ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976675 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◣ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MRPL11
GRB7
MTRNR2L8
SLC45A4
TMEM199
POLDIP2
MTRNR2L2
SFSWAP
ERAL1
STARD3
RBBP8NL
C8orf33
UBE3B
KCTD10
CRBN
TOMM22
NAGPA
VIRMA
STAT6
TSR3
GNPTG
RBM48
PEX1
GRHL2
SALL4
C1orf174
BHLHE40
TRIB1
SLC35B1
PSMD3
FLOT1
PSMB7
IDH3B
MIEN1
POLR3F
DZANK1
MOCS3
DPM1
MRPL45
RGPD2
RGPD1
LAMP1
PHAX
SUPT6H
SDF2
ATP5MF-PTCD1
ATP5MF
PFKM
SENP1
YAP1
FLOT2
EIF5A2
SPNS1
EIF2D
NEURL2
CTSA
SOCS2
MTRNR2L9
POLR2J3
DNAJC11
THAP7
UNC13D
KAT8
GATB
TET3
SAP30BP
RECQL5
TRMT1
RTF2
PLAGL1
SEMA3B
PSMD1
MTBP
MRPL13
METTL25
CCDC59
GPRC5A
TFPT
PRPF31
FAM98B
HES1
SUMF1
CDKAL1
MRTO4
EMC1
VAC14
LZTR1
ZNF335
SUPV3L1
ZZZ3
SKIL
POLR2J
CLPTM1
CENPBD1
HAGH
FAHD1
SLPI
LANCL2
COASY
ZBTB45
SLC25A45
AAAS
SYT12
ZNF383
ATG14
ISY1-RAB43
ISY1
SLIRP
ALKBH1
EPS8
UBE2I
RPTOR
ABT1
HEXA
FAIM
LTO1
DMAC2
SRI
SMG7
SUPT7L
SLC4A1AP
PGAP3
ERBB2
DDX41
REEP4
NGDN
ACP3
RBBP5
SART3
ISCU
SEPTIN9
GET3
NUP214
TRMO
C16orf91
CHRM3
ZFYVE26
LAMA3
TXN2
ATF3
SLC25A53
BIRC2
TGFA
GOLM2
AXL
NDUFA2
IK
PRPF6
TMEM41A
KRR1
TRAF4
SLX4IP
ELP5
CTDNEP1
RAD51AP1
C12orf4
ZNF408
ARHGAP1
FEM1A
STX6
RPS16
SMN2
SMN1
RRP15
LSG1
UPK3B
E2F4
TRIQK
LIMA1
LRRC23
NCAPH2
LMF2
RPS26
PDAP1
BUD31
ZCCHC4
DGAT2
DHRS13
RAE1
KMT5B
MTA3
KCNG3
RCOR3
GTSF1L
TOP3A
SMCR8
ATAD2
LRRC46
ZSCAN25
VPS50
HEPACAM2
U2SURP
GFM1
CACTIN
SERP1
EIF2A
ZNF576
IRGQ
SUPT4H1
MRPS7
GGA3
TSN
MAIP1
MRPL1
NFKBIZ
MRPS15
TMEM203
NDOR1
GCN1
BLOC1S1
UBE2L3
FAM83A
FAM133B
DDIT3
RTEL1
SEMA5B
TRABD
SMIM6
WASHC5
NSMCE2
TAS1R1
NOL9
ZDHHC6
VTI1A
PHB2
UQCC1
POLR2J2
ZSCAN22
NCBP2AS2
NCBP2
NVL
TSFM
LRRC47
MAPKAPK5
STX16
HABP2
RASSF6
BIRC3
TIMM23
ATF6
KCTD5
PLEC
NUDT5
CDC123
ANTKMT
NDUFA9
AKAP3
KLK6
PNMT
C5orf51
SSNA1
ANAPC2
RRNAD1
ISG20L2
LCN2
CCNT1
EIF3F
FOS
TIGD5
EEF1D
HUS1
HSPBP1
TIMM23B
PARG
NUP155
SMG8
INTS1
PRSS22
REXO1
TMEM248
UPK3BL1
RAB3IP
MAGOH
GRWD1
MYNN
CTNNA1
PAXBP1
RPS14
GSDMD
DNAJC30
BUD23
ORAI3
PPARD
LRCH4
FBXO24
DPH7
KRT80
TTC32
TIMM50
KMT2A
ARL14EPL
LRRC29
GABRR1
PKP2
LRP6
ZNF2
DDX46
DNAJB12
SEC13
MINK1
HNMT
SPINT2
ALKBH3
ECH1
TRMT2A
RANBP1
DOK7
DNAH5
CCDC124
CPSF1
GJB5
TBRG4
PUS10
PEX13
PDCD6IP
GTF3C5
MRPL53
ING4
DPP3
BRPF1
