ChIP-Atlas: Target genes

Potential target genes for HDAC3

Query protein: HDAC3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10045307 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HDAC3's Target genes

◢ HDAC3: Average

◢ SRX5930120: Acute myeloid leukemia

◢ SRX5930121: Acute myeloid leukemia

◢ SRX017705: CD4+ T cells

◢ SRX5457145: K-562

◢ SRX5457146: K-562

◢ SRX8976672: KYSE-410

◢ SRX8976673: KYSE-410

◢ SRX8976674: KYSE-410

◢ SRX8976675: KYSE-410

◢ SRX8976676: KYSE-410

◢ SRX8976677: KYSE-410

◢ SRX8976678: KYSE-410

◢ SRX8976680: KYSE-410

◢ SRX10045306: LNCAP

◣ SRX10045307: LNCAP

◢ SRX3401278: MCF-7

◢ SRX3401281: MCF-7

◢ SRX2140209: MM.1S

◢ SRX5930140: RH-4

◢ SRX5930141: RH-4

◢ SRX059713: VCaP

◢ SRX059714: VCaP

◢ HDAC3: STRING

GET4
HEXA
UBE2Q1
CDK4
CUTA
AP5Z1
ILF3
HPS5
GTF2H1
UVRAG
LAMP1
KAT5
OSGEP
APEX1
RPL5
SPATC1L
WASHC2C
ATP6V0D1
WASHC2A
MTHFR
CLCN6
PGK1
COMMD9
CTDP1
SPNS1
YJU2
TRMO
THRAP3
PIP4P1
WDR62
THAP8
KDM4C
NDUFS7
EIF2S1
ATP6V1D
TOR1AIP1
UBE2B
CDKL3
RPUSD4
FAM118B
HOOK2
CHMP7
CCDC90B
CLN3
DVL2
HDAC2
TPR
ODR4
MED11
SMG7
PLAA
IFT74
RNASEK
CSDE1
TMEM259
TPP1
LTA4H
HAGH
FAHD1
C8orf37
UBAP2
FNTB
FEM1A
FBXL19
CDCA3
CACYBP
PIK3R3
ZNF672
AFF4
DUS3L
LARS1
PPRC1
ARF4
FANCF
CEP162
OXNAD1
DPH3
GBA
PDE4DIP
GSTA4
PDXDC1
ATL1
MAP4K5
MSL2
SLX1B
SLX1A
BOLA2B
BOLA2
RPS29
RAD9A
QTRT2
CCDC191
SHC1
CKS1B
VPS33A
MTF2
NME1
NUF2
PRKCI
STX5
MLH1
EPM2AIP1
MTRNR2L2
MMADHC
THG1L
PHLPP1
KLHL12
SLC35A4
APBB3
RFXANK
BORCS8-MEF2B
BORCS8
RPLP2
TMEM116
ERP29
CHD1
ATP5MC2
VEZT
FGD6
GABPA
ATP5PF
CDIP1
GTPBP8
GOLM2
TMED4
GOSR2
HACD2
USPL1
HMGB1
SLC38A7
NSUN4
EFHC1
PRORP
PPP2R3C
EED
CEP70
USP35
KCTD21
ALG14
ZSCAN22
CUL5
RPS27
TFPT
PRPF31
BAG6
APOM
B9D1
ISY1-RAB43
ISY1
SNRPE
ZMPSTE24
FRMPD1
TIMM17A
GLIPR1L2
TIMM10B
SESN1
CEP57L1
DHX35
RPL27
BOLA2-SMG1P6
