ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976677 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◣ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

GRB7
MRPL11
MTRNR2L8
SLC45A4
MTRNR2L2
ERAL1
TMEM199
POLDIP2
RBBP8NL
GRHL2
SFSWAP
NAGPA
RBM48
PEX1
C1orf174
SLC35B1
C8orf33
ISY1-RAB43
ISY1
MTBP
MRPL13
MRPL45
CRBN
STARD3
TOMM22
GOLM2
PSMD3
UNC13D
PGAP3
ERBB2
ZDHHC6
VTI1A
STX16
IDH3B
MIEN1
VPS50
HEPACAM2
SUPT7L
SLC4A1AP
RPTOR
SMN2
SMN1
SKIL
SALL4
PSMB7
GPATCH3
FLOT2
HES1
SUPT6H
SDF2
PLD1
UBE3B
KCTD10
TET3
CDKAL1
POLR2J3
FLOT1
EIF2D
POLR2J
RBBP5
RGPD2
RGPD1
TRIB1
POLR3F
DZANK1
BHLHE40
MTRNR2L9
LAMP1
SLC25A45
EIF5A2
TSR3
GNPTG
GATB
ZZZ3
SNRPE
RAD51AP1
C12orf4
TAS1R1
NOL9
TRMT2A
RANBP1
PLAGL1
NDUFAB1
SOCS2
NGDN
YAP1
KMT5B
ABCB8
ATF3
MRTO4
EMC1
SAP30BP
RECQL5
GET3
THAP7
SPHK2
RPL18
WASHC5
NSMCE2
PFKM
SENP1
CLPTM1
U2SURP
DHRS3
HAGH
FAHD1
EIF3F
DNAJC30
BUD23
MOCS3
DPM1
DMAC2
WDR53
FBXO45
PKP2
COLEC12
POLR2J2
TIMM23
ZNF335
METTL25
CCDC59
TSFM
TJP2
TFAP2C
SLC25A53
BIRC3
EIF3H
ZNF830
CCT6B
LANCL2
SEMA5B
RTF2
HEXA
DDX41
STX6
ZSCAN22
TSN
URM1
OPA1
ERP27
SPNS1
ZNF383
C16orf91
FAIM
OAZ3
RPS26
SEPTIN9
DUS2
DDX28
EMC4
PES1
REXO1
TOP3A
SMCR8
ZNF165
NEURL2
CTSA
ZSCAN25
TRAF4
TMEM203
NDOR1
GSDMD
ELP5
CTDNEP1
KMT2D
REEP4
TBRG4
AXL
FAM83A
NUP107
ITGB3BP
EFCAB7
GTF2H3
EIF2B1
EVPLL
SYNCRIP
BRPF1
JRK
HR
COMT
DUSP6
COPZ1
ATP6V1G1
ATP5MF-PTCD1
ATP5MF
ZBTB45
ATG14
NME1
KRT80
STAT6
SEMA3B
LAMA3
SMG8
RAB3IP
NRDE2
LZTR1
SF3B3
COG4
EIF4A2
GOLGA3
TIMM21
FBXO15
SRI
LTO1
UBC
SREK1IP1
CWC27
HUS1
GTF3C5
BRIX1
KIFC2
CYHR1
ELAPOR2
COPS3
DPP3
FAM162A
CCDC58
NOL12
TFPT
PRPF31
CCNT1
NOP16
HIGD2A
METTL1
EEF1AKMT3
NDUFA9
AKAP3
RNF39
TRMT1
KAT8
SYT1
NFKBIA
HSPBP1
HACD2
CHRM3
TIMM23B
PARG
MRPS7
GGA3
ELP3
RTEL1
LSG1
NPAS2
NUDCD3
ZGPAT
ARFRP1
NDUFB3
FAM126B
COLEC11
GABRR1
OXNAD1
DPH3
VPS33A
CCDC174
EFR3A
ZNF260
SART3
ISCU
SLC24A1
GPRC5A
LRRC23
PRR15
TCERG1
SUMF1
METTL2A
APOBEC3H
TXN2
RWDD1
PPWD1
CENPK
ALDH3B2
IFI16
MTA3
KCNG3
PDAP1
BUD31
CDK12
DCTN6
DDX46
ABT1
METTL2B
EXOSC5
BCKDHA
SLX4IP
IPO11
RNF40
CCDC189
NUP214
EIF1AD
BANF1
GINS1
ATP5MG
RTN4IP1
QRSL1
SUPT4H1
MAP3K7
UPK3B
TRMO
COPS7B
C5orf51
PAXBP1
GFM1
XAB2
FEM1A
INTS1
CCDC97
SLIRP
ALKBH1
TTC31
CCDC142
PHB2
CD55
TRIAP1
ZNF408
ARHGAP1
