ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5457145 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◣ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

ALDH18A1
SLC39A10
WDTC1
DDX17
EPC2
HNRNPA2B1
CBX3
EIF4G2
GABARAP
STRBP
SEPTIN7
SLC25A25
NAIF1
WASF2
NUDT3
GPR137
BAD
DAGLA
RSF1
AAMDC
GSK3B
MSMO1
RPGRIP1L
FTO
FAM72D
FAM72C
DDX42
CCDC47
USP49
FANCA
SMARCD2
SERPINI1
PDCD10
XPO7
SRSF1
MAN1B1
FAM72A
MDM2
PMS1
ORMDL1
MOB1B
AURKAIP1
DICER1
WWOX
HDAC6
MAP3K1
FAM72B
ADGRL1
MEMO1
NEXN
MARCHF2
KLHL22
BACH2
DENR
PRAME
ZNF33B
INTS10
RFX1
INO80C
PPP6R1
C21orf58
GP1BB
WBP2
KANSL3
GYPB
XRCC5
CSTF2
E2F6
CAPRIN2
NFE2
RBM39
CFAP36
MAN2A2
NFU1
TMEM87B
CASS4
ZNF497
ZNF451
VWA7
CDK12
P2RX6
TCP11L2
WDR74
POLR2J3
SYT7
RCHY1
NUP214
PSMD5
H4C4
TRUB2
COQ4
TJP3
DNAJB2
YJU2
TMEM59
TCEANC2
ZNF609
TRIM37
TRMT10A
MTTP
AIFM1
SIRT1
KIAA1586
FKBP8
RIPOR3
RPS11
SUPT7L
SLC4A1AP
CMIP
KAT5
WDR89
NCAPD2
MRPL51
CEP43
PRDX1
NXT2
PAXBP1
CASC3
ERCC6L2
FUT10
BRD7
PPIL2
NOP16
HIGD2A
CRB1
RBBP5
ANKFY1
ZNF165
VILL
UFD1
CDC45
ERMAP
KDSR
EML2
FOXJ1
CRKL
PRPF38A
ORC1
CTBS
NME1
TUBGCP5
LYL1
THAP7
SCN9A
RAB33B
CENPF
COQ10B
ZNF335
SPATC1L
GNB2
IL1R1
GTF3C2
ZNF408
ARHGAP1
LZTR1
PDE4C
REXO4
SLFN14
BTBD10
NUF2
OBSL1
INHA
SDF2L1
FBXW11
STAT6
KLHDC9
TNPO3
ARF3
FABP6
PTMS
COASY
SUPV3L1
ZNF391
RPS26
YIF1B
PPOX
BNIP3L
ZSCAN31
ATAD2
KDM3A
GBA
PCIF1
ILF2
GYPE
DMAP1
TBL1X
MRPL40
HIRA
TOP3B
PLSCR1
TRIM69
HPN
ST6GAL1
ASXL1
FAM83A
RGL2
UBE2L3
TSC1
GFI1B
SAMD4A
AP1G1
BLVRB
GOLGA8B
BAG6
APOM
WASHC2C
NDUFS3
KBTBD4
MBD2
MED15
IQUB
PUS7L
IRAK4
RPL12
LRSAM1
SIRT4
MAPK14
ZZZ3
TUBE1
FAM229B
RRP15
AQP10
NR1H3
ACP2
EPS15
AJUBA
HSP90AB1
SMG7
C3orf86
CA1
YDJC
TFPT
PRPF31
ITGB3BP
EFCAB7
CCNI
ZSCAN30
SLC25A37
MRPL48
PAFAH2
DGCR2
NDUFS7
CCNG2
LUC7L2
ZCCHC24
EGFL7
RPS19
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ASCC1
ANAPC16
TIMM10B
IMPA1
CLTCL1
NDUFA2
IK
SLC35E2A
KLHL20
CDC5L
PLK3
SZT2
MED8
PTCD3
POLR1A
RPA2
MICOS10-NBL1
MICOS10
UTP3
RTBDN
GOLGA3
CALM2
TRIM6-TRIM34
TRIM6
S100A13
CHTOP
ARFGEF2
GABPB2
SSBP1
NUP155
H4C8
TAF10
C1orf159
DDX39B
COPB2
CCNC
ALKBH7
AP1M1
KRR1
DNAJB12
ALG14
RBL1
RPS8
ZBTB45
PMVK
SEC31A
CHCHD2
THAP9
TRAPPC9
LARS2
GET4
CSDE1
PPM1D
SART1
SCAMP3
S100Z
UBE3B
KCTD10
ADARB1
SNRPE
MYL12A
NBEAL2
IGF2BP3