PMPCB
EFCAB14
CCDC97
TEFM
EFR3A
SPTLC1
YJU2
MAP3K7
ZGPAT
ARFRP1
FANCD2
ZNF497
PEPD
POMZP3
GRK7
LSM14B
CASC3
COPS7B
NUS1
SLC31A1
FKBP15
UBQLN1
RPS9
SNRPC
HAX1
LIN52
ALDH6A1
NAALADL2
PSME3
DHRS3
KPTN
TRRAP
CLCN7
NOTCH2NLC
VPS52
RPS18
PRR3
GNL1
NOTCH2NLB
NOTCH2NLA
ZNF17
GTF2H4
MRPL27
EME1
NDRG1
CDK12
MAN2C1
ENO3
COA8
BAG5
KAT5
SPHK2
RPL18
TTC31
CCDC142
SOD2
WTAP
USP30
RPL7L1
MCM7
AP4M1
MCCC1
TBC1D23
OAZ3
CDC23
SERPINE1
MTIF2
MAF1
TMA16
COQ5
KRT13
GOSR2
TAGLN2
C12orf73
SH2D4A
VWA7
TMEM18
PSMG2
CEP76
WDR72
CCT8
BBS10
AURKAIP1
TRIP4
PPWD1
CENPK
METTL2A
GFM2
TXNL4B
DHX38
GINS1
RABL2A
NOL8
CENPP
SREK1IP1
CWC27
SYT1
STAM2
SNRNP200
LRFN4
FAM162A
CCDC58
DDX56
PSMD12
ATP6V1G1
METTL2B
XAB2
GTF2IRD2
TMEM123
ZMAT2
PSMB2
ERP27
POU5F1
RFC4
GPR39
METTL17
DDX23
LARP1
MED20
BYSL
MRPS35
FBXL18
ZNF165
MED1
SPDYE14
SPDYE10P
CASTOR2
SLC33A1
FSCN1
HSPA9
KMT2D
PLXNB2
RNF223
AMDHD2
VPS11
BRIX1
RPL37
PIGO
SENP2
VARS1
NME1
NFKBIA
CCAR2
TOMM40
IFTAP
SNRPE
MRPS11
MRPL46
COX16
COMMD2
CRKL
LGALS8
FCF1
AREL1
MRPL38
PLPP2
TACO1
GOLGA3
PRR15
NAPA
MB
LEKR1
RAD52
TRIM56
PIK3C2B
BCL3
SNIP1
TOMM70
LNP1
TMEM120A
EIF2S1
ATP6V1D
SKIDA1
ALDOA
MAP2K3
ETV4
ANAPC5
CTDSP2
SCAF11
GLCCI1
SSBP1
NUDCD3
HR
MUL1
CLDN22
FMN1
TFAP2C
ATP6V1H
HEMK1
LEO1
ZKSCAN2
UBE2Q1
NUP107
PDE4DIP
GTF2H3
EIF2B1
IPO11
FOXK1
NDUFAB1
KLHL32
TM9SF4
CEP63
ANAPC13
TRIM29
NDUFAF4
STK19
DXO
SNRPD2
QPCTL
PROCA1
GGCX
URM1
PRPF8
ARHGAP32
PHF5A
ACO2
TIMM9
KIAA0586
MRPL4
RCE1
PDRG1
COQ8B
MPHOSPH10
MCEE
IBA57
ABCB8
ZNF805
TWF1
RBM39
WDR53
FBXO45
REXO4
EMC4
ARFGEF2
ADPGK
ORC4
MBD5
POP7
XRCC6
DESI1
PHF3
POLE3
C9orf43
JRK
CCZ1B
DDX49
COPE
ARF3
COIL
FNTB
OGG1
CLCF1
RWDD1
NDUFS3
KBTBD4
TNFAIP1
IFT20
NSFL1C
TJP2
MRPS33
HACD2
TBCK
AIMP1
SLC7A6OS
PRMT7
ALG10
GOSR1
ZSCAN21
LMAN2
TPGS1
RPS27A
CLHC1
RECQL4
LRRC14
PES1
SART1
CDK5RAP2
ZNF623
FGD3
MUC20
NOP16
HIGD2A
KAT6A
TPD52L2
TMPRSS4
EVPLL
PRKG2
TINAGL1
TMEM222
DNAH2
PPP6C
TMEM40
TAF6
CNPY4
PLEKHG6
MRM3
GLOD4
PARL
CEP120
GID8
DIDO1
NUP54
NAMPT
ANKRD36C
KIAA0100
TUBA1C
CSTF1
AURKA
KMT5C
ZNF561
DNTTIP2
C12orf43
SENP5
RNF139
MAPKAPK3
CISH
UNC50
COA5
CTTN
RASEF
MRPS18A
C15orf62
MYORG
MRPL3
NMNAT1
LZIC
ANKRD36
PA2G4
TMED10
BNIP1
ZNF3
NR1H2
LYRM4
FARS2
MBOAT7
LMNA
PRR12
TUBGCP6
STYXL1
MDH2
C6orf89
ATP6V0D1
RPS21
