ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8976672 | KYSE-410
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◣ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◢ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

MTRNR2L8
MTRNR2L2
GRB7
MRPL11
TMEM199
POLDIP2
CRBN
ERAL1
TOMM22
GRHL2
RGPD2
RGPD1
POLR2J3
UBE3B
KCTD10
STARD3
SFSWAP
STAT6
MRPL45
PSMD3
PGAP3
ERBB2
GET3
MTBP
MRPL13
UNC13D
MTRNR2L9
ISY1-RAB43
ISY1
RBM48
PEX1
SLC45A4
TSR3
GNPTG
RBBP8NL
VPS50
HEPACAM2
HEXA
LZTR1
HES1
SEMA3B
GFM1
KAT8
POLR2J2
POLR2J
TXN2
SOCS2
YAP1
SLIRP
ALKBH1
UBE2I
LAMP1
PDAP1
BUD31
SUPT7L
SLC4A1AP
C1orf174
TOP3A
SMCR8
SUPT6H
SDF2
MRPS15
MOCS3
DPM1
SRI
AXL
DMAC2
ATP5MF-PTCD1
ATP5MF
NAGPA
PSMD1
TRIB1
SAP30BP
RECQL5
RPTOR
UPK3B
MRTO4
EMC1
MED6
LRRC47
THAP7
SLC25A45
RPL23A
SLC35B1
C8orf33
CCDC97
STX16
ZNF335
DDX23
TRMT2A
RANBP1
TET3
PHAX
ABCB8
NEURL2
CTSA
TAS1R1
NOL9
EIF3H
IDH3B
MIEN1
RBBP5
SALL4
SUPT4H1
CD55
SUMF1
EXOSC5
BCKDHA
NGDN
ATG14
ZNF383
RTF2
NCBP2AS2
NCBP2
ELP3
DNAJC11
PALB2
DCTN5
POLR3F
DZANK1
DOHH
PPWD1
CENPK
UBQLN1
TSFM
ZNF830
CCT6B
ZNF408
ARHGAP1
TMEM258
FEN1
PSMG2
CEP76
FAM162A
CCDC58
LRRC29
NOL8
CENPP
LTO1
LRRC46
RCE1
ZZZ3
HAGH
FAHD1
MAN2C1
C16orf91
C5orf51
KMT5B
NOM1
DDX46
ZGPAT
ARFRP1
CDKAL1
SEPTIN9
PSMB7
NDUFA2
IK
PRPF6
SART3
ISCU
TCTEX1D4
BTBD19
INO80D
STYXL1
MDH2
RPS26
PFKM
SENP1
SENP5
SPNS1
YJU2
BLOC1S1
SLC25A53
ZNF165
TATDN3
NSL1
SEC61B
SMN2
SMN1
BHLHE40
SUPV3L1
TBRG4
DIABLO
WASHC5
NSMCE2
U2SURP
ZNF2
VPS52
RPS18
UBE2M
TXNL4B
DHX38
NVL
CASC3
TMEM203
NDOR1
RIN1
CENPBD1
MDH1B
FASTKD2
TRMO
RAE1
ZNF576
IRGQ
BRWD1
BRPF1
FUT1
RAD9A
ZSCAN25
TMEM40
DPP3
MB
PFDN1
SNRPE
VIRMA
TJP2
APOBEC3H
SLC39A9
ERH
METTL2A
ZNF17
NDUFA9
AKAP3
MRPL58
BABAM1
TFPT
PRPF31
PSME3
TIMM23
TRIQK
BIRC3
CCDC174
NCAPH2
LMF2
REXO1
DERL1
OAZ3
TRUB2
COQ4
REEP4
SF3B3
COG4
SEMA5B
NR1H2
CEP162
NUP107
EPS8
OXNAD1
DPH3
MAP3K7
SLPI
PTP4A1
HUS1
RAB3IP
RNF39
FAIM
ORAI3
ZSCAN22
MAIP1
WDR53
FBXO45
MED23
THUMPD1
PPIL4
GFM2
MRPL53
CCDC124
ARMC1
NOC2L
METTL25
CCDC59
GPATCH3
CPSF1
NUP214
TRMT1
MRPS7
GGA3
DGAT2
RRNAD1
ISG20L2
TSN
BCL9
SKIL
RTEL1
WDR24
SF3A3
FAM222B
VGLL4
CBLL1
NOL10
VAC14
BMS1
ATG101
GTPBP4
RPL26L1
CCNT1
LRFN4
DNAH5
NOL11
SMPD4
MZT2B
ABT1
LAMTOR1
DDX49
COPE
FOS
SCARB1
NUP85
UBIAD1
ENOSF1
SEC13
