ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9730734 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◣ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

UBC
H4C15
H4C14
H1-2
H2BC21
H2AC21
H2AC20
H3C2
H2AC4
H4C2
NFYC
PABPC4
CITED4
H1-3
RCC1
H2BC5
H1-4
WDR74
TSPOAP1
AZU1
H2BC11
H2AC11
GPX1
EGR1
H3C13
H2BC18
H2BC12
H2AC12
H3C15
H3C14
H2AC19
H2AC18
CAP1
H3C12
H2BC17
H2AC17
H4C9
H4C11
H4C12
PARP2
H3C11
H1-5
H2AC16
SLC3A2
ST3GAL3
H4C6
ZMPSTE24
H3C8
H2BC10
EEF1A1
CEBPA
H2BC8
H2AC8
H2BC4
H2AC6
TASL
PTMA
ACTB
ZFP36
PLEKHG2
H1-10
H4C3
H1-6
H4C1
H3C1
H1-1
H3C10
H2BC13
H2AC13
H3C7
H2BC9
H4C7
FTL
EXO5
H3C3
H2BC3
PNP
TMEM107
SIRT4
EIF4A2
H4C4
H2BC6
ZNFX1
TIMP3
AIF1
PRRC2A
ZFP69
H3-2
TXNIP
ID1
ANKRD13D
NDUFAF3
DALRD3
ZFP69B
MCL1
TRAF7
POLDIP3
H4C5
EIF4A1
GBA
ELANE
H2BC7
H3C4
H2AC7
ZBTB4
SLC35G6
POLR2A
MS4A6A
H2BC14
H2AC14
H4C13
SRGN
ZFP36L2
CITED2
ZBTB37
CA2
TMSB4X
ZEB2
PLAC8
H1-0
GCAT
COL9A2
IRF2BP2
ZNF438
JUNB
RPS27
RAB13
MS4A7
RPL10A
BAHCC1
HNRNPA2B1
CBX3
H4C8
TUBB4B
FARSA
CALR
PPIA
MRPS18B
FAM200B
MFSD2A
LOC730098
CCL27
SRSF2
MFSD11
AMD1
HSPA8
HMGN2
H3-3B
PABPC1
ADAMTS1
TNFSF9
IRF8
PFN1
ENO3
PPT1
ZNF684
FUS
CHI3L1
MBNL1
SRSF3
H2AX
H2BC15
H2AC15
S100A13
CHTOP
MTF2
YBX1
IBA57
TRIT1
JMJD1C
MAT2A
HMGB2
SVBP
ERMAP
MYC
DUX4
SLC38A2
HSP90AB1
RPL10
RPL12
LRSAM1
MUS81
CFL1
RNF151
RPS2
DNAJB4
BBC3
FASN
CFD
ATP6V1G2
NFKBIL1
DDX39B
BMP8B
RPS20
RPLP0
GAPDH
KLF7
HNRNPH1
HYI
NKIRAS1
RPL15
HEXIM2
SLC39A10
LYST
RPL27A
MRPL35
IMMT
C6orf226
H2BS1
TCTEX1D1
DHRS9
HSPB1
TOMM20
CIRBP
RPL11
DESI2
TEX30
BAZ1A
MEF2D
RPL5
RPLP1
RNF220
GLUL
ATF4
TUBB
MDC1
NUDT7
RPS6
FOS
MBD6
DDIT3
MTRNR2L1
ID2
SLC39A4
CPSF1
TRIM25
BRWD1
CTPS1
CSKMT
C11orf98
CDC20
STX10
IER2
SLC25A6
H2AZ1
DNAJB14
SP9
HSPA5
RPL13A
MACROH2A1
RUNX1
HEYL
C6orf62
RBL1
EIF1
ZNF143
CBX5
HNRNPA1
YWHAG
ZBTB45
RPS8
EFCAB2
HMGA1
PCIF1
H2BU1
H2AW
AGPAT2
AURKAIP1
PTBP1
PDLIM2
TPCN1
IQCD
DPY19L4
ISOC2
GTF2A1
RIMS3
PLEKHM3
SDCBP
PTEN
KLLN
LIN9
RLF
TMSB10
ZC3H10
RPL41
RPS16
SLC16A3
FAM43A
CCDC30
ZMYND12
PPCS
ZNF92
FOXD1
PPIF
INTS6
RPS3
COA6
RNPS1
SRSF7
RNF149
ATXN7L2
INO80D
PEX6
RNASEH2B
MEF2C
ABTB1
SCRIB
FAM133B
RSRP1
GTF2IRD2B
P2RY2
RAD54L2
OARD1
NFYA
GRK2
ZNF124
COQ8A
TAF1D
C11orf54
RPL24
SMAP2
LMNB1
MAN2C1