SLC35A5
ATG3
PAXBP1
EIF2AK3
CBWD5
CBWD3
CCDC146
LAMTOR5
CLSTN1
CDK19
AMD1
PMVK
PPIP5K2
TSACC
CCT3
C5orf51
NCBP2AS2
NCBP2
PCYT1A
UBQLN1
METTL1
EEF1AKMT3
SLC33A1
PIGO
CPEB4
UBAP2L
C1orf43
CYCS
CCT2
ESCO1
TIMM13
TUFT1
HSPA5
TIMM22
AATF
NUDT15
USE1
TMEM242
ACAD9
H4C14
H4C15
VCPIP1
C8orf44-SGK3
TTI2
C16orf91
GFM2
CCNL1
SP2
TOGARAM1
KLHL28
DBT
IDE
RFX1
TM9SF4
FUS
UFSP2
INTS8
ATP5MF-PTCD1
ATP5MF
INTS7
DTL
TASP1
TNFRSF19
SLC35B1
ARL14EP
PRMT2
HOXC13
SIRT4
NCSTN
COPA
MFSD1
TTC32
RCHY1
MRPL54
ZNF140
DAD1
METTL25
CCDC59
PPOX
WDR36
ATP6V1G1
BHLHB9
IQCG
EIF3E
WARS2
LMLN
PMF1-BGLAP
PMF1
BMS1
AP2B1
SRPRB
BNIP3L
GBE1
SCAF11
TIPARP
C10orf88
DUSP12
SUPV3L1
RAB5B
VHL
PDCL3
PEF1
MTBP
MRPL13
C12orf66
RINT1
CLTC
EIF4G2
CLPB
KRTAP10-6
TBRG4
PPP2R5A
SEC31A
ARIH1
MAPKBP1
RPS26
RPL21
OXSR1
DCAF8
GOLGB1
SPG11
MRPL45
STMP1
M6PR
KLRG1
SKA3
MRPL57
PRCC
ORC4
MBD5
STAM
SMIM4
NEURL2
CTSA
CBWD6
HSPH1
TMX2
MED19
ZCCHC7
SF3A3
SERF2
EIF3F
KLHL32
NDUFAF4
SLC35E2B
TESK1
ABHD14B
ABHD14A-ACY1
ABHD14A
RPL22L1
EEF1AKNMT
EXD1
CHP1
PSMC4
WDR89
NFX1
FIS1
NDUFA6
EIF3L
ANKRD54
COX16
DARS2
CENPL
PPP2R1A
ECH1
SMIM13
TVP23B
INO80C
UFD1
CDC45
ATG5
MOK
GTF2H2
SRP9
C17orf97
GTF2H4
TMEM39A
N4BP2L2
ORC2
OSCP1
SMN2
SMN1
CHEK1
SRFBP1
TMED10
LOC101928764
EID1
MYH7B
GSS
FBXL18
KAT7
TTC37
ARSK
PDE12
NUP214
SSBP1
DDX18
RFC2
CEP350
LUC7L2
FMC1-LUC7L2
FMC1
RRM1
MRPS7
GGA3
HMGB2
SETD4
RETSAT
ELMOD3
MTRNR2L8
MRPL11
GRB7
ALDH18A1
HNRNPA2B1
CBX3
SLC39A10
WDTC1
SLC45A4
EPC2
DDX17
STRBP
NUDT3
TMEM199
POLDIP2
SLC25A25
NAIF1
GABARAP
SEPTIN7
WASF2
ERAL1
SFSWAP
GPR137
BAD
POLR2J3
GSK3B
NAGPA
RSF1
AAMDC
MSMO1
CRBN
RBBP8NL
UBE3B
KCTD10
RGPD2
RGPD1
RPGRIP1L
FTO
RBM48
PEX1
MTRNR2L9
GRHL2
PSMD3
DAGLA
MDM2
FAM72D
FAM72C
SUMF1
SKIL
RAE1
STARD3
C8orf33
TOMM22
CLCN7
SMARCD2
USP49
C1orf174
SUPT7L
SLC4A1AP
DDX42
CCDC47
SRSF1
TBL1X
TRIB1
POLR3F
