ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX059714 | VCaP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◣ SRX059714: VCaP

◢ HDAC3: STRING

RAE1
PASD1
SLC45A4
DNPEP
TENT2
PIK3AP1
NUDT3
FRMPD1
GALNT18
RUVBL1
EEFSEC
CXCL8
TMEM40
JPH4
TIPARP
SCML1
IFRD1
BCL2L13
NUDT10
PPP1R15B
TBL1X
UGT2B10
JPH3
DAAM1
ATXN2L
MAX
KRT4
DDX19B
AARS1
ANP32E
WDR74
ZBTB18
NFIC
ERCC1
DGKK
POLR2J3
PRRT1
ATP6V1G1
TMEM204
DHX36
IFT43
NOVA2
DUSP6
ISX
TMEM100
GABRA2
TLK1
DPP9
BDNF
ARHGAP22
CLDN8
ARHGEF38
IGFBP1
TMCC2
VSTM5
SLC29A2
PDGFA
UGT2B28
HDGFL2
ZNF771
CYP3A43
KCTD7
IFNLR1
MKS1
FAM222B
CA8
SLC30A4
VAT1
MTRNR2L2
TMEM237
MAPKAPK3
STK32A
NEBL
PFKM
TRIM49D2
TRIM49D1
LBHD2
UGT2B11
SLAIN1
ALDH3B2
SAXO2
EFL1
PHGR1
MACROD1
ITPRID1
TPT1
DECR1
SIN3B
PYCR2
EDN3
SMIM13
FKBPL
PFKL
HIVEP1
PHF19
TTC7A
MCFD2
ATXN7L2
CMTR2
MPP1
TMSB15A
GPR173
PRDM1
TRAF3IP2
GAPDHS
PHACTR4
SHF
WIZ
WRNIP1
NME4
WASHC3
TRIQK
ZNF341
MTRNR2L8
TASOR
C1orf116
CPLX1
SRRM4
C4orf51
TTLL12
TRABD
CDKN2AIP
CCN5
CD99L2
SCAMP2
RGL3
RNF115
USP30
LOC114841035
FKBP2
LMOD3
C3orf14
MNS1
MYH10
HOXC6
UNC80
MOGAT2
INPP5K
RGPD2
RGPD1
PAX6
NUP160
MAPK12
CDKN1A
SOCS2
ZDHHC9
TMPRSS11F
SNAI1
MTNR1A
ZNF287
PIH1D2
NKAPD1
HSPA12A
ENO4
SPIDR
BBS1
FAM107A
ZNF547
TRAPPC2B
G3BP2
NUTF2
CENPT
ADGRG7
COPRS
RHOH
ATL3
XKR9
LACTB2
REP15
CDK3
STX16
FZD1
THAP4
GPX5
CYTH1
ITGB3BP
EFCAB7
ZG16B
FAM214A
BCAR3
NME1
PMVK
DDX39B
PF4
CDHR3
DHRS13
C9orf152
SYVN1
GREB1
SMOX
HERC5
ZNF200
MRPL48
RGS3
FAM107B
SIRT4
NBR1
MAP3K6
NFKBIA
SUGCT
MPLKIP
MAD2L1BP
GTPBP2
ST3GAL6
KRTAP9-6
DNAH5
MRPL21
IGHMBP2
H4C3
RUNX1T1
CHMP4C
ITPR3
VPS13B
SREBF1
LFNG
LPCAT3
MED30
C11orf24
DNASE2B
TBPL1
GOLPH3
IL20RA
CCDC68
ADAMTS3
SKIL
ATL1
MAP4K5
MPHOSPH10
MCEE
UBB
SMAD4
RP1
DPY19L4
SYNM
HEXIM1
ANO6
RPS27
HEXA
MRPL11
GRB7
LAMP1
ALDH18A1
HNRNPA2B1
CBX3
SLC39A10
GET4
WDTC1
AP5Z1
EPC2
DDX17
EIF4G2
STRBP
TMEM199
POLDIP2
WASHC2A
SLC25A25
NAIF1
GABARAP
SEPTIN7
KAT5
WASF2
MRPL45
ERAL1
WASHC2C
NEURL2
CTSA
UBE2Q1
SFSWAP
GPR137
CDK4
BAD
HAGH
FAHD1
GSK3B
NAGPA
SPNS1
ATP6V0D1
RSF1
AAMDC
MSMO1
CRBN
RBBP8NL
UBE3B
KCTD10
RPGRIP1L
FTO
TRMO
RBM48
PEX1
MTRNR2L9
GRHL2
PSMD3
DAGLA
MTBP
MRPL13
MDM2
FAM72D
FAM72C
SUMF1
SLC35B1
CUTA
STARD3
RPUSD4
FAM118B
C8orf33
TOMM22
CLCN7
SMARCD2
USP49
C1orf174
