ChIP-Atlas: Target genes

Potential target genes for CDK9

Query protein: CDK9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX728780 | THP-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CDK9's Target genes

◢ CDK9: Average

◢ SRX367328: 293

◢ SRX367329: 293

◢ SRX367330: 293

◢ SRX5255096: 293

◢ SRX5255097: 293

◢ SRX5255098: 293

◢ SRX5255099: 293

◢ SRX535453: A-375

◢ SRX535454: A-375

◢ SRX5501657: A-375

◢ SRX5501659: A-375

◢ SRX5501661: A-375

◢ SRX10131662: Bronchial tracheal epithelial cells

◢ SRX10131663: Bronchial tracheal epithelial cells

◢ SRX20436771: DLD-1

◢ SRX20436779: DLD-1

◢ SRX22001291: DLD-1

◢ SRX22001292: DLD-1

◢ SRX22001293: DLD-1

◢ SRX10715331: HCB1

◢ SRX10715344: HCB1

◢ SRX1078843: HCT 116

◢ SRX1078844: HCT 116

◢ SRX1177906: HCT 116

◢ SRX6066502: HCT 116

◢ SRX6066503: HCT 116

◢ SRX6066504: HCT 116

◢ SRX6066505: HCT 116

◢ SRX1013341: HuCCT1

◢ SRX1013342: HuCCT1

◢ SRX20230567: Ishikawa

◢ SRX20230568: Ishikawa

◢ SRX20230569: Ishikawa

◢ SRX20230570: Ishikawa

◢ SRX20230571: Ishikawa

◢ SRX20230572: Ishikawa

◢ SRX20230573: Ishikawa

◢ SRX20230574: Ishikawa

◢ SRX10144542: Kasumi-1

◢ SRX10144543: Kasumi-1

◢ SRX3408659: KELLY

◢ SRX3408661: KELLY

◢ SRX7366779: MCF-7

◢ SRX7366780: MCF-7

◢ SRX7366781: MCF-7

◢ SRX7366782: MCF-7

◢ SRX7366783: MCF-7

◢ SRX7366784: MCF-7

◢ SRX244177: MM.1S

◢ SRX244180: MM.1S

◢ SRX327758: MM.1S

◢ SRX327759: MM.1S

◢ SRX447603: MM.1S

◢ SRX1735799: MOLM-13

◢ SRX1735800: MOLM-13

◢ SRX1637467: MOLT-4

◢ SRX1637469: MOLT-4

◢ SRX1637470: MOLT-4

◢ SRX24723215: MRC-5

◢ SRX24723217: MRC-5

◢ SRX24723219: MRC-5

◢ SRX24723221: MRC-5

◢ SRX2375362: MV-4-11

◢ SRX2375366: MV-4-11

◢ SRX14127531: OCI-AML3

◢ SRX14127532: OCI-AML3

◢ SRX14127543: OCI-AML3

◢ SRX14127544: OCI-AML3

◢ SRX18455086: OCI-AML3

◢ SRX18455087: OCI-AML3

◢ SRX148962: P493-6

◢ SRX148963: P493-6

◢ SRX148964: P493-6

◢ SRX203390: Plasma Cells

◢ SRX203391: Plasma Cells

◢ SRX4023329: T-47D

◢ SRX4023330: T-47D

◢ SRX728779: THP-1

◣ SRX728780: THP-1

◢ SRX9730732: THP-1

◢ SRX9730733: THP-1

◢ SRX9730734: THP-1

◢ SRX9730735: THP-1

