ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX22001292 | DLD-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◣ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

H4C11
GSTA4
H4C12
H4C15
H4C14
UBC
FLOT1
IER3
KLF6
H3C2
H2AC4
H4C2
HEXIM2
AREG
H3C15
H3C14
H2AC19
H2AC18
H2BC5
H1-4
CALM2
EIF2D
DUX4
DCP1A
H2BC11
H2AC11
FRG2C
GDF15
H4C5
PRDX1
ERRFI1
MTRNR2L1
KMT2A
EEF1A1
H3C13
H2BC18
CDC25C
FAM53C
ZBTB4
SLC35G6
POLR2A
KRT19
EREG
H4C3
H1-6
H2BC21
H2AC21
H2AC20
ZFAND5
OPRL1
LKAAEAR1
LOC102724265
GTF2IRD2B
BBC3
MTHFD2
GAPDH
ARPP19
CITED2
PKM
VRK2
HEXB
ID2
TRIB3
H2BC4
H2AC6
ARHGAP32
DRG2
PMAIP1
RNF43
PPP4R3B
EGLN1
C17orf75
GTPBP6
NUCKS1
DDAH1
CCN1
H1-2
INO80D
TMEM242
EPC1
STX16
CALM1
ZC3H11A
ZBED6
BCL9L
H3C12
H2BC17
H2AC17
TMEM68
TGS1
VWA8
ZER1
ACYP2
DCAF10
H2AX
GTF2H2C_2
GTF2H2C
ZCCHC3
SYDE2
TOB2
GTF2IRD2
H4C1
H3C1
H1-1
ZNF341
NRL
PCK2
POLR3D
EPCAM
RCOR3
ACSF3
PERP
RHOB
SRSF2
MFSD11
MKNK2
MED23
PTBP1
GTF2H2
COL23A1
AAR2
TMSB10
CIRBP
NFKBIA
PRSS22
RPL18A
NOTCH2NLA
ZNF296
GEMIN7
FRG2
H3C7
H2BC9
H4C7
TPD52
LAMA3
LTC4S
PRSS23
PLEKHM3
H4-16
H2AJ
IST1
SRSF6
AMOTL2
KRT8
ZNF518A
NABP1
TUBGCP3
JUNB
STX18
TRA2B
SMAD3
ELOB
BUD13
SDC4
PATZ1
TBC1D22A
TP53BP2
MIER1
HNRNPA3
DHRS13
TNFRSF6B
FAM227B
DTWD1
P4HA1
TPI1
MEAK7
TMA16
FAM136A
TNRC18
GBA
LATS1
MYL12A
C5orf24
UBE3C
ANXA4
TACSTD2
TBC1D14
ARHGEF35
PPFIBP2
TRAM2
ADPRHL1
DDIT4
GTF2A2
CASC3
AIF1
PRRC2A
SNX5
MGME1
ETS1
PRAG1
RORA
FRA10AC1
RPL10A
SRSF3
DMTF1
SRCAP
LOC730183
ZNF143
KRT18
MRPL44
GADD45B
H2BC7
H3C4
H2AC7
SKIDA1
NOXA1
KNTC1
ALDH3A1
NFIB
HIC2
INO80
ZNF292
ZNF410
HMGN2
GRHL3
CTNNB1
SLC24A1
INTS14
PSMD8
RTN4
BCAS4
TRIB1
ITGB1
ARL15
SIPA1L1
TNFSF15
HRH1
MANF
SLC44A2
MPHOSPH10
MCEE
KEAP1
CHAC1
MTF2
USP30
MTMR2
ZMPSTE24
SAR1B
COX18
KIF21A
ZNF609
TBX3
PNRC1
RNF220
FAM162A
CCDC58
ZC3H12C
TGFB2
XPO4
PHKB
ITFG1
DDX6
RUNDC3B
CRIM1
CCDC153
GTF3C2
RBM25
TM2D1
H3C11
PIAS3
CFL2
KDM7A
H4C13
KANK2
NDUFS7
ODF3L2
RMDN2
RAD54L2
NFYC
TMEM106B
MTCH2
H2BC12
H2AC12
PFKFB3
ADAP1
DNPH1
CHD2
TUBA1B
EIF4A3
GET4
DNAJC19
TBC1D19
UGP2
PDCD2
ZC3H4
DYNLL2
MRPL21
IGHMBP2
PPIA
EIF1
ZBTB7B
AFF1
C1orf53
EIF4G1
LSM14A
CBX4
ATP8B1
LDHA
RFT1
VPS35L
METTL15
KIF18A
RHBDD1
SPTAN1
RNF146
ZCCHC4
RPL5
TRDMT1
CREBL2
WSB1
ZDHHC17
ZNF706
