ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10144542 | Kasumi-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◣ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◢ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

OSGIN1
GSDMD
INKA1
PPP1R18
CLIP3
VAV1
GTPBP6
LYL1
NFE2
RNF166
LGR6
DRC7
FABP6
TNFRSF1A
LHX6
UBE4A
CYB561
TNK2
TBKBP1
CSF1R
OPRL1
LKAAEAR1
RGS19
KCNK6
YIF1B
TMEM275
CPXM1
DCAF10
TMC6
TMC8
OLFML2A
MTRNR2L1
MEF2C
EVPL
SLC22A16
INTS12
GSTCD
SMG8
DUSP7
CCL3
ARHGAP25
CCL3L3
CCL3L1
FRA10AC1
GNAI2
NFE2L2
DGCR6L
RPS6KA1
SEC14L1
LPIN1
PADI4
FMNL1
NBEAL2
C3orf86
CRYAA2
CRYAA
NFKBID
HCST
TYROBP
KLF2
CD300A
LEPROTL1
CLEC5A
TMEM104
NAT9
RAB37
HHEX
DUS1L
IREB2
HBEGF
GSX2
DPY19L4
UCN3
ARSG
SLC16A6
GPAA1
EXOSC4
BCL3
NINJ2
RXRA
NKX6-3
MYO18A
CD33
TPM3
C1QTNF4
EMILIN1
RASAL3
MTRNR2L2
MSH3
DHFR
CDK9
SH2D3C
KCNK9
HPN
CACNG4
NDST2
NTMT1
EXT1
CCDC149
FAM107B
DMAP1
MMP9
WDR74
B4GALT7
ARHGAP4
SIPA1
ABT1
ZNF792
SDE2
MAP1S
IL17RE
GATA2
DSTYK
LAPTM5
FKBP1A
SLC18A3
CHAT
CSF3R
PHC2
ZER1
PPIAL4G
GRAMD4
ERLIN2
NIBAN3
FERMT1
LTB
LST1
SHANK3
STXBP5
NME1-NME2
NME1
RASSF2
TNFAIP8L2
TACO1
NR1H2
MUC6
UBE2J1
CSRP1
DNAJC10
MAPK6
SH2B3
TCTEX1D1
PSD
FBXL15
SIRPB2
TFAP2E
ANKRD13D
C17orf75
PCNX3
MAP3K11
AUNIP
TOX2
NSA2
GFM2
PPIAL4C
GCNT1
HNF4A
CTRC
INAFM1
OLIG1
WDFY3
FGGY
CRACR2A
BTBD19
TCTEX1D4
RAB24
PRELID1
MXD3
SEMA4B
ZNF384
TBC1D19
TACC1
PPP1R27
MCRIP1
PLEK
NTNG2
LIMS1
TNFSF14
SERPINB9
ACOT11
FCMR
ALDH8A1
TOR1AIP2
TOR1AIP1
GMFG
CCL4L2
BMS1
CXCL1
SPN
ITGB2
OR4D1
C3
NFKB2
TEAD3
SMIM33
CELF2
DUX4
FGF7
TOP3B
RHOF
ELMO1
IKBKE
UNCX
USP15
STXBP4
COX11
RNF220
CDYL
TMEM72
TFF3
NDUFS3
KBTBD4
ZNF595
POMP
SBK2
STX16
RPS19
MAN2C1
GRPEL2
CYTH4
STAB1
NAPRT
MROH6
CNPY1
EIF1AD
BANF1
CD82
TMEM154
KCNIP2
IL16
PLEC
CALML4
CNPY3
PTPN6
GRB2
CCDC170
TMEM242
MC1R
TBXA2R
GALNT9
C8orf58
CCAR2
SAR1B
ARHGAP30
MYO1G
MPO
ACBD5
SIRT4
SLC39A4
CPSF1
ADAP1
UNC13D
SCAMP2
IGFBP4
LMO2
SAMD11
LUZP1
PPP1R9B
GMCL2
STAT1
ACY3
LMBR1
ARAP1
SLC43A3
ARL5C
PSCA
GTF2H2C
GTF2H2
MITD1
RASA4B
TMIE
ALS2CL
SCML4
DDX1
IL6R
FASLG
ZNF467
RCSD1
GAS2L1
S100A9
RPS14
SNUPN
ADAM10
MLXIP
GLRX
PPIAL4F
PPIAL4E
PPIAL4D
EPHA1
STAT6
GABPB1
GALK2
ANKRD17
COPS2
HDGF
LIMD2
MYEOV
PRAM1
RASGRP2
KCNN4
P2RY8
LILRA2
SYCE2
SPOP
CBFA2T3
LOXL2
SIAH3
CCZ1B
DGKZ
PHF20