DZANK1
SOCS2
RBBP5
HES1
SERPINI1
PDCD10
STX16
ZZZ3
STAT6
TSR3
GNPTG
LZTR1
VPS50
HEPACAM2
MAN1B1
THAP7
UNC13D
BHLHE40
PGAP3
ERBB2
MIEN1
ZNF335
POLR2J
TRMT2A
RANBP1
IDH3B
PSMB7
SUPT6H
SDF2
FANCA
CLPTM1
AURKAIP1
MCOLN1
BLOC1S1
DMAC2
VIRMA
TET3
SALL4
WASHC5
NSMCE2
ATF3
ZNF408
ARHGAP1
MOCS3
DPM1
XPO7
WDR74
SLC25A53
MRTO4
EMC1
PDAP1
BUD31
SRI
YAP1
POLR2J2
TSFM
GET3
TOP3A
SMCR8
PFKM
SLC25A45
CDKAL1
FAM72A
CASC3
AMDHD2
SAP30BP
RECQL5
TRMT1
SLIRP
ALKBH1
FLOT2
PPP6R1
DOK7
U2SURP
ZNF165
ZNF383
SENP1
AXL
CDK12
ZSCAN25
TAS1R1
NOL9
SLC4A2
FLOT1
ZDHHC6
VTI1A
GATB
ZBTB45
WWOX
DDX41
ATAD2
NDUFA2
IK
EIF2D
GFM1
PMS1
ORMDL1
KRR1
CCDC200
RTF2
NDUFA4
VAC14
SLC25A11
RNF167
PCIF1
MRPS15
KAT8
FAM83A
PHAX
DNAJC11
RAD51AP1
C12orf4
INTS10
GP1BB
E2F6
ZNF576
IRGQ
ZNF668
WBP2
ARHGAP32
MEMO1
UBE3C
NUP107
CCDC97
MOB1B
SUPT4H1
MEF2C
UBE2I
HUS1
RRP15
NGDN
CCNT1
KANSL3
PTBP1
PSME3
TRIP4
TNC
HNRNPH2
GLA
ITGB3BP
EFCAB7
SEMA3B
KCNMA1
PASD1
USP30
PPWD1
CENPK
TRAF4
TJP2
LIMA1
BIRC3
SUMO3
SH3GL1
GPATCH3
LANCL2
SEPTIN9
ATG14
EIF5A2
ST7
RPTOR
ANKS6
ELP3
EPS8
HM13
ZNF2
DAZAP1
MIER1
TXN2
SUSD4
XRCC5
TBC1D30
GNS
PSMD1
SLK
LRRC29
CACTIN
ADGRB3
DENR
LPCAT3
DHRS13
VWA7
FGGY
RTEL1
MRPS11
MRPL46
MAP3K7
ADGRL1
ALG6
SHLD2
GLUD1
VPS11
SUMO2
NUDCD3
ABCB8
NOP16
HIGD2A
AAAS
SCAMP5
LSG1
OAZ3
TIMM23
TSN
DICER1
ZNF497
ADAM23
DUSP6
DDX23
PLAGL1
BAX
OTUD7A
FAIM
TNPO3
ZNF524
KDM3A
FIZ1
LMAN2
RXRA
SH2B1
NOL8
CENPP
TRUB2
GPRC5A
COQ4
ARID5B
RMND1
ARMT1
FSCN1
ZCCHC4
PSMD5
REEP4
FAM72B
TMEM40
SMARCA4
EIF1AD
DPP3
BANF1
SPHK2
RPL18
DDX46
STX6
ZNF507
NDUFAB1
KRT80
DNAJC30
BUD23
PRMT3
RABGAP1L
QRICH1
DHRS3
SERP1
KDM1A
EIF2A
SYNCRIP
BLOC1S4
LTO1
RALGDS
NPEPPS
ATP6V1C1
STAU2
STRA6
HDAC6
MYCL
PUS10
PEX13
ACVR1B
NEXN
METTL2A
PDCD6IP
SART3
RRAGC
ISCU
DGAT2
TMEM18
SBK1
UPK3B
TMEM203
NDOR1
LARP1
SMG8
NFKBIA
SCYL3
PRAME
AP2A2
ZGPAT
PPP5D1