ATAD2
VAC14
NDUFS3
KBTBD4
TRIM6-TRIM34
TRIM6
MRPS11
MRPL46
GLCCI1
NDUFA2
IK
ZNF2
DNAH5
TSC1
GFI1B
FAM98B
TBL3
HABP2
LTBR
CACTIN
NCAPH2
LMF2
GUCA2A
FASTK
DNAJC11
LRRC29
FOS
MB
ZBTB20
NPAS3
MRPS15
CENPBD1
MRPS33
TAF2
TRIP4
VGLL4
MED1
TBCK
AIMP1
KRR1
PDCD6IP
TAGLN2
AAR2
FBXO11
ATF6
DDIT3
ENO3
PSME3
RXRA
PRPF6
MINK1
PRKG2
POU5F1
DOK7
SERP1
EIF2A
MAPKAPK5
BRF2
ASH2L
LMAN2
BMS1
GRK7
PTMS
DNAJC19
PAN2
BNIP1
TRIM29
GTF2H4
BCL3
HCAR2
MCC
NDUFB5
MRPL47
TARS2
ALG10
MUC20
TMX2
MED19
SUPV3L1
STYXL1
MDH2
ZNF17
INO80D
NDRG1
TARBP2
FSCN1
NVL
LMNA
ANXA3
METTL6
EAF1
MAN2C1
NUP54
ZFAT
HERC5
DOHH
MED4
EPS8
DDX23
RPS11
USP30
UBQLN1
AAAS
NCBP2AS2
NCBP2
DHRS13
WDR72
ICE1
WDR75
ZKSCAN4
PIKFYVE
KDM3A
PTK2
TMEM242
MCM7
AP4M1
MED18
TLE3
ZRANB2
PSMB6
ANKRD22
EPN3
RPL26L1
MRPS35
ARL14EPL
GOSR1
PRKAR1A
ARL1
KIAA1217
PHAX
ZNF497
LZTS2
SEMA3E
CEP162
ZC3HC1
MRPL21
IGHMBP2
CWC25
RASEF
SENP2
BAG6
APOM
KAT6A
PHF12
WDR83OS
WDR83
SLC52A3
CNPY2
VILL
SLC9A1
LYRM4
FARS2
SLC26A11
STAM
ORMDL3
UBE2L3
RPS14
PPIH
VPS52
RPS18
COPS4
DLC1
NAMPT
RAE1
DIABLO
TNFAIP1
IFT20
PSMD12
LCMT2
ADAL
EXD2
SNRPC
GGA1
KAT5
SEC13
MAPKAPK3
CISH
SMG5
MAP2K3
TNRC18
AP5Z1
ZMPSTE24
RBM42
MBD6
PUF60
GPBP1
MDGA1
SDHC
WASHC2A
BLOC1S1
ZNF3
PNO1
TINAGL1
C12orf43
XPNPEP3
ST13
LIMA1
RPL23A
MRPL40
HIRA
UBOX5
FASTKD5
DSTYK
METTL3
SPTLC1
PSMD1
MYL12A
MED23
RPL7L1
RPS21
PSMD6
TRMT61B
NSFL1C
C19orf48
RBX1
HIRIP3
RAB24
PRELID1
TSR2
SSNA1
ANAPC2
RPS12
PIK3C2B
WDR24
PROSER1
NHLRC3
EIF3E
DOLPP1
DGAT2
REXO4
OBSL1
INHA
ZNF256
FUT1
MRM3
GLOD4
SMG7
KMT2A
LONP1
CATSPERD
NDUFA10
ALDOA
ID1
MRPS10
MAGEA2B
MAGEA2
POLD4
CCAR2
TRIQK
TMEM41A
BCL9
TEFM
CDC23
PLEKHG6
XDH
TGFB1
RPL13A
NUFIP1
GPALPP1
PNKD
POLE3
C9orf43
ZFPL1
CDCA5
TMEM40
TMEM69
DGCR6L
SLCO1A2
FGR
NPIPB11
GCN1
SYT12
RBM19
BBS1
PALB2
DCTN5
KRT17
SRRT
TSR1
RPUSD4
FAM118B
EIF2S1
ATP6V1D
MCCC1
LEO1
EFCAB14
KRT8
KRT18
JADE2
TFIP11
VIRMA
ATG101
PEPD
TXN
FBXW2
TP53I3
SSBP1
LRRC47
RCE1
TPD52L2
CCDC12
TTPAL
ERCC6L2
TXNL4B
DHX38
CEP63
ANAPC13
PLEC
RFFL
MRPL58
FAF2
LRFN4
C2CD5
C12orf73
RAD52
NFKBIZ
TMPRSS4
CCDC77
RPLP2
KDM5A
CXXC4
TIMM22
PRSS22
MED6
ADPGK
MRPS21
SAMD4B
TNPO3
ZCCHC4
TTC32
KLK6
TBC1D17
AKT1S1
HAX1
RPS16
ZCCHC3
COMMD5
FGD3
MTERF4
ZNF34
ECH1
FOCAD
UPK3BL2
SRRD
HPS4
CHN2
SECISBP2
CENPW