SUPT7L
SLC4A1AP
DDX42
CCDC47
SRSF1
ISY1-RAB43
ISY1
ILF3
TRIB1
POLR3F
DZANK1
RBBP5
HES1
MTHFR
CLCN6
SERPINI1
PDCD10
COMMD9
GBA
ZZZ3
STAT6
TSR3
GNPTG
LZTR1
VPS50
HEPACAM2
MAN1B1
THAP7
UNC13D
BHLHE40
VPS33A
PGAP3
ERBB2
MIEN1
ZNF335
POLR2J
SLC35A5
ATG3
OSGEP
APEX1
TRMT2A
RANBP1
METTL25
CCDC59
IDH3B
PSMB7
UVRAG
SUPT6H
SDF2
FANCA
CLPTM1
AURKAIP1
SUPV3L1
GOLM2
TFPT
PRPF31
SNRPE
SMN2
SMN1
MCOLN1
YJU2
BLOC1S1
DMAC2
VIRMA
TET3
RAD9A
RPS26
C5orf51
SALL4
WASHC5
NSMCE2
TBRG4
ATF3
ZNF408
ARHGAP1
MOCS3
DPM1
XPO7
SLC25A53
MRTO4
EMC1
NUP214
PDAP1
BUD31
SRI
YAP1
POLR2J2
CLN3
TSFM
GET3
HPS5
GTF2H1
TOP3A
SMCR8
PAXBP1
SLC25A45
CDKAL1
INO80C
FAM72A
CASC3
ATP5MF-PTCD1
ATP5MF
AMDHD2
SAP30BP
RECQL5
CEP162
TRMT1
SLIRP
ALKBH1
MFSD1
FLOT2
PPP6R1
DOK7
ZSCAN22
U2SURP
ZNF165
DVL2
ZNF383
SENP1
AXL
CDK12
ZSCAN25
TAS1R1
NOL9
SLC4A2
C16orf91
FLOT1
ZDHHC6
VTI1A
GATB
ZBTB45
WWOX
DDX41
ATAD2
NDUFA2
IK
EIF2D
SMG7
GFM1
PMS1
ORMDL1
KRR1
CCDC200
RTF2
NDUFA4
VAC14
SLC25A11
RNF167
PCIF1
MRPS15
UBE2B
CDKL3
KAT8
PIP4P1
FAM83A
PHAX
DNAJC11
RAD51AP1
ECH1
C12orf4
INTS10
GP1BB
E2F6
ZNF576
IRGQ
ZNF668
WBP2
SSBP1
ARHGAP32
MEMO1
UBE3C
NUP107
CCDC97
MOB1B
SUPT4H1
MEF2C
UBE2I
HUS1
RRP15
NGDN
CCNT1
KANSL3
PTBP1
PSME3
TRIP4
TNC
HNRNPH2
GLA
SEMA3B
KCNMA1
UBAP2L
C1orf43
PPWD1
CENPK
WDR62
THAP8
MRPS7
GGA3
TRAF4
UBQLN1
TPP1
TJP2
LIMA1
BIRC3
SUMO3
SH3GL1
SLC33A1
THRAP3
GPATCH3
LANCL2
SEPTIN9
CLSTN1
ATG14
EIF5A2
ST7
RPTOR
DHX35
ANKS6
ELP3
EPS8
HM13
ZNF2
SPATC1L
DAZAP1
NDUFS7
MIER1
TXN2
SUSD4
XRCC5
TBC1D30
GNS
PSMD1
SLK
LRRC29
CACTIN
ADGRB3
DENR
VWA7
FGGY
RTEL1
MRPS11
MRPL46
MAP3K7
TMEM116
ERP29
ADGRL1
ALG6
SHLD2
GLUD1
VPS11
SUMO2
NUDCD3
ABCB8
NOP16
HIGD2A
AAAS
SCAMP5
LSG1
OAZ3
TIMM23
TSN
DICER1
ZNF497
ADAM23
DDX23
PLAGL1
BAX
OTUD7A
FAIM
TNPO3
ZNF524
KDM3A
FIZ1
NCBP2AS2
NCBP2
PDE4DIP
LMAN2
RXRA
SH2B1
NOL8
CENPP
TRUB2
GPRC5A
COQ4
ARID5B
RMND1
ARMT1
FSCN1
ZCCHC4
EIF3F
BMS1
PSMD5
REEP4
FAM72B
SMARCA4
METTL1
EEF1AKMT3
EIF1AD
DPP3
BANF1
SF3A3
SPHK2
RPL18
DDX46
STX6
ZNF507
NDUFAB1
KRT80
DNAJC30
BUD23
PRMT3
RABGAP1L
QRICH1
DHRS3
SERP1
KDM1A
EIF2A
SYNCRIP
BLOC1S4
LTO1
RALGDS
NPEPPS
ATP6V1C1
STAU2
TIMM22
STRA6
HDAC6
MYCL
PUS10
PEX13
BAG6
APOM
ACVR1B
NEXN
METTL2A
PDCD6IP
SART3
RRAGC
ISCU
DGAT2
TMEM18
SBK1
UPK3B
TMEM203
NDOR1