TBCB
POLR2I
GLIS2
NDUFB5
MRPL47
RFFL
COMMD10
FAM222B
TCERG1
PDE12
EXOSC3
ZNF302
MRPS26
IQCG
LZTS2
RPL35A
ASB6
SRRD
HPS4
KCTD11
ZNF629
TMEM234
EIF3I
FADD
ERBB3
ESRP1
METTL1
EEF1AKMT3
ZNF256
LENG8
HIF3A
FAM149B1
ECD
TTI1
RPRD1B
PROSER1
NHLRC3
WASHC2A
C6orf132
ARL17B
ARL17A
RNF224
RHOT2
ZNF668
VGLL4
ZRANB2
ZNF646
SLCO1A2
TBCC
BICRAL
BBS1
RNF39
UPP1
DENND2D
RPS29
SNRPD3
GUCD1
LRR1
RASA3
ARNTL
SUGCT
MPLKIP
OPA1
SCARB1
EBPL
LAPTM5
ZNF524
FIZ1
COMMD5
ZFP62
KLHDC7A
TRMT61A
ZKSCAN4
NR2F6
TSPYL4
DSE
RNF168
ANAPC7
IARS1
PPAN-P2RY11
PPAN
ZNF543
ALDH18A1
HNRNPA2B1
CBX3
SLC39A10
GET4
WDTC1
AP5Z1
EPC2
DDX17
EIF4G2
STRBP
NUDT3
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASF2
WASHC2C
GPR137
CDK4
BAD
GSK3B
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
DAGLA
MDM2
FAM72D
FAM72C
CUTA
RPUSD4
FAM118B
SMARCD2
USP49
DDX42
CCDC47
SRSF1
TBL1X
ILF3
MTHFR
CLCN6
SERPINI1
PDCD10
COMMD9
GBA
MAN1B1
VPS33A
SLC35A5
ATG3
OSGEP
APEX1
UVRAG
FANCA
MCOLN1
RAD9A
XPO7
WDR74
CLN3
HPS5
GTF2H1
INO80C
FAM72A
CEP162
MFSD1
PPP6R1
DVL2
SLC4A2
WWOX
PMS1
ORMDL1
CCDC200
NDUFA4
SLC25A11
RNF167
PCIF1
UBE2B
CDKL3
PIP4P1
INTS10
GP1BB
E2F6
WBP2
MEMO1
UBE3C
MOB1B
MEF2C
KANSL3
PTBP1
TNC
HNRNPH2
GLA
ITGB3BP
EFCAB7
KCNMA1
UBAP2L
C1orf43
PASD1
WDR62
THAP8
TPP1
SUMO3
SH3GL1
THRAP3
GPATCH3
CLSTN1
ST7
DHX35
ANKS6
ELP3
HM13
SPATC1L
DAZAP1
NDUFS7
MIER1
SUSD4
XRCC5
TBC1D30
GNS
SLK
ADGRB3
DENR
LPCAT3
FGGY
TMEM116
ERP29
ADGRL1
ALG6
SHLD2
GLUD1
SUMO2
SCAMP5
DICER1
ADAM23
DUSP6
BAX
OTUD7A
TNPO3
KDM3A
RXRA
SH2B1
TRUB2
COQ4
ARID5B
RMND1
ARMT1
BMS1
PSMD5
FAM72B
SMARCA4
EIF1AD
BANF1
SF3A3
ZNF507
PRMT3
RABGAP1L
QRICH1
KDM1A
SYNCRIP
BLOC1S4
RALGDS
NPEPPS
ATP6V1C1
STAU2
TIMM22
STRA6
HDAC6
MYCL
BAG6
APOM
ACVR1B
NEXN
RRAGC
SBK1
SCYL3
PRAME
AP2A2
PPP5D1
NSD1
CALM3
KDM4C
TMEM59
TCEANC2
MYL12A
TFDP1
HOOK2
ZNF830
CCT6B
CHMP7
GRHL1
ZNF33B
HOXC13
PRKCA
LUC7L2
CAPRIN2
SFXN1
KLHL12
EIF3H
MAN2A2
KDSR
PEAK1
HMG20A
NFU1
KDM7A
NUF2
NSF
RNASEK
SAP30
BACH2
FLYWCH1
TM2D2
ADAM9
CBX7
RPS11
FBXL3
DIP2A
AFF4
MINDY2
JMJD1C
CHD7
WWP1
USP28
FASN
UBE2E2
SF3B3
COG4
AIFM1
SLC24A1
CACNA2D2
SPTAN1
S100A2
RFX1
PLEKHF2
FMC1-LUC7L2
FMC1
RCHY1
CCDC174
WBP1L
SYT7
ACTN4
TSC1
GFI1B
RBPJ
DTNB
PHF21A
CFAP206
CUTC
COX15
SNX16
C17orf58
UTP3
RPL5
PRKCE
ZNF609