CPVL
SRRM3
FAM133B
PHF3
COPS8
SLC9A8
DHX16
VPS37A
CNOT7
LAPTM5
TMEM68
TGS1
DNAJB12
ERGIC2
ZFP64
GPN1
CCDC121
MRPS18A
MANBAL
ZNF503
ZNF205
RPS9
UPK3BL1
PEX26
CIAO3
KIAA0100
MCF2L
SCAF11
MED20
BYSL
MAF1
SCARB1
HTRA2
DDX56
DDX19A
SMARCAD1
ZNF696
COX16
PSMG2
CEP76
ACAD9
TGFBR2
RPSA
ZNF76
SMARCE1
CLASRP
RILPL1
PMPCB
FAM110A
ZNF384
MYNN
PEMT
LPCAT3
PFDN4
TAF6
CNPY4
XPC
LSM3
NEMF
C2orf49
RPS20
ZNF623
TMCO6
ZNF576
IRGQ
ZNF524
FIZ1
BORCS7
PCBP2
RPL26
GSTP1
WASHC1
ETV4
ZNF561
HNRNPH1
RPL23
BMF
MRPL12
EXOC5
AP5M1
ZNF250
NDUFS7
TPGS1
CIPC
MC1R
CASC3
RPL21
KCTD11
MIDEAS
ZC3H10
PPFIA1
SUPT16H
BOD1
LRP1
VASP
CYP1B1
RRP7A
FRMPD2
DHX35
SUGCT
MPLKIP
MTIF2
ALG14
LCN2
GABPB1
GABARAPL1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
GPANK1
CSNK2B
ZNF668
CBLL1
ZCWPW1
MEPCE
CCZ1B
SRP68
ZNF646
TIMM50
MAGOH
EFTUD2
CCDC103
SSBP2
GID4
ATPAF2
POMP
ZNF507
PPP1R37
MDH1B
FASTKD2
GJB5
TRIP6
TAF9
RAD17
AK6
NUF2
SLC35A4
APBB3
RNF19A
TTC6
FOXA1
RNF223
ORAI3
SNRPD3
GUCD1
TNFRSF12A
PPIL3
NIF3L1
IVNS1ABP
GUSB
COMMD1
CCT4
ZNF770
VWA7
SH2B1
NAPA
LGALS8
UMAD1
PNMT
WDR36
ERCC5
COPB2
FMN1
ATP5MPL
RP1L1
SAR1B
TMEM18
CSTF1
AURKA
CRKL
ZNF16
MFN2
ZKSCAN5
PLEKHG1
PPP6R1
PSMC3
WBP4
ELF1
STON2
DUT
AMDHD2
POR
MRPS22
MAGOHB
TFB2M
CNST
YJU2
GTF2IRD2
LENG8
ARMC1
DNMT1
XRN2
RBM28
GTF2H2
SYS1
POC1B-GALNT4
POC1B
DTNBP1
UPP1
SKIDA1
LEKR1
SDHD
GTF3C3
FOXS1
ATXN7L1
NOTCH2NLC
NOTCH2
LRPPRC
ZMYND8
PPFIBP2
ARHGEF35
SLC25A11
RNF167
SLPI
ACP3
RPS7
ATR
SRP9
LRATD2
C18orf21
RABL2B
PPP1R1B
KPNA6
TGFA
FBXL19
HEMK1
SEC61B
GSN
PTP4A1
SNRNP200
MAD1L1
PRKAB2
CHD1L
RABL2A
SDCBP2
ZNF460
P3H4
FKBP10
TLCD1
CAPN10
GPR39
EIF4G1
TIPARP
SRSF11
LRRC40
BCL6
WDR11
PIGU
E2F6
GFM2
FBXL18
COQ8B
SH2D4A
PLXNB2
PUS10
PEX13
GRWD1
UNC50
COA5
HSPA9
UTP3
ZFP62
BDP1
SPCS1
GLT8D1
RBM39
PTPN12
SERPINE1
ATP2C1
ORC4
MBD5
PIP4P2
S100A2
RBM14-RBM4
RBM14
TM4SF4
ZNF551
PSMD5
NR1H2
GPX1
CLSTN1
FAM222B
TMEM101
MAGEA6
CYBA
CUL9
NUP93
SETDB1
LNPEP
PLPP2
SPRY4
RAB5IF
ZC3H3
OTUB1
COMMD2
RNF187
DNAJA3
TMEM123
RASSF6
TRIM35
PTK2B
ANKRD46
CSF2
TBCB
POLR2I
ZBTB4
POLR2A
LAT2
DLST
KLHL12
FOXA2
DPH5
TBC1D1
MRPL28
TBCC
BICRAL
ZNF511
TUBGCP2
TCHP
ZSWIM6
TM9SF4
GTPBP4
TRIM4
ZKSCAN2
RNF224
CCDC38
AMDHD1
TOMM40
GTF2H2C_2
GTF2H2C
BIRC2
STAM2
PWP1
GALK2
COPS2
TMEM183A
ZNF7