◢ CDK9: STRING

DCAF12
RLF
ZNF684
C8orf58
CCAR2
IPPK
ZMPSTE24
EXO5
CD33
SCNM1
LYSMD1
CAP1
ZFP69B
GRPEL2
MTMR9
LAMP1
SH3BP2
CD1C
ALOX5AP
CAB39
GLRX
ITGB2
TEAD3
CSF1R
RPS19
WDFY3
ITGAM
NFYC
NLRP12
NCF2
RXRA
NCF1
LGALS8
SUN1
STEAP4
PNP
RAB3IL1
PGA3
NDUFS2
ADAMTS4
SNRNP200
S100A8
FAF1
IL1B
RAB24
PRELID1
TLE3
PGK1
SPATC1
ZFP69
VTA1
NMBR
TSSC4
IL7R
CD244
PPT1
HBS1L
HAUS6
ABT1
MTF2
GPBAR1
EXOSC3
MRPS18C
HELQ
ARHGAP30
TRIT1
SP110
SETDB1
FCER1G
PGA5
CITED4
CEBPD
FRG2
FLI1
RMND1
ARMT1
EXT1
IPCEF1
TP53I11
RASA1
SLC12A6
NOP10
NUTM1
PPIH
PGA4
SPDYE13
MRPL24
CMIP
PDLIM2
FCGR2B
ARPC3
TMEM154
RMDN1
COL9A2
SNAPC3
IL16
DUSP7
SASS6
RNF149
NDFIP2
IFRD2
MTPN
LUZP6
FCAMR
NUF2
UCKL1
MTRNR2L8
POMP
ZNF408
ARHGAP1
VCPIP1
C8orf44-SGK3
MMP9
PRR5
CCND3
UBR7
GON7
SRSF11
LRRC40
NIP7
COG8
TLE4
THYN1
ACAD8
SREK1IP1
CWC27
CARD8
MFSD2A
ARPC2
FAM207A
RNPEP
GPR68
PPIAL4F
PPIAL4E
PPIAL4D
FOXJ3
CMTR1
RASSF5
ZNF410
HIBCH
SMAP2
MIA3
DISC1
ATP5MPL
MMACHC
CCDC163
RPL37
SLC25A32
DCAF13
MSH6
FEM1A
VPS33B
RAPGEF1
RUNX1
UBAP2L
C1orf43
HEATR1
RWDD1
TFB2M
CNST
CEACAM21
CUL7
ATG5
TIGD4
ARFIP1
PPP1R12C
URM1
EIF3D
STK4
PTK2B
TRIM35
SORBS3
UBAP1
EIF2D
SELENOH
YES1
EPRS1
ADGRE1
NOTCH2NLC
KHDRBS1
MEFV
TNFAIP8L2
ANKRD33
ZNF484
TMEM30A
SUSD6
CBWD5
MAP2K1
USF1
RUBCNL
ZP3
MOB4
RTF2
UBXN8
HMGB1
USPL1
TMEM59
MAP1S
UCHL5
RO60
NIBAN3
FCRL4
TNFAIP1
IFT20
INTS9
HMBOX1
TIPRL
DNAJC10
ADGB
DCP1A
CHMP4B
TMEM127
CIAO1
PISD
MXD3
OAS3
CCL3
CCL3L3
CCL3L1
TTC14
WDR70
TOMM20
MRPS31
DOCK8
CD1A
GPAA1
EXOSC4
MED18
CPNE5
ZNF197
XRCC5
TPRKB
DCAF10
ARID2
LTB
LST1
WDR55
SERPINB13
HARS2
HARS1
CLIC5
TMEM104
NAT9
TGFBR2
SIGLECL1
TIMM21
FBXO15
DGAT1
PEX12
UXS1
SIGLEC11
INAVA
MDM4
C4orf3
TTC13
INPP4B
UTP3
KIFAP3
RNF151
TBL3
GTF2H2C
GTF2H2
CXCL1
UGGT1
ZNF696
CCL26
IKBKE
TAGAP
CCL2
ATP6V1C1
STK36
RNF25
RGS12
DMRT2
FPR1
LCP2
SCAMP2
SIGLEC9
WDPCP
MDH1
OSCAR
NDUFA3
CBWD1
MYBL1
SLC33A1
NECAP2
RPL8
TEKT2
ADPRS
CTSG
CCL4L2
ATP6V1G2
NFKBIL1
SCAF11
C6orf89
ARHGEF1
MAP3K7CL
CCT8
THAP6
UBLCP1
IFNGR1
KBTBD6
TMEM53
ARMH1
NDUFS3
KBTBD4
ZNF622
FKBP1A
VPS25
RGL1
ARPC5
NOXA1
MRPS23
EIF2B3
NSUN5
JAML
ACTRT3
RNF141
PRPF3
AGTRAP
RAC2
SNX19
LRFN3
DR1
ASXL2
HAX1
RTCA
ATG16L1
MIDEAS
PDCD2
ZNF227
GCLC
B3GALNT2