SLC25A11
RNF167
CACTIN
TMEM18
ATXN7L2
CAPS2
MRPS28
SS18
KCNAB2
HERC1
MYBPHL
NDE1
MARF1
METTL25
CCDC59
UBE2I
CCRL2
SPIDR
NCOA4
LENG9
TRIP4
PIH1D2
NKAPD1
C8orf37
PHF19
BCAS2
TAS1R1
NOL9
H4C3
HMX3
IQCB1
EAF2
MRPL45
KDM5C
PRR19
PAFAH1B3
ECE1
CEP85L
UBE2B
CDKL3
JMJD1C
TMEM242
SS18L2
SEC22C
PUF60
NRL
DCAF11
KLLN
GAGE2A
ZNF444
MRPL27
EME1
TOM1L2
DRC3
HMBS
RBM26
ZNF555
ARMC8
TXNDC2
MRPS7
GGA3
MAD1L1
STX5
QRICH1
UBOX5
FASTKD5
KMT5A
HYLS1
ZDHHC6
VTI1A
ATG101
PIK3R3
RNFT1
PPIH
MDM4
PPP4R3A
RBPJ
TRIB1
CSTF2T
TARS1
PRRG2
NOSIP
PITHD1
RCCD1
TMEM167B
TRAPPC4
RPS25
YTHDC1
BSDC1
TTI2
DHPS
AP5Z1
SPNS1
TAOK1
PDE7A
HDAC8
COX7A2L
ARL14EP
ARNT
CFAP298-TCP10L
CFAP298
DDIT4
MDC1
GAL3ST4
CRCP
POLR3F
DZANK1
DMAC2
PSME3
DGCR8
PSMC5
FTSJ3
IREB2
TTC21B
RABEP2
SUPT5H
MRPL39
BPHL
CCDC97
GPATCH3
ZC3HC1
SDE2
GP6
DYNC2I2
RINT1
PPP1R13L
POLR1G
WNK4
ZMPSTE24
RPS7
WDR55
SFSWAP
GTF2H4
CACYBP
SRCAP
LOC730183
SKIV2L
NELFE
CD33
KMT2D
PACSIN2
RPL5
PXT1
KCTD20
WDR83OS
WDR83
THG1L
TIPIN
PDCD2L
FZD1
TPR
ODR4
IFNAR1
ZNF74
JOSD2
GYPA
NCDN
KIAA0319L
SLC27A4
LRRC46
PFDN4
HNRNPH1
PRR5
ATAD3A
H2BC18
PPP4R3B
AHCTF1
SH3BGR
LCA5L
ATP8A1
RHBDD1
WASHC2A
GPBP1L1
RPL10A
SYCP2L
GOLM2
THRAP3
STAT3
MST1
HNRNPH2
GLA
SMG5
FDXACB1
C11orf1
TIMM17A
SRSF7
USP54
NEK2
STRIP1
MYO1C
MORF4L2
PRMT3
USP9X
RPL36
ANXA2
TRMO
EIF2D
RPS9
RBM28
TMEM248
TCTEX1D4
BTBD19
H2AZ2
PARK7
GDAP1
CXXC1
UIMC1
EIF1AD
BANF1
RPL37
XPC
LSM3
SCAND1
LSM2
CAB39
NIP7
COG8
ORAI3
ATR
NHLRC4
PDE4A
SLC25A53
CHD1
SNRPD3
GUCD1
TUT1
NADK
TMEM168
GAS8
RNPEP
VPS33A
MRPL21
IGHMBP2
SHB
ALDH3B1
HSPBP1
MTERF1
SRFBP1
DHDDS
NFYC
PROCA1
DHDH
MYL6
MCOLN1
SLX1B
SLX1A
BOLA2B
BOLA2
RBSN
SETD1A
PAK1IP1
C6orf52
CYTH2
TIMM44
C2orf42
TNFSF9
PTGS1
TIMM23
TTC32
VMAC
NDUFA11
ZCCHC14
ZNF280A
LOC388282
EBNA1BP2
CFAP57
MRPL54
TTC26
FAM200B
NMNAT1
LZIC
POLDIP3
APBA3
PMF1-BGLAP
PMF1
ZNHIT1
PLOD3
HSPA9
AKAP1
DCAF10
ALG1
EXD1
CHP1
RHOT1
SSR4
IDH3G
C5orf51
SH2B1
UQCC2
POTEE
TBRG4
NDUFAB1
PLS1
CTR9
ZNF510
YIPF2
TIMM29
ZNF180
ZYG11B
SLC12A9
SLC2A12
NOP14
GRK4
KLHDC8B
ERAP1
SLC35C2
DDX41
ZNF561
BOLA2-SMG1P6
NBPF1
STXBP4
COX11
DNAJC28
SH3D21
PSMC3
GPBP1
RAB5A
EFHB
SPRING1
RNFT2
POC5
SPAG9
MRPS15
NUP107
LMAN2
BMS1
METTL1
EEF1AKMT3
PEAK1
HMG20A
FMC1-LUC7L2
FMC1
IFT140
CRAMP1
UMAD1
CCNL1
RTL10
GNB1L
RAB11A