POLR3H
NIPSNAP2
DUS1L
ZBTB37
PDF
USP3
ATF4
UBE2J1
ZNF84
DARS1
USP24
TBL1XR1
NFKB1
NOXO1
GFER
ZFAND6
ANKRD18A
FECH
GTF3C5
MCL1
UBE2S
STAG1
SUCLG2
TATDN3
NSL1
KMT2E
STMP1
ARID1A
H4C4
RGS3
H2BC6
MTA3
TRIM55
TFF1
NME1-NME2
NME1
TERF2
PRDM15
H2BC15
H2AC15
SYK
DOCK7
NIBAN2
HUS1
FRG1
PKP4
CCDC148
VHL
DENND6A
ASB2
MLLT10
VWA1
DLX4
FOXJ3
TOB1
SLC25A51
ERCC1
SMIM19
SLC20A2
MEMO1
HILPDA
TJP1
VPS54
FAM240C
LOC100130520
CD300H
LAMP1
COMMD1
MTIF2
TRIP11
UBE2V2
CDKN1A
SVBP
ERMAP
SHB
GATA6
ZBTB45
HSPA5
INTS12
GSTCD
SEC11A
KAT6A
LEPROTL1
TJP2
EPB41L4B
ELF3
RBM43
MUC20
KMT5B
TMEM222
ATG5
PSMA1
KDF1
EBAG9
TM2D2
ADAM9
SMC5
CEBPA
REL
SLC39A14
IL20RA
NUF2
ACTB
CDC73
ZNF76
ANKRD40
CDH1
SAV1
C15orf61
FUT4
VARS2
YWHAH
ARHGAP45
FAT1
RAPH1
PARP9
DTX3L
BANP
MYLIP
ZNF770
EIF4G2
PCBP1
ARHGEF38
HMGB1
WDR11
ZSWIM7
TTC19
MRPS31
HOMER1
FANCL
PCBD1
PAK6
CAV1
EIF4A2
PSMF1
ACTRT3
ZNF286A
HNRNPF
CREBZF
PAIP1
SH3RF1
CMTM8
SEC13
AURKAIP1
RPS3
REXO4
ADAMTS13
MFF
C6orf62
ZFP62
PTDSS1
MTERF3
PSMC1
KAZALD1
ZBTB38
TGFA
ITPRID2
RALGAPA1
SEC24D
TMEM41A
KATNBL1
UFL1
MAP2K2
RABGAP1
LNPEP
TMEM216
AAK1
GADD45GIP1
EPN2
WDR74
HERPUD1
SLC38A2
MRPL1
MTHFD1L
NFAT5
USP34
EZR
SMCHD1
AHR
UBE2E3
SPRY2
LRP6
NSFL1C
SLC44A1
IPO9
CCDC7
BTG1
DEK
CHMP6
CEBPB
LRRC61
IFITM2
IFITM1
RPS5
SLC35A3
SOCS5
MTHFS
DISP1
PDE2A
WSB2
SLCO1B3
ATP5MF-PTCD1
ATP5MF
USPL1
BRIX1
CCT4
EIF2S2
MRPL3
CIAO3
CSKMT
C11orf98
SELENOT
HEBP2
TMEM45A
ARHGEF5
F3
CLU
KLRC2
SOD2
WTAP
PTEN
KLLN
KIAA0232
FUT11
NR4A3
ARL5A
SNTB2
SOCS1
IGF2R
VWA7
ACOT2
BOD1L1
CGGBP1
SLC25A3
C14orf93
C3orf38
TACC1
C4orf36
SP1
TCF20
PSMC6
TM4SF1
DNAJC11
EIF4A1
EXOSC8
ALG5
ZFP36
SRSF4
H1-3
XBP1
PXT1
KCTD20
TMEM95
KCTD11
NAPEPLD
PLEKHG2
MAN1B1
PAK1
DBF4B
IRS1
SRSF1
RPL37
RPL13
THEM4
RNF6
AKIRIN1
PCNX4
ANKRD36C
PRDM5
CDC25B
CENPB
TRIP4
FUS
EMC4
TUBA1C
UBA2
SNRPG
BRD2
CD55
SENP6
TMCO3
DCUN1D2
PIK3R1
ZYX
FAM131B
FOXH1
PPP1R16A
CASD1
ZNF562
PGM1
TMCO4
NRP1
TNS4
SMIM12
YWHAQ
RBM15B
ERCC6L2
PYGO2
LOC101928120
RRP1B
HSF2BP
ARF6
FTH1
CPPED1
PSKH1
SMG6
MACC1
ZBED8
H1-5
SRR
H2AC16
BAHCC1
ALG13
BCAR1
PHLDA2
DR1
EXD2
LTBR
STPG3
NELFB
CPOX
TEX22
PHLDA1
TMEM17
DLC1
STAT5B
MYO5A
TEX46
KDM1A
BAZ1B
THBS1
DCLRE1B
AP4B1
MTHFD2L
ERN1
RABGGTA
FUT10
ZFHX3
ISG20
SYNJ2
DSG2
TNNI2
TNKS1BP1
TRIM3