TCF12
PIGM
DUX4
EMILIN1
OSM
P3H1
FCAR
PPP1R12B
WNT2B
PEX3
ADAT2
SDCCAG8
CEP170
N4BP2L2
GOLGA7
NOL11
AOPEP
CBWD2
SDHAF3
MTRNR2L2
MSH3
DHFR
PKD2L2
OTUD7B
DENND4B
ROPN1L
SCAF1
RRAS
RRS1
ADHFE1
TADA1
TRPV4
PIGU
GOSR1
MTMR14
GALK2
COPS2
TPK1
NOTCH2NLA
ARHGEF12
AGGF1
FUCA1
SLC35B4
AKR1A1
MFSD10
CALCOCO1
ZFYVE1
MTRNR2L1
TRIP4
FBF1
CAPG
PIKFYVE
MARCO
FBXO46
MEIOSIN
PSMD7
FAM120B
TOR4A
CCL17
MRPL10
LRRC46
APPL2
SF3B1
RALB
ACAD9
TATDN1
NDUFB9
EXOC3L1
E2F4
ZNF780A
ADGRG5
CEP350
SNX3
CHCHD5
GOLGA5
ZNF56
PACC1
CALHM6
CLDN19
ACVRL1
WDR61
PIGBOS1
PIGB
TCTEX1D1
STAU1
TMEM186
PMM2
NOB1
PHACTR4
ZNF331
MAMDC2
TAF11
ANKS1A
PRKAB1
CSF2RB
SIGLEC16
THOC5
NME7
BLZF1
STARD6
C18orf54
CCNL1
GET4
CLPP
C1orf74
SLC22A16
FAM227B
DTWD1
CBWD3
THAP12
GVQW3
UCK1
FCGRT
FRG2C
SLC24A1
INTS14
TBPL1
PDPR
KLF2
PA2G4
SNRPC
TAF12
ZNF142
BCS1L
PPIAL4H
GSPT1
ZNF337
CSRP1
MRPL17
ITGAL
KBTBD7
XRN2
IPO8
SRSF4
NR1D1
FASLG
IBA57
NOL6
OPA1
SYMPK
FOXA3
UBL7
THOC3
TERF2
NFX1
LOC100289561
DESI2
TPM3
TLE1
AP1B1
WIPF2
PRKCD
UBR1
A2M
INTS1
KATNBL1
CXXC1
MAN1B1
PLEC
SEMA4C
TOR1AIP2
TOR1AIP1
DAP
ARHGAP25
SUCNR1
JOSD2
ASPDH
RPL37A
GTPBP10
RPS6KA1
PPCDC
HK3
ORMDL3
PHB
BRIX1
YKT6
FITM2
S100A2
CARD19
ELOF1
RPL27
DYNC2H1
DUSP6
DBI
C2orf76
DNAJC16
CASP9
TAF13
NAPG
ATP5PO
RAD50
ADAMTSL4
LAMTOR5
PDF
PICALM
HDDC2
PHC2
CCDC149
RANBP3
GUK1
PGBD4
EMC7
HSPA13
TBL2
NLRP3
LILRA2
SLC18A1
MRFAP1
IRAK1BP1
CFAP298-TCP10L
CFAP298
GLI4
EML6
TPT1
WDFY2
C22orf34
SSNA1
ANAPC2
GTF2H2C_2
CCDC30
SPG11
ZMYND12
PPCS
LYPLAL1
OAS2
AP2B1
NCSTN
COPA
SLC31A1
FKBP15
OCSTAMP
ZNF668
ZNF646
SF3A3
CIAO3
MED10
SLC37A4
IGSF10
SLC39A1
CRTC2
NUP133
MDN1
TBC1D23
GNAI2
PUM1
ADAM10
TSN
RAB1A
HUS1
MTFR1
KCTD5
RNF14
TMX1
MLKL
TUBA8
NFAM1
EMP3
AFG1L
RRM1
SF3B5
CCDC114
PPIAL4G
CEACAM4
RPIA
MEF2C
BOD1L1
TCTE3
ERMARD
CALR3
C19orf44
AHCTF1
ZCWPW2
AZI2
NUP58
TLN1
CREB3
RPL29
RPS16
NR3C1
RNF181
TOMM6
PES1
TRAPPC4
RPS25
PPME1
C2CD3
ZNF697
TCN2
RPL5
VCPKMT
C1orf54
APH1A
VPS26C
MPZ
LMBR1
RGPD1
RGPD2
BID
BOD1
COPB1
ROGDI
SMIM22
ANXA2R
SEMA4B
OBI1
CHN2
ADORA1
ACP3
BOLA1
ADSS2
ETNK1
TRMT11
C1orf198
SYNE3
GOPC
MAPKAPK2
CTU1
GTF2B
RHEX
ZFP64
ADAP1
CCL22
MRPL55
FRG1
DNAH14
SIGLEC6
ATG7
CSNK1A1
GNPAT
C1orf131
SYNGAP1
CUTA