MAPKAPK5
ERGIC2
DNAJC30
BUD23
RWDD1
CLPTM1
FAM83A
COMMD2
ZG16B
FLOT2
PRSS22
GATB
EIF2D
GCN1
MRPL3
MRPL38
FASTK
CNPY2
LGALS8
UQCRQ
GDF9
ZNF461
CDK12
NDUFB5
MRPL47
COLEC11
ALKBH3
MRPL12
PSKH1
AP5Z1
SART1
FBXW2
TRIP4
KMT5C
PPP1R37
TPD52L2
CCDC12
CDKN2AIPNL
NDUFS7
PHB2
HTRA2
ICE1
CZIB
MFN2
KRR1
ZCCHC4
MRPL21
IGHMBP2
TM4SF4
PSMD7
TIMM22
ZFYVE26
PDRG1
FADD
DOK7
SMG8
XAB2
PRR3
GNL1
TOMM6
PPFIA1
OSCAR
NDUFA3
NFKBIA
GTF2H3
EIF2B1
OBSL1
INHA
SETD3
CCNK
CDK11B
CDK11A
COPS8
VPS33A
ZBTB45
PNO1
MAF1
CGGBP1
C3orf38
MAD2L1BP
DDX41
BIRC2
GTF2IRD2
PEPD
GTF2IRD2B
FOXS1
IL1RN
ZNF507
PUS10
PEX13
KAT6A
SLC7A6OS
PRMT7
SMIM12
TMED2
TRAF4
TFAP2C
PCYT1A
ZNF256
EIF2S1
ATP6V1D
KLK6
METTL17
NOP58
MRPS11
MRPL46
INTS1
SNRPC
SNRNP200
COX16
GOLM2
DUSP6
LMAN2
DHRS3
D2HGDH
SLC24A1
TTI1
RPRD1B
TMEM123
ZFAT
ZFP62
ATF3
ATP6V1H
EFTUD2
CCDC103
TUBD1
RPS6KB1
CD63
LRATD2
TCERG1
CACTIN
COPS7B
SUGCT
MPLKIP
PEX26
PISD
VEGFA
PPAN-P2RY11
PPAN
TAGLN2
NUS1
GID8
DIDO1
SERPINH1
C5orf15
FLOT1
TIMM23B
PARG
NDUFAF5
ESF1
MAGOH
MDM4
PARP4
RARS1
PMPCB
PIK3C2B
CDK5RAP2
SRP68
GJB5
SAMM50
TBL1X
CLDN22
MCM7
AP4M1
KRT17
FAM200A
FBXL12
RAD51AP1
C12orf4
GOSR2
FOSB
CLCF1
CSTF1
AURKA
GTF3C5
TPGS1
TRIM4
CASP8
ECH1
TFIP11
ZNF142
BCS1L
EIF2B2
RRP36
PRCC
CTNNBL1
EIF1AD
BANF1
SRD5A1
NSUN2
RBM22
TMEM147
BBS1
YIPF3
POLR1C
ZNF524
FIZ1
SSNA1
ANAPC2
ADPRS
NPAS2
E2F4
COA8
BAG5
DHRS13
DGCR6L
NMNAT1
LZIC
INKA2
DDX20
SH2B1
MRPL1
RAMAC
MORF4L1
ALDH3B2
PAN2
ALDH18A1
HNRNPA2B1
CBX3
SLC39A10
GET4
WDTC1
EPC2
DDX17
EIF4G2
STRBP
NUDT3
WASHC2A
SLC25A25
NAIF1
GABARAP
SEPTIN7
KAT5
WASF2
WASHC2C
UBE2Q1
GPR137
CDK4
BAD
GSK3B
ATP6V0D1
RSF1
AAMDC
MSMO1
RPGRIP1L
FTO
DAGLA
MDM2
FAM72D
FAM72C
CUTA
RPUSD4
FAM118B
CLCN7
SMARCD2
USP49
DDX42
CCDC47
SRSF1
ILF3
MTHFR
CLCN6
SERPINI1
PDCD10
COMMD9
GBA
ATP6V1G1
MAN1B1
SLC35A5
ATG3
OSGEP
APEX1
UVRAG
FANCA
AURKAIP1
MCOLN1
XPO7
WDR74
NME1
CLN3
HPS5
GTF2H1
PAXBP1
INO80C
FAM72A
AMDHD2
MFSD1
PPP6R1
DVL2
SLC4A2
ZDHHC6
VTI1A
WWOX
ATAD2
SMG7
PMS1
ORMDL1
CCDC200
NDUFA4
SLC25A11
RNF167
PCIF1
UBE2B
CDKL3
PIP4P1
INTS10
GP1BB
E2F6
ZNF668
WBP2
SSBP1
ARHGAP32
MEMO1
UBE3C
MOB1B
MEF2C
RRP15
KANSL3
PTBP1
TNC
HNRNPH2
GLA
ITGB3BP
EFCAB7
KCNMA1
UBAP2L
C1orf43
PASD1
USP30
WDR62
THAP8
TPP1
LIMA1
SUMO3
SH3GL1
SLC33A1
THRAP3
LANCL2
CLSTN1
EIF5A2
ST7
DHX35