DUSP3
CFAP97D1
TBC1D10C
PPP1CA
AP3S2
PPIAL4A
SIGLECL1
CBX2
SYTL1
CDK3
FFAR3
USP30
PSMF1
ZFP64
PPFIBP2
LINGO1
SYNJ2
NLRP3
TTC4
EXOC3L1
E2F4
TMIGD2
FSD1
DENND4B
SQSTM1
COX16
TLR1
TTLL8
ZNF408
ARHGAP1
APPL2
TNFSF9
MCTP1
SLC22A13
PNRC2
SCGB1C2
CCL19
SEPTIN9
LSM4
HIGD2B
BBS4
SULT1B1
HIF1AN
XRN2
NFRKB
LTB4R
CIDEB
LTB4R2
FARSA
CALR
DUSP6
ARHGEF2
PIK3CG
CD1C
ST3GAL1
RGL4
GTF2H2C_2
RAD54L2
ARPC3
ETHE1
RSU1
FCAMR
THUMPD3
RNASET2
RUNX2
TM6SF1
ARHGEF12
MYL12A
CEBPD
NCF4
SYNE3
NDUFS7
KBTBD2
LAIR1
IRAK3
GHRL
PEX3
ADAT2
SDHAF2
CPSF7
TMA16
TSPOAP1
TP53I11
FOXI1
SNAP47
JMJD4
IPO4
TRIB1
STPG3
NELFB
PPP1R16B
ATP2A3
DLX4
CACNA2D4
P2RX1
SLC39A3
CHRM3
LIMS4
LIMS3
PSTPIP1
FAM227B
DTWD1
ATG16L2
SPAAR
HRCT1
SNRPD3
GUCD1
MTIF2
HNRNPA1L2
NEDD9
GPR68
PARVB
GIMAP1-GIMAP5
GIMAP1
TTR
LRRC59
GTF3C3
AAR2
YWHAB
SEC22B
RARA
CEBPE
CASC3
AIF1
TM7SF3
USP24
ST8SIA4
NCF2
PLEKHN1
GGT5
TSSC4
NABP1
IPCEF1
CCN4
TMEM41A
SCNM1
LYSMD1
CDK5RAP1
TAF12
NOXA1
RNF149
ANXA11
AGAP2
TSPAN31
SNX10
AK1
JRK
DCAF12
TRAF3IP3
ADGRE1
OR4K3
OR4K2
DNAJC25-GNG10
DNAJC25
TUT1
CHCHD5
USP3
ATP11A
NEK6
TMIGD3
ADORA3
CXCL2
CALML5
ALKBH3
MTMR9
MRPL1
TMEM123
GNPDA1
CORO1A
ANKRD33
SERPINA1
MRPL58
PRRC2A
IPPK
PSMC2
DNAJC2
KDR
GAPT
AURKAIP1
TEKT2
ADPRS
UBXN8
ZNF622
NOS3
HPCAL1
INPP5D
C1QTNF1
ADRA1A
ONECUT3
ATP6V0A1
YES1
ADAM8
NEFL
WDR97
MAF1
STMN3
RTEL1
TTI2
URM1
RASSF5
STAP1
RAC2
PRR5
DOK4
HOPX
LYG2
GPX4
GSTO1
ITPRIP
BID
EMC3
CAMP
RORC
CLTC
H4C12
CENPC
PIGV
PRKAA1
WNT7B
BPI
MS4A3
CLEC4O
GBP3
SLC39A13
SH3BP2
ROPN1L
TGIF2-RAB5IF
TGIF2
SLC66A1
AKR7A2
SSBP4
H4C15
H4C14
WDR36
FERMT3
DCP1A
C12orf57
ZNF391
SUN2
ZP3
OSM
NR1I2
GALNT3
GRK2
LPCAT1
UBE2V1
ULK4
FLI1
MAP1LC3B2
SEMA6B
LTBR
MLEC
ZNF696
CACNB1
NT5C2
PDE4D
IFITM2
SCNN1A
FAM207A
DHCR7
NADSYN1
EVL
EFHD2
SEC14L5
TRPM6
SLC13A5
AURKC
CD2
PLAC1
TRIP4
MRTFA
NOP16
HIGD2A
ZNF784
GNAI3
SPTBN1
PLCB2
MILR1
TPRKB
SLC12A6
PMVK
SUPT7L
SLC4A1AP
LDB1
GSN
ARHGDIB
ADA2
NUP210L
NOL12
ANXA2R
VPS26A
CSNK1G2
PVALEF
AATK
SSBP1
WDR11
MRPL40
HIRA
SNRPB
ADRM1
CARD8
NR3C1
CFLAR
STXBP2
CYTH3
KLHL6
NFAM1
CLEC4E
BRF2
PAG1
CHST12
CLEC11A
SHANK1
ALG10B
PTPRG
RAB3IL1
STX18
FAM228B
SF3B6
INTS4
ZNF787
BSG
BTBD1
BHLHE40
UNC5B
RASGEF1A
EGR3
PEAK3
BEST1
AVIL
YIPF7
C5AR1
SMG7
LARP1
TANK
SYTL3
RASA4
TLCD5
CABP1
ZMPSTE24
PRRC2B
TRABD
ETV6
LYSMD2