EIF2S1
ATP6V1D
LARP1
SMG8
SCYL3
PRAME
AP2A2
ZGPAT
PPP5D1
NSD1
CALM3
ARFRP1
KMT5B
KDM4C
TTC32
RBM39
TMEM59
TCEANC2
TFAP2C
MAIP1
MAN2C1
MYL12A
TFDP1
HOOK2
ZNF830
CCT6B
CHMP7
STYXL1
MDH2
COX16
UBE2L3
FEM1A
GRHL1
ZNF33B
NDUFB5
MRPL47
HOXC13
PRKCA
LUC7L2
GTF2H4
FOS
CAPRIN2
SFXN1
KLHL12
EIF3H
LRFN4
BRPF1
PSMG2
CEP76
MAN2A2
KDSR
PEAK1
HMG20A
NFU1
KDM7A
NUF2
CENPBD1
NAPA
METTL2B
NSF
BNIP1
RNASEK
LRRC23
SAP30
NVL
BACH2
FLYWCH1
TM2D2
ADAM9
HSPA9
CBX7
ATP6V1H
RPS11
FBXL3
DIP2A
AFF4
INTS1
NOTCH2NLC
MINDY2
DNAJB12
RPS14
JMJD1C
CHD7
CSTF1
AURKA
WWP1
LRRC46
USP28
FASN
UBE2E2
SF3B3
COG4
AIFM1
SLC24A1
CACNA2D2
SPTAN1
HSPBP1
RAB3IP
S100A2
FAM133B
RFX1
VPS52
RPS18
ETV4
SEC13
PLEKHF2
FMC1-LUC7L2
FMC1
COPS7B
RCHY1
GABRR1
GTF2H3
EIF2B1
ABT1
CCDC174
WBP1L
GTF3C5
PRPF6
SYT7
ACTN4
WDR53
TSC1
GFI1B
FBXO45
TTC31
CCDC142
BRIX1
RBPJ
DTNB
XAB2
PHB2
PHF21A
GFM2
CFAP206
KMT2D
SSNA1
ANAPC2
URM1
CUTC
COX15
SNX16
PRR3
GNL1
C17orf58
MB
UTP3
RPL5
PRKCE
ZNF609
MSS51
MRPL1
COASY
ZNF17
ZNF3
RWDD1
FAM162A
COMMD2
CCDC58
ATG101
FCHSD2
PTK2
BIRC2
PATZ1
C1QTNF1
RPL23A
MAP3K1
MARCHF2
CCAR2
IKZF2
PHIP
FAM98B
COMMD4
TBL3
GCN1
ZC3HC1
TIMM50
MINK1
IFT140
CRAMP1
TMEM242
NDUFA9
AKAP3
IGF1R
REXO4
OXNAD1
DPH3
KAT6A
PTPN12
LRRC47
GOLGA3
PES1
RBKS
BABAM2
MED23
RCE1
EIF4A2
ZMPSTE24
EXOSC5
BCKDHA
LASP1
LAMTOR1
CNPY2
UBXN2A
PXT1
KCTD20
GOSR2
TAOK1
NFASC
KLHL32
CHD1
NDUFB3
FAM126B
CD55
CCNI
BSG
PSMA1
FZR1
MAPKAPK5
PNO1
USF2
CSTF2
TARS2
TMEM167B
PRSS22
GTF2IRD2
UPF1
CRKL
ATXN7L3
TCERG1
DIABLO
ERGIC2
CHIC2
TAGLN2
RPS9
SCAF11
MED1
EIF4H
COLEC11
OPA1
TMEM41A
CHRM3
PMPCB
OAZ1
ADCY9
ZNF292
PKP2
PTPRG
LYPLAL1
CMIP
TEFM
OBSL1
IRF2BP2
INHA
SPRTN
EXOC8
REXO1
ELAPOR2
VGLL4
PPP2R5A
KMT5C
LCOR
EFNA3
ALKBH3
BHLHB9
SLX4IP
MTIF2
COLEC12
SGO1
PPP1R37
KLHL22
NOTCH2NLB
NOTCH2NLA
MAGOH
LYPLA1
CFAP36
CABIN1
SEMA5B
ERCC6L2
MELK
EVPLL
ZBTB14
TM9SF4
ARMC8
ZNF217
CCDC88A
VILL
SRSF11
TXNL4B
DHX38
AUTS2
RBM14-RBM4
RBM14
PVALEF
AATK
ALG14
C12orf66
SYT12
MED20
BYSL
TIMM23B
PARG
ORAI3
MAZ
HEMK1
GTF2A1
GFER
NCAPH2
LMF2
AMOTL1
GAB2
GSDMD
RPL7L1
RPS12
IQCG
CHEK1
COMMD8
NFE2
MCM7
MAST2
AP4M1
MRFAP1
DOHH
GNB1
SRSF6
SGTA
PKNOX1
PEPD
SREK1IP1
RYK
CWC27
ELP5
CTDNEP1
SEC61B
PDE12
CTBP1
YTHDF2
STAT5B
LIFR
PTBP3
MRPL27
EME1
MRPS33
MLLT10
SPPL3
C19orf48