ANKS6
HM13
SPATC1L
DAZAP1
MIER1
SUSD4
XRCC5
TBC1D30
GNS
SLK
ADGRB3
DENR
LPCAT3
VWA7
FGGY
TMEM116
ERP29
ADGRL1
ALG6
SHLD2
GLUD1
VPS11
SUMO2
NUDCD3
NOP16
HIGD2A
AAAS
SCAMP5
LSG1
DICER1
ZNF497
ADAM23
PLAGL1
BAX
OTUD7A
TNPO3
KDM3A
PDE4DIP
RXRA
GPRC5A
ARID5B
RMND1
ARMT1
FSCN1
EIF3F
PSMD5
FAM72B
SMARCA4
METTL1
EEF1AKMT3
SPHK2
RPL18
STX6
NDUFAB1
KRT80
PRMT3
RABGAP1L
QRICH1
SERP1
KDM1A
EIF2A
SYNCRIP
BLOC1S4
RALGDS
NPEPPS
ATP6V1C1
STAU2
STRA6
HDAC6
MYCL
BAG6
APOM
ACVR1B
NEXN
PDCD6IP
RRAGC
TMEM18
SBK1
LARP1
SCYL3
PRAME
AP2A2
PPP5D1
NSD1
CALM3
KDM4C
TTC32
RBM39
TMEM59
TCEANC2
MYL12A
TFDP1
HOOK2
CHMP7
UBE2L3
FEM1A
GRHL1
ZNF33B
HOXC13
PRKCA
LUC7L2
GTF2H4
CAPRIN2
SFXN1
KLHL12
MAN2A2
KDSR
PEAK1
HMG20A
NFU1
KDM7A
NUF2
NAPA
METTL2B
NSF
BNIP1
RNASEK
LRRC23
SAP30
BACH2
FLYWCH1
TM2D2
ADAM9
HSPA9
CBX7
RPS11
FBXL3
DIP2A
AFF4
NOTCH2NLC
MINDY2
DNAJB12
RPS14
JMJD1C
CHD7
WWP1
USP28
FASN
UBE2E2
AIFM1
CACNA2D2
SPTAN1
HSPBP1
S100A2
FAM133B
RFX1
ETV4
PLEKHF2
FMC1-LUC7L2
FMC1
RCHY1
GABRR1
WBP1L
SYT7
ACTN4
TSC1
GFI1B
TTC31
CCDC142
BRIX1
RBPJ
DTNB
PHF21A
CFAP206
KMT2D
URM1
CUTC
COX15
SNX16
C17orf58
UTP3
RPL5
PRKCE
ZNF609
MSS51
COASY
ZNF3
DNPEP
FCHSD2
PTK2
PATZ1
C1QTNF1
MAP3K1
MARCHF2
CCAR2
IKZF2
PHIP
FAM98B
COMMD4
TBL3
ZC3HC1
TIMM50
MINK1
IFT140
CRAMP1
TMEM242
IGF1R
REXO4
PTPN12
ATXN7L2
GOLGA3
PES1
RBKS
BABAM2
EIF4A2
ZMPSTE24
LASP1
UBXN2A
FRMPD1
PXT1
KCTD20
TAOK1
NFASC
KLHL32
CHD1
NDUFB3
FAM126B
CCNI
BSG
PSMA1
FZR1
USF2
CSTF2
TARS2
TMEM167B
UPF1
CRKL
ATXN7L3
ZBTB18
CHIC2
RPS9
SCAF11
MED1
EIF4H
OPA1
TMEM41A
CHRM3
OAZ1
ADCY9
ZNF292
TIPARP
PKP2
PTPRG
LYPLAL1
CMIP
TEFM
IRF2BP2
SPRTN
EXOC8
ELAPOR2
PPP2R5A
LCOR
EFNA3
BHLHB9
SLX4IP
MTIF2
COLEC12
SGO1
KLHL22
NOTCH2NLB
NOTCH2NLA
LYPLA1
CFAP36
CABIN1
ERCC6L2
MELK
EVPLL
ZBTB14
TM9SF4
ARMC8
ZNF217
CCDC88A
VILL
SRSF11
AUTS2
RBM14-RBM4
RBM14
PVALEF
AATK
ALG14
C12orf66
SYT12
MED20
BYSL
MAZ
HEMK1
GTF2A1
GFER
AMOTL1
GAB2
GSDMD
HERC5
RPL7L1
RPS12
IQCG
CHEK1
COMMD8
NFE2
MAST2
MRFAP1
GNB1
SRSF6
SGTA
PKNOX1
SREK1IP1
RYK
CWC27
ELP5
CTDNEP1
TENT2
PDE12
CTBP1
YTHDF2
STAT5B
LIFR
PTBP3
MRPL27
EME1
MRPS33
MLLT10
SPPL3
C19orf48
THAP1
NDUFS3
KBTBD4
DUS2
DDX28
RBM19
MAPKAPK3
COPS4
BRF2
CACYBP
TJP3
CBWD5
RBM28
MRPL48
SSBP2
UBXN4
PHF3
ZRANB2
GRWD1
SLC35A4
APBB3
SYT1
PARD6B
TRAPPC2L
GALNS