NSD1
CALM3
ARFRP1
KMT5B
RBM39
TMEM59
TCEANC2
TFAP2C
MAIP1
MAN2C1
MYL12A
TFDP1
ZNF830
CCT6B
STYXL1
MDH2
UBE2L3
GRHL1
ZNF33B
NDUFB5
MRPL47
PRKCA
FOS
CAPRIN2
SFXN1
EIF3H
LRFN4
BRPF1
PSMG2
CEP76
MAN2A2
KDSR
PEAK1
HMG20A
NFU1
KDM7A
CENPBD1
NAPA
METTL2B
NSF
BNIP1
LRRC23
SAP30
NVL
BACH2
FLYWCH1
DNAH5
TM2D2
ADAM9
HSPA9
CBX7
ATP6V1H
RPS11
FBXL3
DIP2A
INTS1
NOTCH2NLC
MINDY2
DNAJB12
RPS14
JMJD1C
CHD7
CSTF1
AURKA
WWP1
LRRC46
USP28
FASN
UBE2E2
SF3B3
COG4
AIFM1
SLC24A1
CACNA2D2
SPTAN1
HSPBP1
RAB3IP
S100A2
FAM133B
VPS52
RPS18
ETV4
SEC13
PLEKHF2
COPS7B
GABRR1
GTF2H3
EIF2B1
ABT1
CCDC174
WBP1L
GTF3C5
PRPF6
SYT7
SUGCT
MPLKIP
ACTN4
WDR53
TSC1
GFI1B
FBXO45
TTC31
CCDC142
BRIX1
RBPJ
DTNB
XAB2
PHB2
PHF21A
FAM222B
CFAP206
KMT2D
SSNA1
ANAPC2
URM1
CUTC
COX15
SNX16
PRR3
GNL1
C17orf58
MB
UTP3
PRKCE
ZNF609
MSS51
MRPL1
COASY
ZNF17
ZNF3
DNPEP
RWDD1
FAM162A
COMMD2
CCDC58
ATG101
FCHSD2
PTK2
BIRC2
PATZ1
C1QTNF1
RPL23A
MAP3K1
MARCHF2
CCAR2
IKZF2
PHIP
FAM98B
COMMD4
TBL3
GCN1
ZC3HC1
TIMM50
MINK1
IFT140
CRAMP1
NDUFA9
AKAP3
IGF1R
REXO4
KAT6A
PTPN12
LRRC47
ATXN7L2
GOLGA3
PES1
RBKS
BABAM2
MED23
TRIQK
RCE1
MRPL21
IGHMBP2
EIF4A2
EXOSC5
BCKDHA
LASP1
LAMTOR1
CNPY2
UBXN2A
PXT1
KCTD20
TAOK1
NFASC
NDUFB3
FAM126B
CD55
CCNI
BSG
PSMA1
FZR1
MAPKAPK5
PNO1
USF2
CSTF2
TARS2
TMEM167B
PRSS22
GTF2IRD2
UPF1
CRKL
ATXN7L3
TCERG1
DIABLO
ZBTB18
ERGIC2
CHIC2
TAGLN2
RPS9
MED1
EIF4H
COLEC11
OPA1
TMEM41A
CHRM3
PMPCB
OAZ1
ADCY9
ZNF292
PKP2
PTPRG
LYPLAL1
CMIP
TEFM
OBSL1
IRF2BP2
INHA
SPRTN
EXOC8
REXO1
ELAPOR2
VGLL4
KMT5C
LCOR
EFNA3
ALKBH3
SLX4IP
MTIF2
COLEC12
SGO1
PPP1R37
KLHL22
NOTCH2NLB
NOTCH2NLA
MAGOH
LYPLA1
CFAP36
CABIN1
SEMA5B
ERCC6L2
MELK
EVPLL
ZBTB14
ARMC8
ZNF217
CCDC88A
VILL
SRSF11
TXNL4B
DHX38
AUTS2
RBM14-RBM4
RBM14
PVALEF
AATK
SYT12
MED20
BYSL
TIMM23B
PARG
ORAI3
MAZ
HEMK1
GTF2A1
GFER
NCAPH2
LMF2
AMOTL1
GAB2
GSDMD
HERC5