESI2
AP3S2
RRS1
ADHFE1
ERCC6L2
TAF12
LYRM1
DCUN1D3
TSN
DMAC1
RRM1
NOXA1
TCTEX1D2
PEX19
HAX1
RAPGEF2
RAC2
SDSL
HLA-DMB
TMEM70
ELOC
GPR137
SRSF4
AGGF1
GRAP2
DEFB1
GIMAP8
TADA1
DNAJC16
CASP9
DBN1
FRA10AC1
ZNF444
SLC25A32
DCAF13
RAB10
RPAP1
TIRAP
PAFAH2
ZW10
BOD1
TRMU
ZNF547
TRAPPC2B
THAP12
GVQW3
LOC100289561
GNAI2
CCT5
ATPSCKMT
UBR1
ADGRG5
RPL29
THAP11
NUTF2
CENPT
WASF1
CDC40
ZNF268
MTHFD2L
MYCBP2
CLEC11A
SHANK1
BCL2A1
NMNAT1
LZIC
ZNF212
SART1
ADSS2
THAP1
ABCB10
ABHD3
CD274
SKIV2L
NELFE
LUC7L2
KIAA0513
MPEG1
MRPL55
NUDT16
SRBD1
NDUFAB1
MED4
MRPS31
ERO1B
PLPBP
CYP4V2
DAPP1
LILRB1
ZNF140
VKORC1
EML6
LSM2
RARA
TNFRSF1B
UBR2
PHF13
ZNF148
RPS12
GUK1
WDFY2
RNF14
SGO2
RALB
ASNSD1
ASDURF
CCL4L2
OR52K1
BRF2
PPP1R15B
NFE2L2
CD48
TTLL4
TMCO1
MIER1
DNAI4
CPT2
RAB43
ADA2
PPCDC
PINX1
SLC7A6OS
PRMT7
ZNF251
RAG2
IFTAP
CRYZL2P-SEC16B
SOD2
WTAP
HMGCL
METTL9
CDK5RAP2
C1orf54
APH1A
PACC1
SMIM20
KIFC1
CCDC15
PATL1
SIGLECL1
OR4Q2
UBE2D3
RALBP1
RNF141
GTF2E2
TBCE
DMRT2
LRIF1
CPNE8
TRPM2
IL19
SIGLEC9
IL10
SPHK2
RPL18
FAM83E
SLC30A6
AP2B1
TEX46
KDM1A
THAP6
DEF6
CCNL1
HCK
CFAP20
ZNF235
CDC37L1
RFC2
VIPR1
SERPINI1
PDCD10
YARS1
S100PBP
PES1
SLC16A3
C3orf86
TCN2
ANKRD33
PTGES
MEN1
IPO8
MRPL45
MTMR6
RUFY3
PPIAL4C
TRMT11
DRC7
CCL26
P2RY6
GNB2
CCZ1B
TRAPPC4
RPS25
TBRG1
GMCL1
STXBP3
NBR1
IRF2BP2
EFHC1
SP140L
NOTCH2NLB
ZNF749
INTS1
EEF1AKNMT
DHX8
KIAA1586
GOLGA5
SLC30A7
EXTL2
SELPLG
LAMB3
MARCHF9
CDK4
CLN5
GPN2
PLSCR1
PRKN
PACRG
PEX2
TGDS
SERPINA1