CTBS
NCL
P4HB
TP53BP2
NSUN4
TTI2
TMBIM4
LAIR1
LDHA
HNRNPAB
ACTRT3
NDUFB3
FAM126B
GMNN
NDUFS7
TCF3
ZFAND5
NOTCH1
KAT7
GLO1
PGBD2
RASSF5
ZSCAN31
RPL8
ZNF34
RPL22L1
SEC22B
ZFAND3
VASP
RPL30
KCNQ4
GSTA4
C19orf48
TUBA1B
VGLL4
TMPO
TMA16
ZNF670
EIF2S2
IQCG
KATNBL1
RPL35A
USP4
SUZ12
COQ2
JUND
RGL2
CHD2
TOR1AIP2
TOR1AIP1
C17orf75
RBBP5
YWHAH
SPI1
DOCK8
RRM2
S100A4
S100A5
MYCL
DDX60L
S100A3
DDX1
MTR
EXOSC3
PTPN6
C12orf57
FOXP1
ABCA2
C9orf139
FUT7
EEF2
RFX3
CYTH2
PKNOX1
ANXA4
KCTD18
COMMD3-BMI1
COMMD3
BMI1
CYC1
TUBB6
LAT2
FAF1
RPL3
DDX59
MRPL1
RPL36AL
MGAT2
TBC1D5
FRG2
SLC25A28
CYP7B1
C8orf58
CCAR2
DCAF12
RPS19
RPL13
DMAP1
NARF
RPL17-C18orf32
RPL17
ANKRD40
BAZ1B
CUL7
RXRA
DEF6
CLTC
LUC7L2
MARCHF7
GPR160
TRAM2
ELOVL1
ERLIN2
REXO5
ERI2
TNRC6B
DENND4B
SUPT3H
COX7A2
SLC9A8
SRCAP
LOC730183
SEPHS2
PMAIP1
EIF2D
PPIH
SMARCD2
ZNF93
MRPL21
IGHMBP2
MLLT11
CDC42SE1
ZNF7
UBE2I
NLRP3
TRIM55
ZNF517
ZNF804A
RCOR3
ZER1
SERP1
EIF2A
TNPO1
KRCC1
PTGER4
FOXD4
KMT5B
KDM4A
SNUPN
NUCB2
PEX3
ADAT2
EXOSC6
ZNF787
WDFY1
LDHB
CLIC3
PAXX
DLX4
RPLP2
PIDD1
RPSA
GADD45B
EGLN1
PAIP1
PPP1R27
MCRIP1
FOXJ3
ASH2L
GABPB2
RNPEP
IL17RA
MS4A6E
UBB
TMEM70
ELOC
ARL8B
UCP2
AMACR
PXT1
KCTD20
CAPRIN1
NRROS
NCAM2
RPL22
SRSF1
RPL31
TCOF1
CUL9
ELAC1
HAUS4
LRRC24
ZNF22
LZTS2
C8orf82
CYCS
NLE1
ARF6
NOXA1
PDLIM7
FUT4
NSD1
RWDD1
DDX5
CPEB2
SPN
FES
NPM1
DHRS12
REEP3
B3GNT2
FRY
TCIRG1
ATAD2
DCAF10
GPANK1
CSNK2B
C6orf47
CBWD5
CBWD3
DNAJC9
CBWD6
NRL
DCAF11
TUSC1
MRC2
OR52W1
C11orf42
DSTYK
SMG8
PYROXD1
ATIC
H3-3A
ZNF341
UBE2R2
SINHCAF
ECHDC2
APOC4
APOC2
BRF2
ITFG2
FKBP5
TMEM216
GRIN2D
KDELR1
ZC3H6
OAZ1
RPS15A
DHX9
RTL10
GNB1L
CYBC1
GTF2H2C_2
GTF2H2
B3GALT4
VPS52
RPS18
MPDU1
LOC100996842
CD68
VPS28
COX20
NSMAF
RPS23
ATP6AP1L
TSNAX
DPY19L3
HPS6
NFKBIA
SRF
LAPTM5
LCP1
THSD7A
SRP9
TRA2B
USF1
STIL
FIBP
CCDC85B
PIP4K2B
D2HGDH
ARHGEF2
CSF1R
FSTL3
UBL7
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
C6orf89
TCTE3
ERMARD
SRSF10
TIGD5
EEF1D
RPL7A
MED22
VRK2
PPIL1
RACK1
EPM2A
SLAIN2
PTER
TIMM13
HSD17B8
RING1
APBB1IP
C9orf64
TMEM79
SMG5
ZFPL1
CDCA5
PSMD8
HNRNPU
AZIN1
C1orf53
NLRX1
IRF5
MTRNR2L8
NOCT
ZNF200
SCAF8
RPS7
TSPAN10
NPLOC4
TPM3
CC2D1B
RAB3GAP1
GMEB1
PRTN3
SLC39A1
AARS2
MARCHF6
RPL36
VPS29
RAD9B
