ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976678 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◣ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

GRB7
MRPL11
MTRNR2L8
MTRNR2L2
ERAL1
SLC45A4
RBBP8NL
TMEM199
POLDIP2
SFSWAP
GRHL2
NAGPA
MTBP
MRPL13
SLC35B1
MRPL45
RBM48
PEX1
MTRNR2L9
C1orf174
CRBN
ISY1-RAB43
ISY1
PSMD3
C8orf33
MIEN1
UNC13D
STARD3
POLR2J3
TET3
PGAP3
ERBB2
SMN2
SMN1
VPS50
HEPACAM2
POLR2J
IDH3B
TOMM22
SUPT7L
SLC4A1AP
GOLM2
HES1
CDKAL1
SKIL
GPATCH3
STX16
RPTOR
FLOT2
POLR3F
DZANK1
TRIB1
ZDHHC6
VTI1A
RGPD2
RGPD1
UBE3B
KCTD10
SOCS2
FLOT1
GATB
ZZZ3
EIF2D
SUPT6H
SDF2
PSMB7
SLC25A45
PLD1
ABCB8
LAMP1
PLAGL1
SAP30BP
RECQL5
SALL4
SNRPE
HAGH
FAHD1
RBBP5
SPHK2
RPL18
BIRC3
GET3
TAS1R1
NOL9
ATF3
CLPTM1
GABRR1
WASHC5
NSMCE2
BHLHE40
YAP1
RAD51AP1
C12orf4
TRMT2A
RANBP1
MRTO4
EMC1
TMEM203
NDOR1
EIF3H
NDUFAB1
MOCS3
DPM1
ATP6V1G1
SEMA3B
EIF5A2
ZNF383
U2SURP
KMT5B
DNAJC30
BUD23
EIF3F
THAP7
ERP27
ELP5
CTDNEP1
TSR3
GNPTG
SLC25A53
ATP5MF-PTCD1
ATP5MF
TJP2
OAZ3
FAIM
SF3B3
COG4
FAM83A
TFAP2C
RTF2
REEP4
PFKM
SENP1
DDX41
RPS26
TRAF4
PKP2
JRK
TSN
ZNF830
CCT6B
DUS2
DDX28
NGDN
POLR2J2
RAB3IP
GPRC5A
LANCL2
TIMM23
COLEC12
PDAP1
BUD31
WDR53
FBXO45
ZNF335
DHRS3
OPA1
CHRM3
HEXA
HUS1
NFKBIA
EMC4
SPNS1
AXL
C16orf91
COMT
SEPTIN9
DMAC2
ZNF165
NME1
ZSCAN22
STX6
METTL25
CCDC59
TSFM
RNF39
KAT8
ZGPAT
ARFRP1
NEURL2
CTSA
PES1
MAP3K7
LTO1
BRPF1
C5orf51
MRPS7
GGA3
VAC14
RTEL1
SYT1
FAM162A
CCDC58
LRRC23
TOP3A
SMCR8
KMT2D
EFR3A
ELP3
OXNAD1
DPH3
SUMF1
REXO1
TIMM21
FBXO15
TFPT
PRPF31
ITGB3BP
EFCAB7
CCDC97
HACD2
SMG8
STAT6
KRT80
LTBR
FOS
TBRG4
GTF2H3
EIF2B1
GOLGA3
MTA3
KCNG3
NRDE2
ABT1
TRMT1
SLIRP
ALKBH1
INTS1
TIMM23B
PARG
EPS8
LSG1
FAM98B
RPS11
GSDMD
SART3
ISCU
SLX4IP
TRIAP1
ZNF2
MRPS11
MRPL46
NOL12
LZTR1
NUP107
AAAS
HR
SRI
DPP3
ZSCAN25
LMAN2
GUCA2A
EVPLL
SYNCRIP
MB
NPAS3
ZBTB45
CCNT1
URM1
SEMA5B
BRF2
DDX23
MRPS35
SUPT4H1
TCERG1
ENO3
ATG14
UPK3B
CENPBD1
CCDC174
TTC31
CCDC142
EIF4A2
KIFC2
CYHR1
NPAS2
TAF2
RTN4IP1
QRSL1
METTL1
EEF1AKMT3
NVL
EXOSC5
BCKDHA
MED1
ALDH3B2
DOK7
ATF6
METTL2B
BNIP1
BRIX1
DCTN6
DUSP6
ZRANB2
RWDD1
CACTIN
NOP16
HIGD2A
SSNA1
ANAPC2
PHAX
INO80D
GTF3C5
TBL3
NCAPH2
LMF2
DDX46
NDUFA9
AKAP3
NDUFB3
FAM126B
SREK1IP1
CWC27
LAMA3
TRMO
PAXBP1
KRR1
COLEC11
MRPS33