RSPH14
METTL2B
COMMD4
SLC35A4
APBB3
CNOT2
THUMPD3
TMEM209
FAM156B
FAM156A
TBX1
MAP10
RAPGEF2
PEX3
ADAT2
SETDB1
NEU1
CLPB
RFC2
PNISR
VAMP5
ABCF1
NME7
BLZF1
CEP162
UTP18
MBTD1
INO80B
H4C11
HIPK3
UBP1
MRPL1
ISG20
RFXANK
BORCS8-MEF2B
BORCS8
AGBL3
NUFIP2
TBC1D15
METAP1D
SLC25A1
CD2BP2
DHX9
LPCAT3
SMG8
S100A2
ELAPOR2
MARCHF7
MAPK1
PTPN4
CPQ
RPS14
TMEM222
ABHD10
SEC24C
KIAA1191
EVI5
TSFM
ZNF576
IRGQ
PDE4DIP
MTIF2
TMCO1
CDIPT
GNAI3
CLP1
ROBO3
PRCP
DDIAS
MTBP
MRPL13
SLC33A1
BLCAP
WDR46
PFDN6
SNX15
MRPL2
KLC4
PDAP1
BUD31
LSG1
WWP1
HSF1
BOP1
NSUN4
ATP5MC1
CLDN12
IFTAP
ZSCAN9
MRPS16
RPS3A
PAGR1
TMED1
SPDL1
PURB
MTMR4
ATAD3B
COG7
CGB2
SLC45A4
ATP6V0D1
NDUFA4
SNRPC
STAM2
TMEM101
EMC2
RNF168
CYB561D1
ARCN1
ZFAND3
VWDE
BRAP
ACAD10
BLOC1S1
CSTF1
AURKA
SEC61B
DUS3L
EXOSC3
C9orf16
TOE1
MUTYH
SLC24A1
PSMA1
PMPCB
RBM42
SLC9A1
NUP205
LRIG2
ZBTB6
AHCYL2
EOLA2
NASP
MPC1
ARL2BP
SF3A3
MED23
GOSR2
EFTUD2
CCDC103
FUS
STK19
DXO
LSR
RPL38
FAM207A
UBXN10
PLA2G2C
SPDYC
ZSCAN25
ADPRS
YIPF3
POLR1C
GSTA4
MTMR14
POLG
WDR73
DDX59
ZNF524
FIZ1
ZCWPW1
MEPCE
SRSF3
SMIM12
GATD3B
GATD3A
RC3H2
FRA10AC1
FAM220A
MGRN1
KIF2C
SUPT3H
SUV39H1
LEMD2
SUPT6H
SDF2
ERGIC2
FAM227B
DTWD1
ABCF3
ARRB2
TIMM10
SPOCD1
PROSER3
NES
ECH1
INKA2
DDX20
ZNF687
GTF2H2C_2
GTF2H2C
CDK16
WFDC3
DNTTIP1
SH2B3
TMEM217
TBC1D22B
SNAP29
PI4KA
FAM86B2
COPS7B
SLC38A8
MRPS17
TAL1
ZNF669
HARS2
HARS1
SARNP
ORMDL2
PDE6D
DGAT2
C17orf75
ZNHIT6
PRTN3
ZNF346
RBM19
H4C14
GNL2
ATF7-NPFF
ATF7
H4C15
TMBIM1
MTX1
DSN1
RAMAC
TSEN2
PPP6R3
THBS3
SH3BGRL3
RAB3GAP1
PRR3
GNL1
CNPY2
YTHDF2
CDK5RAP1
UQCC1
TRIP6
KIFC1
HDAC5
TM2D1
SPATA1
GNG5
PSD4
PPWD1
CENPK
TAF12
SLC36A1
ZNF529
TSR2
IRF9
ISOC2
ZSCAN12
PRXL2B
ZNF619
TRMT2A
RANBP1
MRTO4
EMC1
TRMT1
BNIP1
TEFM
FCF1
AREL1
PPARD
PAF1
MED29
FAM76A
OR4F3
OR4F29
OR4F16
MAP2K2
ZDHHC7
CFAP54
TMEM268
ABCB6
MAGEA3
MRPS33
MTF2
GTF2H2
NKIRAS1
TMEM39B
RNF40
CCDC189
UTP20
AHCYL1
RPL15
SF3B6
FAM228B
RFX5
H4C12
RILP
NFKBIL1
ATP6V1G2
TTC16
PTRH1
USP36
MED16
USP6NL
PRORP
PPP2R3C
TMCC2
CFAP20
FUCA2
DNAJB6
UBE2T
LPCAT4
CARM1
RPL7L1
SPINK4
MAK16
MRPS18C
HELQ
CCT8
DBF4B
GPN3
FAM216A
AARS2
GCK
VANGL1
CNTRL
C5
CLPTM1
RBKS
BABAM2
VPS26C
ZNF397
ETFA
CPPED1
ZNF574
HSDL2
CUL7
LSM10
RPUSD4
FAM118B
NDUFB5
MRPL47
URM1
CEP350
MRPS14
HAUS5
UBLCP1
SETD4
CCDC9