CRADD
BTBD1
CREB3L4
CLSPN
FAAP20
S100A6
TOB2
GTF3C3
S100A11
APOA1
NBN
ZNF76
ZNF296
GEMIN7
EMC4
TCTA
RHOA
ANP32B
ZNF217
NUDT4
VAX2
STMN3
RTEL1
SRSF6
DMTF1
C8G
PPIE
FBXW5
ZNF107
HES6
ADGRL1
P2RY6
LEMD2
USE1
GNAI2
CLK1
TPM4
UAP1
MSN
UCHL5
RO60
ZNF691
SLC35E2B
OIP5
NUSAP1
HYLS1
SMC4
IFT80
UNKL
COTL1
IRX3
AHCTF1
DRG2
NUCKS1
POGLUT2
BIVM
TRAPPC4
RPS25
ZWILCH
RPL4
METTL21A
SLURP1
RABGGTB
CAMK2D
ENDOV
MYH9
SLC35D1
DCP1A
R3HCC1
PSEN1
GSDMD
STAT1
BZW1
ANP32A
PARP1
DNAJC5B
SNAPC3
PCNA
ACYP2
SELENOT
PCBP1
PSMA1
IPP
TMCO1
SAYSD1
CBY3
SLC22A16
TWIST1
CCNL1
LSG1
CAAP1
HNRNPA3
PRDM10
GPCPD1
SCARF1
RILP
HMGB1
VCP
RBM25
PDE12
PIGW
MYO19
CHEK1
SLC20A1
SREBF1
PLEKHF2
TOLLIP
XPOT
TMED5
CCDC18
CHMP6
CEBPD
REEP4
TMEM117
HNF4G
BRIX1
PRDX1
SLC39A13
GOLGA3
PDE7A
GOLPH3
RDX
TYMSOS
TYMS
EIF2S3
MUC1
CMTR1
SLTM
GZF1
E2F3
PIM3
RPL36A-HNRNPH2
RPL36A
BTK
CCR1
GPIHBP1
MRPL40
HIRA
MYL12A
CEBPG
GFI1
GABPB1
TOP3B
CLPTM1L
LSM8
MTO1
LARP1B
DCXR
LILRA5
TPT1
THUMPD3
KEAP1
HYOU1
PTBP3
SMURF2
PNMA1
B4GALT7
SDE2
ATP5F1A
THEM4
CYREN
MDP1
CHMP4A
OSBPL1A
ZBTB25
ZBTB1
DNM1L
TAGLN2
ENSA
DNAH14
ARFGEF1
SATB1
MYB
PECAM1
USPL1
SNAP47
JMJD4
PYGO2
LOC101928120
ANP32E
EIF4G1
SMAD7
BRPF3
LYN
ZAR1
NXF1
POLR2M
PPP1R35
TRIM27
NOTCH2NLC
EPC1
UQCRFS1
ADGRE5
DGAT1
GRB2
DPYSL2
PROS1
XKR5
TCF12
FDPS
DNAJC25-GNG10
DNAJC25
PET117
KAT14
MCM3
RNF115
POLR3C
COMMD10
LIG3
AIG1
GAREM2
MRPS35
RMDN3
MAN1A2
TBC1D13
DUSP2
FAM168B
BICD2
CIZ1
RBMX
SNF8
FEM1B
PHC3
MYCBP2
USP22
FOSL1
TKTL1
TEX28
PPP1R15B
CLK3
ANKRD36
PDSS2
RBM8A
LAT
IRAK3
S100A9
ATP6V0B
SNX19
B4GALT2
PEX7
QSER1
KITLG
TEP1
RPL29
MOB4
CNTRL
C5
CYP4V2
SMG9
SCMH1
RNASE2
TRIP4
POLR2J3
KLHL20
SYT11
GON4L
RABL6
PHTF1
NKX6-3
STX18
TMEM238
RPL28
ACTR1B
ACTN1
TRERF1
TEX38
ATPAF1
GCLM
MOB3A
IZUMO4
RANBP9
N4BP2
MAD2L1BP
TTC14
TMEM68
TGS1
DHPS
RNF6
BCAT1
ARID1A
ATG10
TRRAP
DNPH1
HSD17B11
SSU72
PRRG4
CHMP7
FRG1
RITA1
DDX54
EHMT1
ADAM15
ALG10B
NRDC
PRPF3
PLAUR
HSP90B1
PHC2
ZBED4
TRIM65
CD58
ARHGEF18
GPR137
BLOC1S6
DBR1
SENP6
WDR70
ANKRD17
ZNF622
WDR1
RCC2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
PARP8
NFE2L2
NAXE
TOR4A
RPP25
COX8A
CHD1L
PRKAB2
EMB
MTRF1
NAA16
DDX23
IFRD2
LAMP1
CTNNB1
FEM1A
PDE6D
COPS7B
UNK
CALR3
C19orf44
TMEM41A
TBL3
TIMM21
FBXO15
ABCF2