RNF40
CCDC189
METTL2A
TSC1
GFI1B
POU5F1
ZCCHC4
MAPKAPK3
CISH
ZNF256
ZNF408
ARHGAP1
RXRA
CD55
NUP214
PTK2
GINS1
ATP5MG
BMS1
FEM1A
GFM1
SLC24A1
DIABLO
PNKD
AAR2
APOBEC3H
PRR15
DNAJC11
TXN2
SERP1
EIF2A
STYXL1
MDH2
COPS7B
ZMPSTE24
RPS21
BCL3
FOCAD
MNAT1
PLEKHG6
COPS3
AP5Z1
SUPV3L1
PRPF6
ALG1L
BLOC1S1
CDK12
PPWD1
CENPK
MINK1
MAPKAPK5
VPS33A
CNPY2
MRPS15
ASH2L
DDIT3
ZBTB20
NDUFA2
IK
XAB2
BCL9
LMNA
PAN2
USP30
NDUFB5
MRPL47
NDRG1
PRKG2
TRIM29
SLC26A11
NUDCD3
UBE2L3
DNAJC19
NSFL1C
TIMM22
RPS9
NDUFS3
KBTBD4
GGA1
MUC20
KAT6A
HABP2
C12orf43
KRT8
KRT18
VPS52
RPS18
PHB2
COMMD4
HERC5
ZFPL1
CDCA5
TRIM6-TRIM34
TRIM6
UBQLN1
MDGA1
MYL12A
PSMD1
SEC13
RPL23A
TARS2
IPO11
TLE3
GADD45GIP1
CASC3
ATAD2
SMG7
EIF1AD
BANF1
MAN2C1
ZNF3
MRPL21
IGHMBP2
WDR75
CEP162
HSPBP1
MED23
VGLL4
EIF3E
LZTS2
GPN1
CCDC121
MCC
VIRMA
PDCD6IP
RPS12
PHF3
SRRD
HPS4
EXOC5
AP5M1
ZNF497
PTMS
JADE2
PSMB6
ALDOA
MRM3
GLOD4
LRRC29
MAIP1
RPL7L1
DOHH
PHF12
CCDC77
KDM5A
TSR2
BAG6
APOM
TTC32
TMEM242
VILL
NUP54
TMEM69
DLC1
RBX1
GOSR1
XPNPEP3
ST13
CENPW
COPZ1
KAT5
MED4
METTL3
RBM19
MED18
TRMT61B
GPBP1
CHN2
CPVL
SDHC
NOL8
CENPP
MCM7
AP4M1
NEMF
LYRM4
FARS2
PCBP2
SLC44A2
NDUFA4
ICE1
MRPL3
IFI16
ENKUR
UBE2Q1
DHRS13
RASEF
RBM42
TINAGL1
HCAR2
FBXO11
ATP5MPL
ORMDL3
DNAH5
OBSL1
INHA
TNFAIP1
IFT20
FGD3
GABARAPL1
CENPS-CORT
CENPS
TACSTD2
FAM133B
PPP1R37
TPD52L2
TFIP11
GID4
ATPAF2
TGFB1
KDM3A
SH2B1
LRRC47
GLCCI1
UBOX5
FASTKD5
DOLPP1
LCMT2
ADAL
EXD2
NCBP2AS2
NCBP2
NUDT5
CDC123
ARL14EPL
NAMPT
ZKSCAN4
ALG10
ARL1
GSTP1
RPUSD4
FAM118B
FSCN1
GTF2H4
DNAJB12
RBM28
LONP1
CATSPERD
DSTYK
RPLP2
ANKRD22
RUVBL2
GYS1
ECH1
PNO1
ELAPOR2
MED20
BYSL
KRT17
MBD6
MRPS21
SMARCAD1
ANXA3
VPS37A
CNOT7
SLC9A1
ZFAT
RPSA
RAB24
PRELID1
RRP7A
ZNF17
TEFM
COPS4
PIK3C2B
BBS1
RPL26L1
FBXW2
ARMC1
MRPL12
MAGEA2B
MAGEA2
SLC39A7
RXRB
DGAT2
C19orf48
SSBP2
KLK6
FUT1
KIAA1217
ZNF503
ZNF581
RAE1
LIMA1
NDUFS7
TAGLN2
TXNL4B
DHX38
WDR83OS
WDR83
TTC6
FOXA1
TM4SF4
FRMPD2
GCN1
SMG5
ADPGK
TPGS1
DUT
TMPRSS13
HMGCL
PALB2
DCTN5
CEP63
ANAPC13
MTO1
RPL23
PPP6R1
TRIP4
ETV4
HAX1
HIRIP3
RCE1
MCCC1
BMF
PNPT1
ZFP36L1
ZC3HC1
CDC23
PNMT
SENP2
RPL13A
CIPC
PRDM1
CXXC4
SUPT16H
PIP4P2
ARHGAP32
ATG101
C2CD5
ZFP64
CCDC43
SDCBP2
TNPO3
LRFN4
CCAR2
ERGIC2
WDR24
PROSER1
NHLRC3
TBC1D17
AKT1S1
RPS16