SYT8
HTRA2
DQX1
MAD2L1BP
MDM4
PCBP2
RPL6
PTPN11
ELF2
ZNF623
SP3
UPF2
UGDH
SRD5A3
FOXJ2
SRXN1
MOV10
SURF6
TVP23B
POR
NUDCD3
SLC39A13
XRCC5
GALE
AGPS
PGGT1B
ITGAV
LSR
CACNB1
RPL19
RANBP9
H3C10
H2BC13
H2AC13
PRELID2
FAM184A
SASH3
CCNI2
PDE6D
COPS7B
KMT2D
SNAP47
JMJD4
HEXIM1
NDUFAF1
TSPAN10
NPLOC4
ZNF740
CSAD
HNRNPU
ATL2
ZC3HC1
AKAP10
RCC1
GSK3B
OAT
EPG5
FH
SLC25A37
SMARCA4
TNFSF9
LRP2BP
ANKRD37
DLAT
EPM2A
PRKCE
PSME4
CRYBG1
TAF4
NIPA1
PRTFDC1
ZC3H6
CCDC88A
ARFGAP2
AP3S2
SRSF7
SNRPC
STK40
HECTD2
ANP32B
PDS5B
KCNQ1
KDM4B
TUBB4B
ARL6IP1
VPS45
PHF3
RFESD
SQSTM1
ZAR1L
BRCA2
ZSCAN9
PBK
SGK1
CLDN4
SCRN1
MYO1B
CLSTN1
TMPRSS13
SULT1C4
SRP68
GALR2
MOB3A
IZUMO4
RRM1
WIZ
AVPI1
KIF22
CEP135
SLC39A10
INTS6
FGGY
VPS9D1
ZNF621
TESMIN
RHOG
YAP1
SMURF2
EP400
DPY19L1
H2BC14
H2AC14
ICMT
LAMC2
TCF12
DPY19L4
GRHL2
DMAP1
SCFD1
MARCHF7
STX6
SMAGP
RBM45
PDE11A
BLOC1S6
OCIAD1
CHAMP1
COMT
RNF135
MPP5
TXNRD2
TIA1
AIFM2
BCL9
PFKL
TSKU
XRRA1
SPCS2
POLDIP3
PPP1CC
GMFB
LEMD3
DDX59
PLK2
STK11
SERTAD1
NDST2
ZNF185
SCAP
CELF1
POLR3G
MBLAC2
DCK
ZNF236
UEVLD
DPYSL2
CTDSP1
DNAAF2
ABCA5
PTPMT1
FAIM
SH3D19
GSAP
HKDC1
KRT72
LOC112267881
KIR2DL1
TOMM22
ARHGEF12
DGAT1
GPAA1
EXOSC4
RAD52
ADK
LRRC37A3
TET3
NDUFC2-KCTD14
NDUFC2
HSPA9
REPIN1
TMEM168
UBE2F
APOLD1
KIF5B
MFSD10
DMXL2
SGTB
NLN
AGR2
DSTYK
DCAF8
RBL2
RPS14
DGKZ
COPS3
IMPACT
PTPDC1
COMMD10
E2F7
UGCG
SGPL1
GRK7
PAFAH2
PEX3
ADAT2
DIP2A
C8orf58
MRPS15
TACO1
VIRMA
COMMD2
C2orf42
TTI2
IPO4
PPP1R18
ZDHHC7
TM9SF3
LRBA
MTMR10
VIPR1
ANXA11
NRM
C19orf33
EEF2
YARS1
S100PBP
RPS8
ATAD3A
ZNF692
DYRK1A
RICTOR
HLCS
MFAP3L
NADK
LYPLAL1
CHST11
RAN
PARD3B
NOTCH2NLB
NXF1
SCRIB
CCNC
NCOA3
ATR
PELP1
KLHL12
USP21
NFKBIZ
RRP8
ILK
SLTM
ATIC
CDC16
MED18
KCTD18
INTS10
PTBP3
L3HYPDH
JKAMP
ZNHIT6
PALD1
PNMA1
GPR39
INSR
WWP1
UBE2E2
SATB2
KPNB1
C6orf226
TIGD1
EIF4E2
EXOSC6
HNRNPR
ARFGEF2
UBE2Z
STAMBPL1
PPIG
NDRG1
SF1
FAM20B
PDIA3
RABL6
STK38L
SHTN1
HINT1
FAM168B
TEX38
ATPAF1
GPRC5A
ETV4
UPF1
ARHGAP29
SPOPL
KBTBD11
CLTC
EIF3F
BRF2
METTL9
IPO7
MRPL48
EIF2B5
NELFA
CRLS1
MAT2A
GNAI2
SDCBP
PABPN1
DYNC1LI2
ZCCHC17
SNRNP40
MT2A
SKA2
PRR11
ANKEF1
MET
MCTP1
SNX9
ZNF579
ALDH7A1
MRPL39
LRCH4
FBXO24
SIRT4
DYNLL1
EFCAB2
CRK
UBE2L3
RPL11
NKIRAS2
DNAJC7
RHBDD3
EWSR1
INTS5
SRSF9