MED23
RPL22
SART1
SRP9
ZNF614
SLC1A5
USP3
NBR1
GIMAP8
CTDP1
ZW10
ZNF350
IL6R
MRPS35
SRPRA
OCIAD1
DECR1
CATSPERE
SNAP47
JMJD4
CBWD6
KIF15
KIAA1143
RAB44
DHDDS
UBE2V1
KIAA0513
CERS2
PARVB
ANXA9
IL1RN
PPP2CB
GRK6
KCNK6
NKAIN1
ZC3H6
ADAM17
TRIM37
SNX17
EIF2B4
LTA4H
RSL24D1
NGB
XRRA1
SPCS2
NUP155
MTMR6
S100A9
VIRMA
SH2B1
TUFM
PUM3
SEC14L1
GTF2E2
LAPTM5
CNOT1
CLEC16A
DEXI
NOTCH2NLB
NKIRAS1
RPL15
SNAPC5
SKP2
LMBRD2
SLC35F6
MEN1
TRIP11
CHMP7
EEF1AKNMT
ARID3B
FIGNL2
CTNNB1
COPS8
MED4
TBRG1
ZNF12
C1orf100
NUDCD1
RIC8B
ZNF140
RPL36
GZF1
NDUFC1
NAA15
CHMP5
BAG1
ESRP2
CCDC146
LTN1
GGPS1
ARID4B
LAMTOR1
ABCD3
ZNF318
STON2
RPS7
PPP1R11
CGAS
TNNI2
LILRB4
USP15
MRPL44
DCPS
ZNF397
ZNF221
ABCA3
VIT
RPS20
HIGD2B
BBS4
DDX41
RPL38
ORC5
AHI1
COX7A2
TLR4
OR4Q2
CCDC150
EMC8
COX4I1
RPL11
ZNF354B
RNF216
BIN2
POLN
HAUS3
RARA
INPP5D
APOL2
GBA
RC3H2
TRIM25
RASA3
CD5L
MCOLN1
PRRG2
NOSIP
EED
LYNX1-SLURP2
LYNX1
BHLHE40
THRAP3
KIAA1586
NSMCE3
SYK
GHRL
BRF2
ZNF26
TBP
PSMB1
LONP2
ABCC11
DAB2
TRIAP1
TMEM208
LRRC29
CNPY3
LIN54
SEC22B
CTTN
PPP6C
LTO1
PNPLA6
IPO13
ERI1
LATS1
MAK16
POM121
EFHC1
PTK6
CD53
SMARCD3
NCBP2AS2
NCBP2
CRBN
SLC44A1
PSMD9
HPD
YWHAB
SGO2
NDUFAF6
PSMA6
SPINT1
SLC35F5
AVIL
MAD2L1BP
GTPBP2
PCBP2
ZNF225
CTR9
UTP23
CDC42
OAF
NCKAP1L
LILRA1
NOTCH2
ZNF567
ABCB10
ATP2B4
TRMT61B
MAGEF1
WDR7
KIF2C
TESK1
CNIH4
UFL1
PTTG1IP
TRIM55
OAS1
SEC13
INTS12
GSTCD
ZNF230
TOMM7
YTHDF1
LMO2
CYB5R1
THEMIS2
MRPL16
GABPA
ATP5PF
ZBTB22
DAXX
GNAI3
SLA
FAM185A
KLHL20
WDR36
SMIM26
ZNF354C
ZC3HAV1
NPRL3
SLC30A7
EXTL2
SLC7A6OS
PRMT7
ST7L
CAPZA1
AGT
SSBP1
TPR
ODR4
WSB1
TAF1B
ZNF549
TCHP
DOK2
GRK2
DNAJC5B
DDX23
TOMM22
WASHC5
NSMCE2
SKIV2L
NELFE
ZC3H11A
ZBED6
EPN1
ALG10B
ZNHIT2
FAU
CEP63
ANAPC13
NCF4
DEDD
UQCRC1
SPRTN
EXOC8
SNU13
FGR
IFITM2
TM6SF1
ZNF212
NAPB
RNF139
KATNA1
UBE2Q1
DUS3L
PPIL4
VKORC1
UNC50
COA5
MRPL45
SYT11
GON4L
SRBD1
TMEM222
NDUFV1
SPHK2
RPL18
FAM83E
ERLIN2
DNTTIP2
DDX18
FAM200B
WDR27
C6orf120
STAT2
APOF
AP3B1
TEP1
BCL2A1
SIGLEC7
RRP15
SAMD4B
TRIM46
KRTCAP2
TNK2
MED15
ATP6V0B
DPH2
B4GALT2
PPP1R15B
WDFY1
PROS1
ICAM1
HMGCL
NDUFAB1
TIGD6
HMGXB3
ZNF189
MRPL50
PKN2
FBXW2
DHX15
SHPRH
BATF
ZNF721
PIGG
TTC33
TAB1
MTERF1
SMIM15
TCTEX1D2
AMD1