MIDEAS
TP53I3
ZNF76
TOMM70
LNP1
TMEM68
TGS1
NOTCH2NLC
TRIQK
NFKBIZ
EFCAB14
BORCS7
NOTCH2
NLK
CLASRP
RPS14
CCZ1B
PSMD6
ERCC5
DDX19A
TARBP2
GABPB1
PRR12
POLD4
REXO4
MAP2K3
STAM
TSR1
PRSS22
EFTUD2
CCDC103
CBLL1
C2orf49
POLE3
C9orf43
ZNF460
PINX1
PSME3
KMT5C
PSMC3
HTRA2
RFFL
TGFBR2
MRPS10
TMEM40
MAGOH
ZFYVE26
MRPL40
HIRA
PPIH
TAF6
CNPY4
TXN
NDUFA10
LENG8
RAD52
CCDC12
PPIL3
NIF3L1
CWF19L1
RP1L1
TBL1X
AMDHD2
SCAF11
ALKBH3
CWC25
TBCK
AIMP1
POR
ZMYND8
RABL2B
SLPI
RPL21
SDHD
DHX16
CIAO3
RILPL1
NIBAN2
SCARB1
RPL26
TNRC18
FAF2
MCF2L
WASHC2A
SSBP1
RPS20
ZNF394
ALG10B
ZFP62
MTERF4
BDP1
SLC11A2
MDH1B
FASTKD2
TNFRSF12A
COMMD5
XDH
MAGOHB
SAMD4B
ZNF250
SYT12
ACP3
GRK7
MFSD3
LCN2
NAT10
ENDOV
ZNF561
LEO1
SECISBP2
PEX26
PPFIA1
FZD2
E2F6
BCL6
TRIP6
SLC30A4
PTCD1
CPSF4
COMMD1
CCT4
PMPCB
KCTD11
DGCR6L
PUF60
CTTN
IFT52
MGST2
TTPAL
VWA7
PTP4A1
FBXL18
TBCB
POLR2I
GJB5
RNF19A
SLC9A8
ACAD9
LAPTM5
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
SAR1B
PPP1R1B
PDHX
APIP
COPS8
ZNF384
MRPS18A
ZWILCH
RPL4
VBP1
TRAK1
FAM222B
UTP3
ALG14
PLEC
PSMD5
S100A2
WDR36
CCZ1
TXNDC17
KIAA0753
CYP20A1
ZNF524
FIZ1
CSTF1
AURKA
HNRNPH1
ZKSCAN2
PPFIBP2
C6orf89
UPP1
HOXA3
LPCAT3
TIPARP
PHF5A
ACO2
ATP5MC2
FGR
SUGCT
MPLKIP
KCTD5
EIF2S1
ATP6V1D
PSMG2
CEP76
MTIF2
ATR
SNRPD3
GUCD1
TMPRSS4
SRP68
FOXA2
SLCO1A2
VIPR1
DHX35
GTF2H2
C12orf73
ADPRS
CCNL1
PGGT1B
ZNF696
ZNF576
IRGQ
SERPINE1
ZCCHC3
SRRT
PLXNB2
LNPEP
SLC25A11
RNF167
SNRNP200
DNAJA3
UNC50
COA5
TMIE
ALS2CL
YJU2
GSN
SKIDA1
XPC
LSM3
PDRG1
WBP4
ELF1
FBXL19
MAD2L1BP
DDX56
FOXS1
GTPBP2
PEMT
TMEM18
NUF2
MED6
MAF1
RASSF6
SRP9
FMN1
GPANK1
CSNK2B
CHD8
HSPA9
FADD
PSMB2
VASP
SRRM3
ZNF770
TNFAIP2
PUS10
PEX13
GTF2IRD2
RGS3
ZC3H10
CYP1B1
SPRY4
ZCWPW1
MEPCE
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
TGFA
MYNN
NCOA3
COMMD2
LGALS8
SEM1
ZKSCAN5
LRP1
NAPA
PEPD
UMAD1
LRPPRC
AZIN1
MAGEA6
CYBA
SPEF1
BRMS1
CPSF1
SNAP47
JMJD4
DCP1A
DTNBP1
SHLD1
BAZ1B
BCAR3
HEATR1
ZNF749
EMC8
COX4I1
LEKR1
MRPS22
CDYL
PRR19
PAFAH1B3
TOMM40
ADCK1
STON2
AQP5
RNF187
COQ8B
SLC30A6
NUP62
IL4I1
ATF5
ZNF668
ZNF646
SH2D4A
RAB5IF
MRPS17
PWP1
NBPF1
ZNF180
IGFL4
TIMM50
SART1
SELENOH
SYS1
NADK
LRATD2
DNMT1
CLCF1
INTS12
GSTCD
SETDB1
ING5
CSF2
TFB2M
CNST
IQCG
RPL35A
TRIM35
PTK2B
CUL9
TAF9
RAD17
AK6