ATN1
TMOD2
RGS14
APBB1IP
TTYH2
SIGLEC9
CYP2E1
NUF2
MDM4
RPS7
ARHGEF18
STING1
UBE2L6
CTSG
MS4A7
RAB44
MTRNR2L8
DR1
ANKRD40
MALT1
SCRIB
KLHL20
TBC1D13
MZF1
GLS
HEXB
CXCR5
CASP8
CENPI
TMEM121B
S100A8
MADCAM1
RASGRP4
KCNIP1
RP1L1
POLDIP3
SLC44A1
SDHAF3
PTBP3
TSC22D4
NYAP1
SLC48A1
TAGAP
SIGLEC5
ZBTB45
DSCC1
PPIL3
NIF3L1
ABCD3
SLC22A4
SEMA4A
MN1
MMRN1
TDP2
ACOT13
WT1
LYPD8
EIF3F
VPS13B
ITGB3BP
EFCAB7
PTPN7
ANPEP
RNASE7
EFHB
CARMIL1
SH3TC1
STX1A
SLA
SIGLEC7
UTP3
ARHGAP28
SLC17A9
PODNL1
CTU2
MACC1
FCGRT
GP6
ZFP36
CSRNP1
RASA3
ZNF385A
VSIR
SLC18A2
POPDC3
A2M
PLEKHA2
ESAM
RGS18
POTEH
MMEL1
PPIAL4H
C12orf71
KMT2D
RAB11FIP1
MICAL1
PROSER1
NHLRC3
GPSM3
COMT
CSK
TRPM2
PBX2
FBRSL1
WNT16
CCL4
SPNS2
MAP7D2
SF3A3
PARP2
PRKAG1
TBPL1
RNGTT
FBXL5
PXK
CD4
MTF2
GTF2H3
EIF2B1
SLC1A5
FLOT1
IER3
CCM2
ZNF655
NPEPL1
SASH3
KCNQ5
TCHHL1
CCDC77
KDM5A
INTS1
INTS6L
LY86
C1RL
IRAG2
CLDN19
TIMM23
DOT1L
ADORA2A
STON2
RILPL1
SIGLEC12
GNGT2
ABI3
FBXO11
LBR
KLHL21
GNG2
GNG14
SNU13
RGL2
MLKL
MYO15B
IFITM10
ZNF33A
MAPKAPK3
AMPD3
LRCH1
NMNAT1
LZIC
SNRNP200
SAMD10
PRPF6
PITPNM2
CD69
MFNG
ANKRD22
LGALS12
PLD1
SIGLEC6
CD244
GIMAP6
REXO4
ADAMTS13
FAM89B
ZNRD2
PRRG2
NOSIP
LYRM1
DCUN1D3
RMDN1
GRK6
SBNO2
PHF19
DUSP1
DEF6
TOR4A
EHBP1L1
RAP1GAP
MAP4K2
FTHL17
SMIM35
LAMP1
CIB3
ZNF565
KLF6
ZNF718
CKB
FSCN3
CPA3
MRPS18C
HELQ
APOM
BAG6
ARRB1
RASGRF1
NLRP12
LPIN2
SIGIRR
ARHGAP27
MYLK
NR2F1
TBX2
TARP
RHEX
PTK2
LAX1
DENND1A
ASB2
TGIF1
POLI
ST3GAL5
S1PR4
CMTM3
RASGRF2
SULT1C2
ITPKB
HSP90AA1
IGSF21
ARL6IP4
MED14
S100A3
BCAR1
AGTPBP1
ITGAM
LINC01638
PHB2
PPP1R11
IL10RB
FBN2
SH3TC2
SVOPL
SYNGR1
TMEM53
ARMH1
IGFBP7
AGRN
OAZ1
HK2
TMEM125
FBXW4
PPP6R1
ZNF581
ZNF580
CCDC106
MARCO
P2RY14
PLSCR1
TNFRSF9
MED23
SAMD3
SMIM6
CNKSR3
WAS
DDX23
H3-3B
IFRD2
HEXIM2
CCNL1
KMT5B
CTNNB1
RNF151
ZC3H6
FEM1A
PDE6D
COPS7B
UNK
EIF2D
CALR3
C19orf44
NOTCH2NLC
TBL3
TIMM21
FBXO15
BRWD1
ABCF2
UBC
NCBP2AS2
NCBP2
MRPL21
IGHMBP2
CALCOCO1
UCKL1
ATAD2
TSNAXIP1
RANBP10
PAFAH2
PPRC1
PPP5D1
CALM3
CHPF2
GSPT1
TMEM199
POLDIP2
POLR2J3
SOD2
HMGB1
NOTCH2NLA
TMEM222
WTAP
WDR53
FBXO45
SPATC1L
CALM1
GATB
FOXJ3
CLPB
OPA1
FRG2C
SSNA1
ANAPC2
RBL1
TSN
CCDC88A
SEC13
TOMM22
SPNS1
CALM2
LRP6
MRM3
GLOD4
ZSCAN22
CYCS
ORMDL3
NOTCH2
MRTO4
EMC1
TCF3
RPL8
COPS8
TIMM22
KBTBD7
UBB
BTRC
NUP214
ZNF34